| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825426
Identifier: 157825426
GI number: 157825426
Start: 304742
End: 306343
Strand: Direct
Name: 157825426
Synonym: A1C_01635
Alternate gene names: NA
Gene position: 304742-306343 (Clockwise)
Preceding gene: 157825425
Following gene: 157825427
Centisome position: 24.75
GC content: 27.4
Gene sequence:
>1602_bases ATGAAAATACGATTTATTATAATAAGTTTTATATCTCTAATCTTAGTGGGATGGGGATATGCTGCCTATAAATTTGAACA TCAAAGTAAAGAGAATATTATCTCTATTCTTGATGAATACGGGGAATATATAGCCTATGATTCAATAAAAGTTAATAAAT ATAGATTTAGCGTTACTTTAAATAAGGTGATGTTAAGACCTATAGATTTTTATTTTGATGAAATAGTTATTAGGCATATA CCATTTTTAAATATTACAAAAATTGATTCTTACGGTAATAATGTGAAAATTACCACCGCTCAAGATGAAAAAAATATTTT TTACTCACCTGATCATCATACGACAATTTGGTTTAGAAAATCTTTATTTAATAGAGAACCTGGTTATTGGAAATTAAGCT TGAGTGATAATAAATCAACTCTTTATAGTTCTTTAGATGCAGAAAAATTAGCAGAAAGTGATATTAGCAATTCTATAATT ACTAATACTAAAACATCGGATAACCTGAATTTGTTAATTTTGGATAGAAAAAATACTGTTTCTTTTATTTCTGAAAATTA CAGAAGAAGTTTATATGATAAAATTTTTGAATTTTTTGGAGATAAGATAGCTAATGACTCTGATACTGCTTCCTTTGAGT ATGGTTTGACAAAGTTAGATATATTGAATTTACCTATTGCTTATAATTCCAAATTAAAACTAAAATATAGTGATGAGTTA GTAGCTCTTGGGAAATTATTAATTCAAAACTTTTTGCTAAATCAAAAGCAAGAGGAAAATATGCATTCTGTTATTTTTAT GCAGATGTTAGGAGAATTAGTAAAAGGTAGACCGTTTTTATTCTTTTGCGATATTGAAAGAAAAGGAAAAGTAGAAAGTA ATTCATATAAATTAAATATAGACAAAGATAAAATTTTTGATTTTGCTTTAAATATTAAATATACTGTAGAACCTTCTGAA ACATACGAAAAAACGGCAGTTGAAGTTTTAGGAAGTTACTTTAGTAATGGTTTAAACAAAAGAGCTGAGTTAGATAACAA TTTTAAACTGACTAGCCCTATTACTCAAGAAGACGGGGAAAAAGTAATGGGTGTTTTTGCAAAAATAAATAATTCCGAAT TTAATTTAAAAGGTGAGTTTGATCCTGAAGCAAAAAAATTATCCGGTAAAACTAATCTTGTAATGGATGATTTTAATTTT GCTATTGATATTGATATGCCTCATTTAGATAATCCTTTGATGCTCGAAAGTGTAATAAAATTATCGGATCCAAATGTGTT TATAAATAATTTTGTGCATTATACCGATAATGCCGTAATACCTGTGCTTAATAAAATAGAAGATTCTAAGGCATTTGCTT TAAAGCTAGGAAAACAATCTTCAGTAATAAAGCAATACGGTTTTAGAGCTATAGAAGCTTTTAGTAAAAATTCTGAATTA AAAGACGGTGAATCTTTAGTAGTTGATGTAAAAAGTAAAGACGCCGTGCTAACTTTTAACGATAGAGCTATTGATCAGAT CCTTAGTGATGCAAGAGTATTAGAATTTATGAATGCCATGGTTATGATAGATCAAGAAAGAAAACAGTTGGTCGGTAAAT AA
Upstream 100 bases:
>100_bases CTAGTTAGCAAGCCACGGGGTGGCCATTGTGGTTTAATTATCAACGCGGGAATGACATAAGAGAATTCTTGATTTTTAAT AGTTTTTTACAGTAAAAAAT
Downstream 100 bases:
>100_bases AGTATTGTGCAGTGCGAGAAATTGTCATCCCGTGGTTTGACTCACTGGATGACAGCGGATTGTTTAAGAATCATATCGGC AACGTCTAAAATAGAAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MKIRFIIISFISLILVGWGYAAYKFEHQSKENIISILDEYGEYIAYDSIKVNKYRFSVTLNKVMLRPIDFYFDEIVIRHI PFLNITKIDSYGNNVKITTAQDEKNIFYSPDHHTTIWFRKSLFNREPGYWKLSLSDNKSTLYSSLDAEKLAESDISNSII TNTKTSDNLNLLILDRKNTVSFISENYRRSLYDKIFEFFGDKIANDSDTASFEYGLTKLDILNLPIAYNSKLKLKYSDEL VALGKLLIQNFLLNQKQEENMHSVIFMQMLGELVKGRPFLFFCDIERKGKVESNSYKLNIDKDKIFDFALNIKYTVEPSE TYEKTAVEVLGSYFSNGLNKRAELDNNFKLTSPITQEDGEKVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNF AIDIDMPHLDNPLMLESVIKLSDPNVFINNFVHYTDNAVIPVLNKIEDSKAFALKLGKQSSVIKQYGFRAIEAFSKNSEL KDGESLVVDVKSKDAVLTFNDRAIDQILSDARVLEFMNAMVMIDQERKQLVGK
Sequences:
>Translated_533_residues MKIRFIIISFISLILVGWGYAAYKFEHQSKENIISILDEYGEYIAYDSIKVNKYRFSVTLNKVMLRPIDFYFDEIVIRHI PFLNITKIDSYGNNVKITTAQDEKNIFYSPDHHTTIWFRKSLFNREPGYWKLSLSDNKSTLYSSLDAEKLAESDISNSII TNTKTSDNLNLLILDRKNTVSFISENYRRSLYDKIFEFFGDKIANDSDTASFEYGLTKLDILNLPIAYNSKLKLKYSDEL VALGKLLIQNFLLNQKQEENMHSVIFMQMLGELVKGRPFLFFCDIERKGKVESNSYKLNIDKDKIFDFALNIKYTVEPSE TYEKTAVEVLGSYFSNGLNKRAELDNNFKLTSPITQEDGEKVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNF AIDIDMPHLDNPLMLESVIKLSDPNVFINNFVHYTDNAVIPVLNKIEDSKAFALKLGKQSSVIKQYGFRAIEAFSKNSEL KDGESLVVDVKSKDAVLTFNDRAIDQILSDARVLEFMNAMVMIDQERKQLVGK >Mature_533_residues MKIRFIIISFISLILVGWGYAAYKFEHQSKENIISILDEYGEYIAYDSIKVNKYRFSVTLNKVMLRPIDFYFDEIVIRHI PFLNITKIDSYGNNVKITTAQDEKNIFYSPDHHTTIWFRKSLFNREPGYWKLSLSDNKSTLYSSLDAEKLAESDISNSII TNTKTSDNLNLLILDRKNTVSFISENYRRSLYDKIFEFFGDKIANDSDTASFEYGLTKLDILNLPIAYNSKLKLKYSDEL VALGKLLIQNFLLNQKQEENMHSVIFMQMLGELVKGRPFLFFCDIERKGKVESNSYKLNIDKDKIFDFALNIKYTVEPSE TYEKTAVEVLGSYFSNGLNKRAELDNNFKLTSPITQEDGEKVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNF AIDIDMPHLDNPLMLESVIKLSDPNVFINNFVHYTDNAVIPVLNKIEDSKAFALKLGKQSSVIKQYGFRAIEAFSKNSEL KDGESLVVDVKSKDAVLTFNDRAIDQILSDARVLEFMNAMVMIDQERKQLVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61300; Mature: 61300
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRFIIISFISLILVGWGYAAYKFEHQSKENIISILDEYGEYIAYDSIKVNKYRFSVTL CEEEEEHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHCCEEEECCEEEEEEEEEEEE NKVMLRPIDFYFDEIVIRHIPFLNITKIDSYGNNVKITTAQDEKNIFYSPDHHTTIWFRK EHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEEEH SLFNREPGYWKLSLSDNKSTLYSSLDAEKLAESDISNSIITNTKTSDNLNLLILDRKNTV HHCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCHH SFISENYRRSLYDKIFEFFGDKIANDSDTASFEYGLTKLDILNLPIAYNSKLKLKYSDEL HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCEEEEEEECCEEECCEEEEEECCHH VALGKLLIQNFLLNQKQEENMHSVIFMQMLGELVKGRPFLFFCDIERKGKVESNSYKLNI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE DKDKIFDFALNIKYTVEPSETYEKTAVEVLGSYFSNGLNKRAELDNNFKLTSPITQEDGE CHHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCH KVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNFAIDIDMPHLDNPLMLESVIK HHEEEEEEECCCEEEEECCCCCHHHHCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHH LSDPNVFINNFVHYTDNAVIPVLNKIEDSKAFALKLGKQSSVIKQYGFRAIEAFSKNSEL CCCCCEEEECEEEECCCEEEHHHHHCCCCCEEEEEECCCHHHHHHHCHHHHHHHCCCCCC KDGESLVVDVKSKDAVLTFNDRAIDQILSDARVLEFMNAMVMIDQERKQLVGK CCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEECHHHHHCCC >Mature Secondary Structure MKIRFIIISFISLILVGWGYAAYKFEHQSKENIISILDEYGEYIAYDSIKVNKYRFSVTL CEEEEEHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHCCEEEECCEEEEEEEEEEEE NKVMLRPIDFYFDEIVIRHIPFLNITKIDSYGNNVKITTAQDEKNIFYSPDHHTTIWFRK EHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEEEH SLFNREPGYWKLSLSDNKSTLYSSLDAEKLAESDISNSIITNTKTSDNLNLLILDRKNTV HHCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCHH SFISENYRRSLYDKIFEFFGDKIANDSDTASFEYGLTKLDILNLPIAYNSKLKLKYSDEL HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCEEEEEEECCEEECCEEEEEECCHH VALGKLLIQNFLLNQKQEENMHSVIFMQMLGELVKGRPFLFFCDIERKGKVESNSYKLNI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE DKDKIFDFALNIKYTVEPSETYEKTAVEVLGSYFSNGLNKRAELDNNFKLTSPITQEDGE CHHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCH KVMGVFAKINNSEFNLKGEFDPEAKKLSGKTNLVMDDFNFAIDIDMPHLDNPLMLESVIK HHEEEEEEECCCEEEEECCCCCHHHHCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHH LSDPNVFINNFVHYTDNAVIPVLNKIEDSKAFALKLGKQSSVIKQYGFRAIEAFSKNSEL CCCCCEEEECEEEECCCEEEHHHHHCCCCCEEEEEECCCHHHHHHHCHHHHHHHCCCCCC KDGESLVVDVKSKDAVLTFNDRAIDQILSDARVLEFMNAMVMIDQERKQLVGK CCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA