| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825417
Identifier: 157825417
GI number: 157825417
Start: 295270
End: 295749
Strand: Direct
Name: 157825417
Synonym: A1C_01590
Alternate gene names: NA
Gene position: 295270-295749 (Clockwise)
Preceding gene: 157825414
Following gene: 157825418
Centisome position: 23.99
GC content: 33.96
Gene sequence:
>480_bases ATGGAAGCCGGATACTTGGATATGGTAGCATTTTTACTTGAAAATGGCTCTGATCTTCATTTACAGGGAATGGAAAATTT TCTCTTGTTTAGAGCAACAGTTGTTCTAAACAGAAATGTAGTCATGGTAGCTAAATTGCTTGCTTATGGTGCTAATATGG AAGATACCATATTTGAAAGGTTAACGTATTTAAGTAAAGATCTTTGGATTCAGACTCTGCAGGATAAACAACATAAAATA GATATGATAAAAGTATTTTTACAATACGGTGCTAATCCAGATGTGGTGTATTCTAACGGTCAAATGATCAAGGATATTGA AGCAGTGTATGAACCTATGAGAGCACTTTTAACGTTTGAAGCTGCATTTCGTCGGAATGATGACAAGGGAATTAAGGTTA TTGACAAGAAAGATTTAGCAGCATTTATTCAATGGAAATCAGAAATATGGCCGGTTATAAAAGATATTTCTAAGGATTAG
Upstream 100 bases:
>100_bases GTGTAAGAAGAATCAGAAAAAGATAGGCAATCTTTTACTTGACAAAGGAGTGGATATAAAATTGAGTAATAATTATTGTA ACACACCTTTGTATAGTGCT
Downstream 100 bases:
>100_bases TATATTAAAAGTTTATTAGAGCTGACTACATTTTCAAAACAAGTGAAATTGGGTTGGGATGATTCTATAGAACAATTGCT AATAAAATTAAGAGAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEAGYLDMVAFLLENGSDLHLQGMENFLLFRATVVLNRNVVMVAKLLAYGANMEDTIFERLTYLSKDLWIQTLQDKQHKI DMIKVFLQYGANPDVVYSNGQMIKDIEAVYEPMRALLTFEAAFRRNDDKGIKVIDKKDLAAFIQWKSEIWPVIKDISKD
Sequences:
>Translated_159_residues MEAGYLDMVAFLLENGSDLHLQGMENFLLFRATVVLNRNVVMVAKLLAYGANMEDTIFERLTYLSKDLWIQTLQDKQHKI DMIKVFLQYGANPDVVYSNGQMIKDIEAVYEPMRALLTFEAAFRRNDDKGIKVIDKKDLAAFIQWKSEIWPVIKDISKD >Mature_159_residues MEAGYLDMVAFLLENGSDLHLQGMENFLLFRATVVLNRNVVMVAKLLAYGANMEDTIFERLTYLSKDLWIQTLQDKQHKI DMIKVFLQYGANPDVVYSNGQMIKDIEAVYEPMRALLTFEAAFRRNDDKGIKVIDKKDLAAFIQWKSEIWPVIKDISKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18384; Mature: 18384
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAGYLDMVAFLLENGSDLHLQGMENFLLFRATVVLNRNVVMVAKLLAYGANMEDTIFER CCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH LTYLSKDLWIQTLQDKQHKIDMIKVFLQYGANPDVVYSNGQMIKDIEAVYEPMRALLTFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH AAFRRNDDKGIKVIDKKDLAAFIQWKSEIWPVIKDISKD HHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEAGYLDMVAFLLENGSDLHLQGMENFLLFRATVVLNRNVVMVAKLLAYGANMEDTIFER CCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH LTYLSKDLWIQTLQDKQHKIDMIKVFLQYGANPDVVYSNGQMIKDIEAVYEPMRALLTFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH AAFRRNDDKGIKVIDKKDLAAFIQWKSEIWPVIKDISKD HHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA