| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825395
Identifier: 157825395
GI number: 157825395
Start: 269047
End: 269262
Strand: Direct
Name: 157825395
Synonym: A1C_01445
Alternate gene names: NA
Gene position: 269047-269262 (Clockwise)
Preceding gene: 157825394
Following gene: 157825396
Centisome position: 21.85
GC content: 36.57
Gene sequence:
>216_bases ATGTTCTCTAGTGCTGCTGGTGATGAAGATGAAAGAGTGTCAGATCATGATATTTTGGTTGCAAGTACTATTGCAATCGG TACATATAAGAATAATAATTATAGCGTTGCAATCTTATTAAGTTATAATCATCTTATGAATGGCGGTATTACTCTTACTC CAAATCTTGGGATCAGATACGGTTGCTTCGAAAGACGGCACCTCCCAAGAAAGTAA
Upstream 100 bases:
>100_bases ATGCACTTTTTATAAATATGGAAAATATGTTAAATGAGCAATATATAATTCTATTCATGATATTATCACGCAAATGAACC GCAATGTTATATCGCATAGA
Downstream 100 bases:
>100_bases TGTAGGTATTCAGCATTTGAGTATTGTTTCTAAAAAGCAGCATTTATGCAGCGGTATTTTAGGCGGTAGTGTAGCTTGAG CACCGGCAAATAGCTGAAGG
Product: cell surface antigen-like protein Sca8
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MFSSAAGDEDERVSDHDILVASTIAIGTYKNNNYSVAILLSYNHLMNGGITLTPNLGIRYGCFERRHLPRK
Sequences:
>Translated_71_residues MFSSAAGDEDERVSDHDILVASTIAIGTYKNNNYSVAILLSYNHLMNGGITLTPNLGIRYGCFERRHLPRK >Mature_71_residues MFSSAAGDEDERVSDHDILVASTIAIGTYKNNNYSVAILLSYNHLMNGGITLTPNLGIRYGCFERRHLPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7899; Mature: 7899
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSAAGDEDERVSDHDILVASTIAIGTYKNNNYSVAILLSYNHLMNGGITLTPNLGIRY CCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEECCCCCEEE GCFERRHLPRK CCCCCCCCCCC >Mature Secondary Structure MFSSAAGDEDERVSDHDILVASTIAIGTYKNNNYSVAILLSYNHLMNGGITLTPNLGIRY CCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEECCCCCEEE GCFERRHLPRK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA