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The map label for this gene is sdhD [H]

Identifier: 157825306

GI number: 157825306

Start: 174409

End: 174786

Strand: Direct

Name: sdhD [H]

Synonym: A1C_00940

Alternate gene names: 157825306

Gene position: 174409-174786 (Clockwise)

Preceding gene: 157825305

Following gene: 157825307

Centisome position: 14.17

GC content: 29.63

Gene sequence:

>378_bases
ATGGTATATGATTTTAAAGTAGAAATTGTAAAAGCCAAAAATAGCGGTTCTGCTAAAAGTGGTTCTCATCGTTGGTTGTC
GCAAAGAATAACGGGGATTATATTAGCTTTATGTTCTATATGGTTAATATATTTTATGCTAACTAACAAAAATAATGACA
TAAATATTATTATGTGGGAGCTTAAAAAGCCTTTTAACGTAGTAGCATTGTTAATTACGGTGGCTATTTCGTTGTATCAT
TCAATGCTTGGTATGCGTGTAGTGATTGAGGATTATATAAGTTGTCACAAATTACATAATATCTTGATTATAATAGTGCA
ATTATTTTGCATTGTGACTATTACTACTTTTGTAGTAGCGATGTTTTATATTGGATGA

Upstream 100 bases:

>100_bases
ATATAGATATGATTGTAATTGTAAGGTTTTACAAAGTTTTTGGTGTCATTCCAGCGAAAGCGGGAATGACACCAATACAA
AATATGTTTAGAGAAAATTA

Downstream 100 bases:

>100_bases
ATTATAAGGTAATTTATTATGGATATAATAGTAATCGCAAAAAAGTTAATTCAGGAATGTATAGTAATGCGAGTGCGGTA
GTAGCAGAAGCTTTAGGATT

Product: succinate dehydrogenase hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWELKKPFNVVALLITVAISLYH
SMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVAMFYIG

Sequences:

>Translated_125_residues
MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWELKKPFNVVALLITVAISLYH
SMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVAMFYIG
>Mature_125_residues
MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWELKKPFNVVALLITVAISLYH
SMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVAMFYIG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14326; Mature: 14326

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWE
CEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LKKPFNVVALLITVAISLYHSMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFYIG
HHHCC
>Mature Secondary Structure
MVYDFKVEIVKAKNSGSAKSGSHRWLSQRITGIILALCSIWLIYFMLTNKNNDINIIMWE
CEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LKKPFNVVALLITVAISLYHSMLGMRVVIEDYISCHKLHNILIIIVQLFCIVTITTFVVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFYIG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]