| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825288
Identifier: 157825288
GI number: 157825288
Start: 159658
End: 159894
Strand: Reverse
Name: 157825288
Synonym: A1C_00850
Alternate gene names: NA
Gene position: 159894-159658 (Counterclockwise)
Preceding gene: 157825296
Following gene: 157825263
Centisome position: 12.99
GC content: 31.22
Gene sequence:
>237_bases ATGTCAGAAGTAGTAGTAAAAGAACAATTAGAGCAATATATAAGCAAAATAGAAAGATTGGAACAAGAAAAAGCTGATTT GTCTCAAGAAGTAAAAGATATTTTCCAAGATGCTTCTGCGCATGGTTTTGATGTTAAAGCTATGAAATCTATATTGAAAC TAAAGAAATTGGATAAAGATAAACTTGCCGAGCAGGATGCTATGCTTGAACTTTATAGAGATACTTTAGGGATTTAG
Upstream 100 bases:
>100_bases TGAGGATGCGAATCCTTAATAACATGCAAGAACAATTCTTGAAAGATAAGTAGCATATCTGTATTATATAGTAAATTCAA AAAGGTTAAACGATTTTTTT
Downstream 100 bases:
>100_bases TAGGTTTGCTTGCATATCGTCATTGGAATGGAAATGTAGAATTATCCTCAGCCGCCTATGTCATTCCAGCAAAGGCGGGA ATTCAGAAAAAATACATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI
Sequences:
>Translated_78_residues MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI >Mature_77_residues SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 9014; Mature: 8882
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH KLAEQDAMLELYRDTLGI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH KLAEQDAMLELYRDTLGI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA