| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is engB
Identifier: 157825273
GI number: 157825273
Start: 135384
End: 136022
Strand: Direct
Name: engB
Synonym: A1C_00760
Alternate gene names: 157825273
Gene position: 135384-136022 (Clockwise)
Preceding gene: 157825272
Following gene: 157825274
Centisome position: 11.0
GC content: 31.14
Gene sequence:
>639_bases ATGATTAATAATGAAAAAGCGGTAAATAATAAAAGATCAACTGATGGCGGTAAGCTTTTTCGTAGTCAAGTTAAATTTGT AGCCGGTGCTATGAATATAAATCAAATCCCCAATTTTTCATTACCGGAAATTGCTTTTGTCGGTAAGTCAAATGTCGGAA AATCAAGCCTAATAAATACGATATGTAATAATAAAAATCTTGCTAAAGTTTCTAATACTCCGGGACGTACCAGGCAAATC AATTTTTTTAACCTTGCAGATAAACTTATTATAGTTGACCTTCCCGGTTATGGTTTTGCTCATGTTCCTATATCAGTCAA AGAACAGTGGGAAGTGTTAATTAGTTATTATTTACGAAATAGTCATAATTTAAGGTTAGTTAACTTATTGATTGACTCAA GAAGGGGTATAAAAGAAAACGATCAGAAAGTAGCTGAGTTATTACTTGCAAATAAAAGAGAATTTCAAATTATTTTCACA AAATCCGATAAAGTTATTGATTGTAAAAACCTTAACAATGAAGTACAGAATTTTCTTGCAACTTTAAACTACTCATGTAA TGTTATGTACGTAAGTAGTAGGAGTAAAGAAGGTGCAAGAGCACTTAAAGCTAGTTTGGCAAAATGCATCAAAGCTTAA
Upstream 100 bases:
>100_bases TGCTTTCTTGCAATGACGAAAAAATCTGTCCATATAGTAACGTCTAATTTTTCTTACAATGATTATACAATACCTGCAAA TTTATCAAATCTAAAAAACT
Downstream 100 bases:
>100_bases TAGGTAAAGAGGTAGATAGTATTTCTTCATTAAATAACATTGCTATAATTGAGAATATAATAAAGTGTAGTAGTGAGTTG AAGCATCAAGTAATAGTTCT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MINNEKAVNNKRSTDGGKLFRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQI NFFNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDQKVAELLLANKREFQIIFT KSDKVIDCKNLNNEVQNFLATLNYSCNVMYVSSRSKEGARALKASLAKCIKA
Sequences:
>Translated_212_residues MINNEKAVNNKRSTDGGKLFRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQI NFFNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDQKVAELLLANKREFQIIFT KSDKVIDCKNLNNEVQNFLATLNYSCNVMYVSSRSKEGARALKASLAKCIKA >Mature_212_residues MINNEKAVNNKRSTDGGKLFRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQI NFFNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRGIKENDQKVAELLLANKREFQIIFT KSDKVIDCKNLNNEVQNFLATLNYSCNVMYVSSRSKEGARALKASLAKCIKA
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=193, Percent_Identity=31.0880829015544, Blast_Score=100, Evalue=1e-21, Organism=Escherichia coli, GI145693205, Length=186, Percent_Identity=37.6344086021505, Blast_Score=129, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320543, Length=142, Percent_Identity=35.2112676056338, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_RICAH (A8GM60)
Other databases:
- EMBL: CP000847 - RefSeq: YP_001492993.1 - ProteinModelPortal: A8GM60 - SMR: A8GM60 - STRING: A8GM60 - GeneID: 5645784 - GenomeReviews: CP000847_GR - KEGG: rak:A1C_00760 - NMPDR: fig|293614.3.peg.139 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FSTTWED - ProtClustDB: PRK00454 - BioCyc: RAKA293614:A1C_00760-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23781; Mature: 23781
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNEKAVNNKRSTDGGKLFRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHH ICNNKNLAKVSNTPGRTRQINFFNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRN HHCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCC SHNLRLVNLLIDSRRGIKENDQKVAELLLANKREFQIIFTKSDKVIDCKNLNNEVQNFLA CCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHH TLNYSCNVMYVSSRSKEGARALKASLAKCIKA HHCCCEEEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MINNEKAVNNKRSTDGGKLFRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHH ICNNKNLAKVSNTPGRTRQINFFNLADKLIIVDLPGYGFAHVPISVKEQWEVLISYYLRN HHCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCC SHNLRLVNLLIDSRRGIKENDQKVAELLLANKREFQIIFTKSDKVIDCKNLNNEVQNFLA CCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHH TLNYSCNVMYVSSRSKEGARALKASLAKCIKA HHCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA