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The map label for this gene is dcd [H]

Identifier: 157825229

GI number: 157825229

Start: 90754

End: 91320

Strand: Direct

Name: dcd [H]

Synonym: A1C_00540

Alternate gene names: 157825229

Gene position: 90754-91320 (Clockwise)

Preceding gene: 157825225

Following gene: 157825230

Centisome position: 7.37

GC content: 33.33

Gene sequence:

>567_bases
ATGGCTATAATGTCAGATAAGTGGATAAAGGAAGCTGTTATAAATCAAAGTATGATAAGTCCCTTTGCGGAAAAGCAGGT
AAGAGTTCATAATAAAGAAAAAATTATTTCTTACGGTTTATCTTCTTACGGTTATGATGCTAGAGTATCTAATGAATTCA
AAATATTCACCAATATAAATTCTACTACGGTTGATCCAAAAAATTTCAGTGAATATAATTTGGTTGATAGAGAAGTAGAT
GTGTGTATTATTCCACCTAATAGTTTTGCTCTTGGCCGAACTATAGAATATTTTAAAATACCGCGTGATGTATTAGTTAT
TTGTGTCGGCAAGTCCACTTATGCAAGATGCGGTATAATAGTAAATGTGACTCCGTTAGAACCGGAGTGGGAAGGACATG
TAACTTTAGAGTTTTCTAATACTACTCCATTACCTGCCAAAATATATGCAAATGAAGGAGCTTGTCAGTTTTTATTTTTA
AAGAGTGATCAAATTTGTGATACTTCATATGCCGATCGTCAAGGAAAATATATGAAGCAGGTAGGCGTAACTTTACCGTT
AACCTAA

Upstream 100 bases:

>100_bases
TCTCAAGTAGTCCTAGACTTATAGTGTAAAAGAAAAATTTTGTATTATAAATGATTATGAGTTATAATCGTTGGTTTATT
AATTAAATTAAGTTTTGATT

Downstream 100 bases:

>100_bases
CTTTTTTATGTAAGAACCTGTTCACGATCTTGATTTTAAAGCTAATTAAAATCTTTTTAGCCGCAAATTATAAGATTTTT
TTGAAATAAGAATACTGTTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAIMSDKWIKEAVINQSMISPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNINSTTVDPKNFSEYNLVDREVD
VCIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFL
KSDQICDTSYADRQGKYMKQVGVTLPLT

Sequences:

>Translated_188_residues
MAIMSDKWIKEAVINQSMISPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNINSTTVDPKNFSEYNLVDREVD
VCIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFL
KSDQICDTSYADRQGKYMKQVGVTLPLT
>Mature_187_residues
AIMSDKWIKEAVINQSMISPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNINSTTVDPKNFSEYNLVDREVDV
CIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFLK
SDQICDTSYADRQGKYMKQVGVTLPLT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21250; Mature: 21118

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIMSDKWIKEAVINQSMISPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNIN
CCCCCHHHHHHHHHHHHHHCHHHHHHEEECCHHHHEECCCCCCCCCEEECCCEEEEEECC
STTVDPKNFSEYNLVDREVDVCIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGII
CCEECCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEE
VNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFLKSDQICDTSYADRQGKYMKQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHH
VGVTLPLT
CCCEECCC
>Mature Secondary Structure 
AIMSDKWIKEAVINQSMISPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNIN
CCCCHHHHHHHHHHHHHHCHHHHHHEEECCHHHHEECCCCCCCCCEEECCCEEEEEECC
STTVDPKNFSEYNLVDREVDVCIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGII
CCEECCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEE
VNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFLKSDQICDTSYADRQGKYMKQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHH
VGVTLPLT
CCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA