| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825228
Identifier: 157825228
GI number: 157825228
Start: 89150
End: 90469
Strand: Reverse
Name: 157825228
Synonym: A1C_00535
Alternate gene names: NA
Gene position: 90469-89150 (Counterclockwise)
Preceding gene: 157825233
Following gene: 157825227
Centisome position: 7.35
GC content: 35.0
Gene sequence:
>1320_bases ATGAAAAAATTATTATTAGCTGCAAGTATTATTTGCTTTGCATCGGCTACTCTTGCCGAAGAAAATTCGACACCTGTTAT TTCTAATTCTGATACTGAAATAAAATTAGAAGGATTTTATTTATTTGAAAGCGGTTATATTAAACAGAATCATTTAATTT TATTTGATAAAAATGTAACTGATAACAGGAAAACGTTAGGGTTTTACACGGAAGGAGCGTTTGCGGCAACTGTTTCTAAA ACTATCAATGATGTAATAGTAGGTGCTAAAATAGTGCTTCAGCCTACTACAAAAGTAAAAACCTCTGCAAGTTATAACGG ATCACATATCTTTATTAAAACTAGTTACGGTAAAGTAGAATTAGGTTCTCCTGTCGATGCAAGTTCTAAATTACGTATTA CAGGCTCTCAAGTAACCGCAGGTACCGGAGGATGGTATAGATATGCTCTACTTGATGGGCAATATATGAGGTTTCACGGT TTAAAACCAGATTTCGATACTAGTGCTAGCTTTTATCTTGAATCATACTCGAACTCTTTTAATCAAATCAATGAAAAAAC TGAAAAAGCTAGAAGACTCAATTTTTTCACACCTAAAATGAAAGGCTTCCAGGCTGGTATCTCTTATACTCCCGATACTG CTAATACGGGCGGTAACAAAAATATAAATAATTTAACTCTTGAAGGCTCAGGAAGAAACGGGGTTAGTGTTGCTAGAACC GGAATAAAGACGGTTTCCTTAGGAAATGGCGAGACTATGGCTATAAATCAGAATATTAGAGATGCTTTTTCTGCCGGCTT AACTTATGAACATGAAATTAGCGAAGATGCAGACTTGAAATTATCTGTTACCGGAGAGTATGGTAAACCTGCTCGTCGTC TTGTTCATGCTAAAATGGAAGACACTAAGGTAATAGAAGTATTAAATACCTATAAGCTTTCTAATTTAAAAGCATATAAT CTTGGAGCTGTATTTACTTATGGTAATTTCTCTTGTGGGGCTTCTTACGGTAATTTAGGTAGAAGCTTAACCGCTAAGGA ATATTATAAAGTCGGTCGTGATACCTATTATTACAATGGCGCAGTTGCTTATGGACAAGGACCTATAAAGACAAGTCTAG AATATATTAAAACTTCAAGATATAAAAACACCGTCGATGCTGTGAGCCTCGCTACTGAATATAAGATTATGCCTGGTTTA TTACCATATGCTGAAATTTCTCATTTCCAAGCTAAAGGTAAACCTGTATATTACCCTGAAGCACCTATTAAAACAACACG AGGTACTGTTGGTCTTATAGGTACAAAGCTTAAGTTTTGA
Upstream 100 bases:
>100_bases TATTATCTTTTAGCGTAGTTGATTTATATTTATATCAATACTAAAAATTTATTTTGTATAGTAAATTTGATTATTTAAGT TTATAGGGACTTTATTAAAG
Downstream 100 bases:
>100_bases TTATTAATTCCCATTACTACTATAATCAATGCTTAGAGCAATCTTATGTGTAGTATTGGATAATTTTTAAAAAGCTCTCC TATATCATCCATGAGAAAGC
Product: putative surface antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKKLLLAASIICFASATLAEENSTPVISNSDTEIKLEGFYLFESGYIKQNHLILFDKNVTDNRKTLGFYTEGAFAATVSK TINDVIVGAKIVLQPTTKVKTSASYNGSHIFIKTSYGKVELGSPVDASSKLRITGSQVTAGTGGWYRYALLDGQYMRFHG LKPDFDTSASFYLESYSNSFNQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGGNKNINNLTLEGSGRNGVSVART GIKTVSLGNGETMAINQNIRDAFSAGLTYEHEISEDADLKLSVTGEYGKPARRLVHAKMEDTKVIEVLNTYKLSNLKAYN LGAVFTYGNFSCGASYGNLGRSLTAKEYYKVGRDTYYYNGAVAYGQGPIKTSLEYIKTSRYKNTVDAVSLATEYKIMPGL LPYAEISHFQAKGKPVYYPEAPIKTTRGTVGLIGTKLKF
Sequences:
>Translated_439_residues MKKLLLAASIICFASATLAEENSTPVISNSDTEIKLEGFYLFESGYIKQNHLILFDKNVTDNRKTLGFYTEGAFAATVSK TINDVIVGAKIVLQPTTKVKTSASYNGSHIFIKTSYGKVELGSPVDASSKLRITGSQVTAGTGGWYRYALLDGQYMRFHG LKPDFDTSASFYLESYSNSFNQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGGNKNINNLTLEGSGRNGVSVART GIKTVSLGNGETMAINQNIRDAFSAGLTYEHEISEDADLKLSVTGEYGKPARRLVHAKMEDTKVIEVLNTYKLSNLKAYN LGAVFTYGNFSCGASYGNLGRSLTAKEYYKVGRDTYYYNGAVAYGQGPIKTSLEYIKTSRYKNTVDAVSLATEYKIMPGL LPYAEISHFQAKGKPVYYPEAPIKTTRGTVGLIGTKLKF >Mature_439_residues MKKLLLAASIICFASATLAEENSTPVISNSDTEIKLEGFYLFESGYIKQNHLILFDKNVTDNRKTLGFYTEGAFAATVSK TINDVIVGAKIVLQPTTKVKTSASYNGSHIFIKTSYGKVELGSPVDASSKLRITGSQVTAGTGGWYRYALLDGQYMRFHG LKPDFDTSASFYLESYSNSFNQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGGNKNINNLTLEGSGRNGVSVART GIKTVSLGNGETMAINQNIRDAFSAGLTYEHEISEDADLKLSVTGEYGKPARRLVHAKMEDTKVIEVLNTYKLSNLKAYN LGAVFTYGNFSCGASYGNLGRSLTAKEYYKVGRDTYYYNGAVAYGQGPIKTSLEYIKTSRYKNTVDAVSLATEYKIMPGL LPYAEISHFQAKGKPVYYPEAPIKTTRGTVGLIGTKLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48141; Mature: 48141
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLAASIICFASATLAEENSTPVISNSDTEIKLEGFYLFESGYIKQNHLILFDKNVT CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEEEEECCEEECCEEEEEECCCC DNRKTLGFYTEGAFAATVSKTINDVIVGAKIVLQPTTKVKTSASYNGSHIFIKTSYGKVE CCCEEEEEEECCCEEHHHHHHHHHHEECEEEEEECCCCEEECCCCCCCEEEEEECCCEEE LGSPVDASSKLRITGSQVTAGTGGWYRYALLDGQYMRFHGLKPDFDTSASFYLESYSNSF ECCCCCCCCEEEEECCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCHHEEEEHHHHHH NQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGGNKNINNLTLEGSGRNGVSVART HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEC GIKTVSLGNGETMAINQNIRDAFSAGLTYEHEISEDADLKLSVTGEYGKPARRLVHAKME CEEEEEECCCCEEEECCCHHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHCCC DTKVIEVLNTYKLSNLKAYNLGAVFTYGNFSCGASYGNLGRSLTAKEYYKVGRDTYYYNG CHHHHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC AVAYGQGPIKTSLEYIKTSRYKNTVDAVSLATEYKIMPGLLPYAEISHFQAKGKPVYYPE EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEECCC APIKTTRGTVGLIGTKLKF CCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKKLLLAASIICFASATLAEENSTPVISNSDTEIKLEGFYLFESGYIKQNHLILFDKNVT CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEEEEECCEEECCEEEEEECCCC DNRKTLGFYTEGAFAATVSKTINDVIVGAKIVLQPTTKVKTSASYNGSHIFIKTSYGKVE CCCEEEEEEECCCEEHHHHHHHHHHEECEEEEEECCCCEEECCCCCCCEEEEEECCCEEE LGSPVDASSKLRITGSQVTAGTGGWYRYALLDGQYMRFHGLKPDFDTSASFYLESYSNSF ECCCCCCCCEEEEECCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCHHEEEEHHHHHH NQINEKTEKARRLNFFTPKMKGFQAGISYTPDTANTGGNKNINNLTLEGSGRNGVSVART HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEC GIKTVSLGNGETMAINQNIRDAFSAGLTYEHEISEDADLKLSVTGEYGKPARRLVHAKME CEEEEEECCCCEEEECCCHHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHCCC DTKVIEVLNTYKLSNLKAYNLGAVFTYGNFSCGASYGNLGRSLTAKEYYKVGRDTYYYNG CHHHHHHHHHHCCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC AVAYGQGPIKTSLEYIKTSRYKNTVDAVSLATEYKIMPGLLPYAEISHFQAKGKPVYYPE EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEECCC APIKTTRGTVGLIGTKLKF CCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]