| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825199
Identifier: 157825199
GI number: 157825199
Start: 59948
End: 61072
Strand: Reverse
Name: 157825199
Synonym: A1C_00390
Alternate gene names: NA
Gene position: 61072-59948 (Counterclockwise)
Preceding gene: 157825200
Following gene: 157825188
Centisome position: 4.96
GC content: 31.91
Gene sequence:
>1125_bases ATGTCAATCGAATCCAAAATAAGACAATTAATTAAACAAAACGGTTATATTACTTGCGATGTCCTCATGCAGGAGGTATT AAACTTAAATCCTACTTCCTATTATAAGAAAGTAAAATCATTGGCTGGCGAAGGGGACTTTGTTACAGCTCCTGAAATTT CACAGCTATTCGGTGAAATTATCGGCTTATGGTGTATCAAAGAGTGGCAAAGAATCGGTTGCCCAAAAAGTCTTAGTTTA GTAGAGCTTGGTCCTGGTCGTGGTCTATTAATGCGTGATTTACTACGCACTGCAAAATTAGTACCGGAATTTTACAAAGC TTTATCAATTGAACTAATAGAAATTAATCAAAATTTTATTGCTCATCAGAAGGCTAATTTACAAGATATTAATTTACCGA TTAGCCATCGATCATTTGTAGAAGATATACCAAAAAAACCTACTATAATAATAGCTAATGAATTCTTTGATGCTATGACG ATAAAACAATATATTAAAGTCAAGGAATTATGGTATGAAAGAATATTTGTAGTGCAACCGGTAGACGGCAGAATTAAATA CGATAAAATAAGCATTAATAAACCATTACAAGAATATCTACTAAGAACTCATATTGAAGCAAAAGACGGAGCAGTACTTG AAGAATCTTATAAATCGATAGAAATTATAAAATTTATAGCACAGCATCTAAAAACACTAAGCGGTAGTTGCTTAATAATA GATTATGGCTATGATATAGCTCCGAATGATAGAACTGGATATCAATATAATCCAACATTACAAGCGGTCAAAAACCATCA ATATTGCCCCATCCTTGAAAATCTTGGAGAAGCTGATTTATCGGCACATGTGGATTTTTATACATTAAAAACAGTAGCTA AAAATAATAAAATAAACGTAATAGATACAATAGCTCAACGAGATTTTTTAATAGAAAACGGTATCTTATTGCGCAAGCAA ACATTGCAAAACAAGCTGAACAATAGACATCTTTCCAAATTACCTCTAGAAGTAGAGTTTGAAAAAGTGTCTAAGCAAGC AGGAATAATAGAAAAACAGGTAGAGAGGCTAATATCCCCAAAACAAATGGGAACATTATTTAAAGTATTACAAATTATGC ATTAA
Upstream 100 bases:
>100_bases TATTTAGAGAACCAGACATACAAATCGGGTTTATTTTAGATAACTTAACTATGGGACAAATTTTATCTGTACCTATGTTA ATTTTAGGAAGTTATTTAAT
Downstream 100 bases:
>100_bases TCTATTTTAGCTCTTTTACAGAACCTAAGTTCTTCGTCTTGGTTATAAATGGACAACTTGGGCCCCCTTATTCACATTTC AGAATAGATTCAAATTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSIESKIRQLIKQNGYITCDVLMQEVLNLNPTSYYKKVKSLAGEGDFVTAPEISQLFGEIIGLWCIKEWQRIGCPKSLSL VELGPGRGLLMRDLLRTAKLVPEFYKALSIELIEINQNFIAHQKANLQDINLPISHRSFVEDIPKKPTIIIANEFFDAMT IKQYIKVKELWYERIFVVQPVDGRIKYDKISINKPLQEYLLRTHIEAKDGAVLEESYKSIEIIKFIAQHLKTLSGSCLII DYGYDIAPNDRTGYQYNPTLQAVKNHQYCPILENLGEADLSAHVDFYTLKTVAKNNKINVIDTIAQRDFLIENGILLRKQ TLQNKLNNRHLSKLPLEVEFEKVSKQAGIIEKQVERLISPKQMGTLFKVLQIMH
Sequences:
>Translated_374_residues MSIESKIRQLIKQNGYITCDVLMQEVLNLNPTSYYKKVKSLAGEGDFVTAPEISQLFGEIIGLWCIKEWQRIGCPKSLSL VELGPGRGLLMRDLLRTAKLVPEFYKALSIELIEINQNFIAHQKANLQDINLPISHRSFVEDIPKKPTIIIANEFFDAMT IKQYIKVKELWYERIFVVQPVDGRIKYDKISINKPLQEYLLRTHIEAKDGAVLEESYKSIEIIKFIAQHLKTLSGSCLII DYGYDIAPNDRTGYQYNPTLQAVKNHQYCPILENLGEADLSAHVDFYTLKTVAKNNKINVIDTIAQRDFLIENGILLRKQ TLQNKLNNRHLSKLPLEVEFEKVSKQAGIIEKQVERLISPKQMGTLFKVLQIMH >Mature_373_residues SIESKIRQLIKQNGYITCDVLMQEVLNLNPTSYYKKVKSLAGEGDFVTAPEISQLFGEIIGLWCIKEWQRIGCPKSLSLV ELGPGRGLLMRDLLRTAKLVPEFYKALSIELIEINQNFIAHQKANLQDINLPISHRSFVEDIPKKPTIIIANEFFDAMTI KQYIKVKELWYERIFVVQPVDGRIKYDKISINKPLQEYLLRTHIEAKDGAVLEESYKSIEIIKFIAQHLKTLSGSCLIID YGYDIAPNDRTGYQYNPTLQAVKNHQYCPILENLGEADLSAHVDFYTLKTVAKNNKINVIDTIAQRDFLIENGILLRKQT LQNKLNNRHLSKLPLEVEFEKVSKQAGIIEKQVERLISPKQMGTLFKVLQIMH
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=387, Percent_Identity=29.4573643410853, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI193211224, Length=335, Percent_Identity=31.9402985074627, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24645885, Length=400, Percent_Identity=29, Blast_Score=159, Evalue=4e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42960; Mature: 42829
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIESKIRQLIKQNGYITCDVLMQEVLNLNPTSYYKKVKSLAGEGDFVTAPEISQLFGEI CCHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHH IGLWCIKEWQRIGCPKSLSLVELGPGRGLLMRDLLRTAKLVPEFYKALSIELIEINQNFI HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH AHQKANLQDINLPISHRSFVEDIPKKPTIIIANEFFDAMTIKQYIKVKELWYERIFVVQP HHCCCCCEECCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEC VDGRIKYDKISINKPLQEYLLRTHIEAKDGAVLEESYKSIEIIKFIAQHLKTLSGSCLII CCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DYGYDIAPNDRTGYQYNPTLQAVKNHQYCPILENLGEADLSAHVDFYTLKTVAKNNKINV ECCCCCCCCCCCCCEECCHHHHHCCCCCCCHHHHCCCCHHHHCCHHEEHHHHHCCCCEEH IDTIAQRDFLIENGILLRKQTLQNKLNNRHLSKLPLEVEFEKVSKQAGIIEKQVERLISP HHHHHHHHHHHHCCEEEHHHHHHHHHCCCCHHHCCCEEEHHHHHHHCCHHHHHHHHHCCH KQMGTLFKVLQIMH HHHHHHHHHHHHHC >Mature Secondary Structure SIESKIRQLIKQNGYITCDVLMQEVLNLNPTSYYKKVKSLAGEGDFVTAPEISQLFGEI CHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHH IGLWCIKEWQRIGCPKSLSLVELGPGRGLLMRDLLRTAKLVPEFYKALSIELIEINQNFI HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH AHQKANLQDINLPISHRSFVEDIPKKPTIIIANEFFDAMTIKQYIKVKELWYERIFVVQP HHCCCCCEECCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEC VDGRIKYDKISINKPLQEYLLRTHIEAKDGAVLEESYKSIEIIKFIAQHLKTLSGSCLII CCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DYGYDIAPNDRTGYQYNPTLQAVKNHQYCPILENLGEADLSAHVDFYTLKTVAKNNKINV ECCCCCCCCCCCCCEECCHHHHHCCCCCCCHHHHCCCCHHHHCCHHEEHHHHHCCCCEEH IDTIAQRDFLIENGILLRKQTLQNKLNNRHLSKLPLEVEFEKVSKQAGIIEKQVERLISP HHHHHHHHHHHHCCEEEHHHHHHHHHCCCCHHHCCCEEEHHHHHHHCCHHHHHHHHHCCH KQMGTLFKVLQIMH HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA