| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825144
Identifier: 157825144
GI number: 157825144
Start: 16130
End: 17452
Strand: Direct
Name: 157825144
Synonym: A1C_00105
Alternate gene names: NA
Gene position: 16130-17452 (Clockwise)
Preceding gene: 157825143
Following gene: 157825145
Centisome position: 1.31
GC content: 33.79
Gene sequence:
>1323_bases ATGACTAGCATATACCACATTCTTGACCGTGTTCCTGCTATTTATAAGCAGGATATAGAAATAGAGTATGAGAATTTAGC GATGCAGTTAATCAAATCCGGTAAATTACGGATAGATACCGATGATTGCTGCAATTTTGCAAGATTTATCGAACCTGCTC TTAATATAAGCTTGATGGTTAGTAAAGAAGAGCTAACAAGCCCGAATTTAATCCATGAAACTACCAAGCTTTTTCAAAAT GTATATAGAAATGCTGCTTCAGATCAGAAAATAAAATCAATTTTTGACAATTTAAAAAATCAAATACAAAAATTGCAGCC GGTTAAGAAAGAAGTAACCGAAATGTTGGCACGTCTTTTTGTTCAGTCGGCTCATCCGATCGTAATAAGATGGCTTCTTC TTAATAAGACGGAAGTATTTCTCACCTATTCGCATAATATCGGCGATATGATGGATATGGTTAGCTGGCAACGAGTGGGC GGTAATAGCGGTATGCAAAGCACTAACGGCAAGGACGTAGCTATTTTTGTTTCATGCGGTGGTAATCCTTTTGCTGAAAA CAATAAAGAGCATCAGACTTACGGTAATGGCTGGCCTGCCATTGCTAGGCTTCAGATTATCGCAGCTCAAGAACTTGGGC ATTTTGCCGATATAAAAAGAGATGATAAAGGCAGACAAATAACGCGCCATTCGGCTAATTTCTCCTGTACTAAAGCTACC GATAAAGTACGAATTGCTAGAAAAAGTGATATAATAAATTGTCATAATTTGCTGAGTAAGCTCCTTAAAGCAGGTATGAA AAAACAGCTAGATTATGAAACGAAACTTAAATTTTATAATGCAAATAAAGTCGGCGGTTTAAAAGTTTATACTATAAAAT TCATGATTTTTATATATAAATTTCGGCTTTTAAATTATAGTCGTAGGAATAATCTAATATTTGTAAGAAAATTTAAAACC GATAAATATATGGCATTAATGATTGATGCTATGTTTAAAGATATGCAAGCTAATTTGTCACCAAACGCTGAAGTGTATAA AAATAAAAACCCTGAAATTCAAGAAGCTGTAGCCTGTATTGAGGCACTCGCTAGAGTACCGCAACAAGTTGTAAAATGGG GATATTTAACTACCAAAGAAACTATGCATGACCTCTATAAAATATATTATAACGAGGTTATACCTTCTTTAATTACTAGC TATAATGCTGTCACCGGTGAAAATTATAAACGTTATTTTAAAAAACCAAAAAGTAGCTTCTTTTCTAAAATCAATATCTT TAGTAACAAAAAGCTAATACTAAAACCGGTTAGGGAATTATGA
Upstream 100 bases:
>100_bases GTGTTTAAATCTGACGCAATAGATGTATTATTTCTAGATATAGATGAAAATGGTGTTATAACGATAGTAGGTGATATTAA ACAATAAATTTATTTAAAAA
Downstream 100 bases:
>100_bases TTATACAGATGTGAAACGCAGAATAGTAGACGAAGATACACTTCAAAAAGAGCAAGGAATTCACAATGAGAGGAACGTAG CGTATACTTAAATACATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTSIYHILDRVPAIYKQDIEIEYENLAMQLIKSGKLRIDTDDCCNFARFIEPALNISLMVSKEELTSPNLIHETTKLFQN VYRNAASDQKIKSIFDNLKNQIQKLQPVKKEVTEMLARLFVQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDMVSWQRVG GNSGMQSTNGKDVAIFVSCGGNPFAENNKEHQTYGNGWPAIARLQIIAAQELGHFADIKRDDKGRQITRHSANFSCTKAT DKVRIARKSDIINCHNLLSKLLKAGMKKQLDYETKLKFYNANKVGGLKVYTIKFMIFIYKFRLLNYSRRNNLIFVRKFKT DKYMALMIDAMFKDMQANLSPNAEVYKNKNPEIQEAVACIEALARVPQQVVKWGYLTTKETMHDLYKIYYNEVIPSLITS YNAVTGENYKRYFKKPKSSFFSKINIFSNKKLILKPVREL
Sequences:
>Translated_440_residues MTSIYHILDRVPAIYKQDIEIEYENLAMQLIKSGKLRIDTDDCCNFARFIEPALNISLMVSKEELTSPNLIHETTKLFQN VYRNAASDQKIKSIFDNLKNQIQKLQPVKKEVTEMLARLFVQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDMVSWQRVG GNSGMQSTNGKDVAIFVSCGGNPFAENNKEHQTYGNGWPAIARLQIIAAQELGHFADIKRDDKGRQITRHSANFSCTKAT DKVRIARKSDIINCHNLLSKLLKAGMKKQLDYETKLKFYNANKVGGLKVYTIKFMIFIYKFRLLNYSRRNNLIFVRKFKT DKYMALMIDAMFKDMQANLSPNAEVYKNKNPEIQEAVACIEALARVPQQVVKWGYLTTKETMHDLYKIYYNEVIPSLITS YNAVTGENYKRYFKKPKSSFFSKINIFSNKKLILKPVREL >Mature_439_residues TSIYHILDRVPAIYKQDIEIEYENLAMQLIKSGKLRIDTDDCCNFARFIEPALNISLMVSKEELTSPNLIHETTKLFQNV YRNAASDQKIKSIFDNLKNQIQKLQPVKKEVTEMLARLFVQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDMVSWQRVGG NSGMQSTNGKDVAIFVSCGGNPFAENNKEHQTYGNGWPAIARLQIIAAQELGHFADIKRDDKGRQITRHSANFSCTKATD KVRIARKSDIINCHNLLSKLLKAGMKKQLDYETKLKFYNANKVGGLKVYTIKFMIFIYKFRLLNYSRRNNLIFVRKFKTD KYMALMIDAMFKDMQANLSPNAEVYKNKNPEIQEAVACIEALARVPQQVVKWGYLTTKETMHDLYKIYYNEVIPSLITSY NAVTGENYKRYFKKPKSSFFSKINIFSNKKLILKPVREL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020183 - ProDom: PD216750 [H]
Pfam domain/function: PF10871 DUF2748 [H]
EC number: NA
Molecular weight: Translated: 50874; Mature: 50743
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIYHILDRVPAIYKQDIEIEYENLAMQLIKSGKLRIDTDDCCNFARFIEPALNISLMV CCHHHHHHHHCHHHHHCCCCEEHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCEEEEE SKEELTSPNLIHETTKLFQNVYRNAASDQKIKSIFDNLKNQIQKLQPVKKEVTEMLARLF EHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDMVSWQRVGGNSGMQSTNGKDVAIFVSCG HHCCCHHEEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC GNPFAENNKEHQTYGNGWPAIARLQIIAAQELGHFADIKRDDKGRQITRHSANFSCTKAT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEHHCCCCCEEECCC DKVRIARKSDIINCHNLLSKLLKAGMKKQLDYETKLKFYNANKVGGLKVYTIKFMIFIYK CCEEEHHHHCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCEEHHHHHHHHHHHH FRLLNYSRRNNLIFVRKFKTDKYMALMIDAMFKDMQANLSPNAEVYKNKNPEIQEAVACI HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHH EALARVPQQVVKWGYLTTKETMHDLYKIYYNEVIPSLITSYNAVTGENYKRYFKKPKSSF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHH FSKINIFSNKKLILKPVREL HHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure TSIYHILDRVPAIYKQDIEIEYENLAMQLIKSGKLRIDTDDCCNFARFIEPALNISLMV CHHHHHHHHCHHHHHCCCCEEHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCEEEEE SKEELTSPNLIHETTKLFQNVYRNAASDQKIKSIFDNLKNQIQKLQPVKKEVTEMLARLF EHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSAHPIVIRWLLLNKTEVFLTYSHNIGDMMDMVSWQRVGGNSGMQSTNGKDVAIFVSCG HHCCCHHEEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC GNPFAENNKEHQTYGNGWPAIARLQIIAAQELGHFADIKRDDKGRQITRHSANFSCTKAT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEHHCCCCCEEECCC DKVRIARKSDIINCHNLLSKLLKAGMKKQLDYETKLKFYNANKVGGLKVYTIKFMIFIYK CCEEEHHHHCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCEEHHHHHHHHHHHH FRLLNYSRRNNLIFVRKFKTDKYMALMIDAMFKDMQANLSPNAEVYKNKNPEIQEAVACI HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHH EALARVPQQVVKWGYLTTKETMHDLYKIYYNEVIPSLITSYNAVTGENYKRYFKKPKSSF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHH FSKINIFSNKKLILKPVREL HHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]