| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is gmk [H]
Identifier: 157373098
GI number: 157373098
Start: 5390448
End: 5391071
Strand: Direct
Name: gmk [H]
Synonym: Spro_4867
Alternate gene names: 157373098
Gene position: 5390448-5391071 (Clockwise)
Preceding gene: 157373097
Following gene: 157373099
Centisome position: 98.93
GC content: 54.01
Gene sequence:
>624_bases ATGGCTCAAGGCACGCTTTATATTGTCTCTGCCCCCAGTGGCGCAGGGAAATCAAGTCTGATTCAGGCTTTGTTAAAGAC GCAACCGCTGTACGACACGCAGGTTTCGGTTTCGCACACCACGCGCGACAGCCGCCCGGGTGAACAGCACGGCGATCATT ATTTCTTCGTCTCAAAAGATGAATTCTGCCAAATGATTGAGCAGGATGCGTTTCTTGAGCACGCGGAAGTGTTCGGCAAC TATTACGGGACCTCACGTGCCGCTATTGAGCAAGTGTTGTCGACCGGCGTAGACGTTTTCCTGGATATCGACTGGCAGGG CGCACAGCAAATTCGCGCCAAAATGCCACAGGCGCGCAGCATCTTTATTTTGCCGCCGTCGAAGGACGAACTTGGCCGTC GCCTGCGTGGCCGCGGGCAAGACTCGGATGAGGTGATCGCCAAACGCATGGCTCAGGCCGTGGCCGAAATGGCACACTAC GCGGAGTATGATTATTTAATCGTGAACGATGATTTCGATCTGGCCCTGTCCGATCTGAAAACCATTATTCGCGCCGAACG CCTGCGTTTAGGCCGCCAATTACTGCGGCATGACGCTTTAATCAGCAAACTATTGGCAGACTGA
Upstream 100 bases:
>100_bases CGAGCTAACGCTGCATCCGGCTCGTTAGCCGTGTATACTGTGCGGAGAAAATACACATCCGCTGTTATTGGCATATCAAC CGCTATCAACGAACATCATC
Downstream 100 bases:
>100_bases AGACAGTTTCAGTATTATGCCCAGTCTTTTCGTCACCTGTGGAGTAGCACAAATATGGCACGCGTAACTGTTCAAGACGC TGTAGAGAAAATTGGTAACC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRDSRPGEQHGDHYFFVSKDEFCQMIEQDAFLEHAEVFGN YYGTSRAAIEQVLSTGVDVFLDIDWQGAQQIRAKMPQARSIFILPPSKDELGRRLRGRGQDSDEVIAKRMAQAVAEMAHY AEYDYLIVNDDFDLALSDLKTIIRAERLRLGRQLLRHDALISKLLAD
Sequences:
>Translated_207_residues MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRDSRPGEQHGDHYFFVSKDEFCQMIEQDAFLEHAEVFGN YYGTSRAAIEQVLSTGVDVFLDIDWQGAQQIRAKMPQARSIFILPPSKDELGRRLRGRGQDSDEVIAKRMAQAVAEMAHY AEYDYLIVNDDFDLALSDLKTIIRAERLRLGRQLLRHDALISKLLAD >Mature_206_residues AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRDSRPGEQHGDHYFFVSKDEFCQMIEQDAFLEHAEVFGNY YGTSRAAIEQVLSTGVDVFLDIDWQGAQQIRAKMPQARSIFILPPSKDELGRRLRGRGQDSDEVIAKRMAQAVAEMAHYA EYDYLIVNDDFDLALSDLKTIIRAERLRLGRQLLRHDALISKLLAD
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=183, Percent_Identity=39.8907103825137, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI4504221, Length=183, Percent_Identity=39.8907103825137, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI226874831, Length=183, Percent_Identity=39.8907103825137, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI38570142, Length=181, Percent_Identity=32.5966850828729, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI111154074, Length=173, Percent_Identity=32.3699421965318, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI14780902, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI21361598, Length=202, Percent_Identity=30.1980198019802, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=29.0502793296089, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=29.0502793296089, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=29.0502793296089, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=29.0502793296089, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI21536464, Length=179, Percent_Identity=29.608938547486, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=207, Percent_Identity=88.4057971014493, Blast_Score=376, Evalue=1e-106, Organism=Caenorhabditis elegans, GI193203132, Length=181, Percent_Identity=37.0165745856354, Blast_Score=130, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17508835, Length=181, Percent_Identity=37.0165745856354, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6320662, Length=186, Percent_Identity=46.7741935483871, Blast_Score=155, Evalue=5e-39, Organism=Drosophila melanogaster, GI21356141, Length=182, Percent_Identity=38.4615384615385, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI116007136, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45554481, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI85724806, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45554489, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640542, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI161077626, Length=174, Percent_Identity=29.3103448275862, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330162, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330166, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330164, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23263; Mature: 23131
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRDSRPGEQHGDHYFFVSKD CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHH EFCQMIEQDAFLEHAEVFGNYYGTSRAAIEQVLSTGVDVFLDIDWQGAQQIRAKMPQARS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCE IFILPPSKDELGRRLRGRGQDSDEVIAKRMAQAVAEMAHYAEYDYLIVNDDFDLALSDLK EEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH TIIRAERLRLGRQLLRHDALISKLLAD HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRDSRPGEQHGDHYFFVSKD CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECHH EFCQMIEQDAFLEHAEVFGNYYGTSRAAIEQVLSTGVDVFLDIDWQGAQQIRAKMPQARS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCE IFILPPSKDELGRRLRGRGQDSDEVIAKRMAQAVAEMAHYAEYDYLIVNDDFDLALSDLK EEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH TIIRAERLRLGRQLLRHDALISKLLAD HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA