| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is coaBC [H]
Identifier: 157373075
GI number: 157373075
Start: 5361892
End: 5363109
Strand: Direct
Name: coaBC [H]
Synonym: Spro_4843
Alternate gene names: 157373075
Gene position: 5361892-5363109 (Clockwise)
Preceding gene: 157373070
Following gene: 157373076
Centisome position: 98.4
GC content: 57.55
Gene sequence:
>1218_bases ATGATGACGGGACTTTCCGGCAAACATATTGTGCTTGGCATCAGTGGCGGCATCGCCGCATACAAATGCCCAGAACTGGT ACGCCGCCTGCGTGACAGAGGCGCCGAAGTGCGTGTGATAATGACCAGCGCGGCGAAAGCCTTTATCACGCCGCTGACGC TGCAGGCCGTTTCCGGCCATCCGGTCTCAGACGATCTGCTGGATCCCGCCGCCGAAGCGGCCATGGGCCATATCGAGCTC GGTAAATGGGCAGATCTGGTGATCCTGGCTCCGGCCACCGCCGATCTGCTGGCGCGCGTCGCCGCCGGTATGGCCAACGA TCTACTGACCACGGTTTGCCTGGCCACCGCGGCACCCATTGCCGCTGCCCCCGCCATGAACCAGCAGATGTATCGTGCCG TCGCCACCCAAGCCAACCTGCAAACTCTGCAGGCGCGCGGCATGCTGCTGTGGGGGCCAGACAGCGGCAGCCAGGCCTGC GGTGACGTCGGCCCAGGTCGCATGCTCGATCCGCTGGAAATTGTCGAACTGGCGAACAGCCATTTCTCTGCACCACAAGA TCTGCAACATTTAAAGATTATGCTCACCGCCGGCCCGACGCGCGAAGCCTTGGATCCGGTACGTTTCATCAGCAATCACA GCTCCGGCAAGATGGGTTTTGCCATCGCCCGCGCCGCCGCTGCCAGGGGTGCACAGGTCACGTTGATAGCCGGGCCGGTC AATCTGCCAACCCCTCCCTGGGTCACCCGGGTTGACGTCGTCAGCGCGTTGGAAATGGAGCAGGCGGTACAGCAGCGCGC CGCAGCGCAAGATATTTTTATTTCCTGCGCCGCAGTAGCCGATTACCGTGCGGAACAGATTTCCGATGAAAAAATAAAAA AACAGGGTGATGAAATCATCCTCAAAATGGTAAAAAACCCCGACATCGTTGCCGGCGTTGCCGCAATGACGAAAAAGCGC CCATTTGTCGTGGGGTTTGCCGCCGAAACCCAGAATGTGGAAGAATACGCGCGACAAAAACTGGCGCGTAAGAAACTGGA TTTAATTTGCGCTAATGATGTATCGCTTGCAGAGCATGGGTTTAACAGTGACACCAATGCCTTGCACCTTTTTTGGCAGG ATGGAGAAAAGCGCCTGGCGCTGAGCGACAAGGCACTCCTTGGCCAACGTTTAATAGACGAGATAGTCAGCCGTTATGAT GAAAAAAATCGACGTTAA
Upstream 100 bases:
>100_bases GCGCAAAGCACAATGTAACGCACTGCAGACACAGCGGAATCGCTCACCTGTCTGGCGGTTATGCTAAAATGGCACATCTT TCGGATTCAATCGGACAATC
Downstream 100 bases:
>100_bases AATCCTGGACCCGCGTATTGGCAAGGATTTCCCATTACCGACCTACGCCACCCCTGGCTCTGCAGGCCTGGATCTGCGCG CCTGCCTGGACAGCGCCGTT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MMTGLSGKHIVLGISGGIAAYKCPELVRRLRDRGAEVRVIMTSAAKAFITPLTLQAVSGHPVSDDLLDPAAEAAMGHIEL GKWADLVILAPATADLLARVAAGMANDLLTTVCLATAAPIAAAPAMNQQMYRAVATQANLQTLQARGMLLWGPDSGSQAC GDVGPGRMLDPLEIVELANSHFSAPQDLQHLKIMLTAGPTREALDPVRFISNHSSGKMGFAIARAAAARGAQVTLIAGPV NLPTPPWVTRVDVVSALEMEQAVQQRAAAQDIFISCAAVADYRAEQISDEKIKKQGDEIILKMVKNPDIVAGVAAMTKKR PFVVGFAAETQNVEEYARQKLARKKLDLICANDVSLAEHGFNSDTNALHLFWQDGEKRLALSDKALLGQRLIDEIVSRYD EKNRR
Sequences:
>Translated_405_residues MMTGLSGKHIVLGISGGIAAYKCPELVRRLRDRGAEVRVIMTSAAKAFITPLTLQAVSGHPVSDDLLDPAAEAAMGHIEL GKWADLVILAPATADLLARVAAGMANDLLTTVCLATAAPIAAAPAMNQQMYRAVATQANLQTLQARGMLLWGPDSGSQAC GDVGPGRMLDPLEIVELANSHFSAPQDLQHLKIMLTAGPTREALDPVRFISNHSSGKMGFAIARAAAARGAQVTLIAGPV NLPTPPWVTRVDVVSALEMEQAVQQRAAAQDIFISCAAVADYRAEQISDEKIKKQGDEIILKMVKNPDIVAGVAAMTKKR PFVVGFAAETQNVEEYARQKLARKKLDLICANDVSLAEHGFNSDTNALHLFWQDGEKRLALSDKALLGQRLIDEIVSRYD EKNRR >Mature_405_residues MMTGLSGKHIVLGISGGIAAYKCPELVRRLRDRGAEVRVIMTSAAKAFITPLTLQAVSGHPVSDDLLDPAAEAAMGHIEL GKWADLVILAPATADLLARVAAGMANDLLTTVCLATAAPIAAAPAMNQQMYRAVATQANLQTLQARGMLLWGPDSGSQAC GDVGPGRMLDPLEIVELANSHFSAPQDLQHLKIMLTAGPTREALDPVRFISNHSSGKMGFAIARAAAARGAQVTLIAGPV NLPTPPWVTRVDVVSALEMEQAVQQRAAAQDIFISCAAVADYRAEQISDEKIKKQGDEIILKMVKNPDIVAGVAAMTKKR PFVVGFAAETQNVEEYARQKLARKKLDLICANDVSLAEHGFNSDTNALHLFWQDGEKRLALSDKALLGQRLIDEIVSRYD EKNRR
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=171, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=8e-17, Organism=Escherichia coli, GI87082301, Length=404, Percent_Identity=76.980198019802, Blast_Score=626, Evalue=0.0, Organism=Caenorhabditis elegans, GI17560194, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6322762, Length=186, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322925, Length=104, Percent_Identity=36.5384615384615, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI24657262, Length=185, Percent_Identity=30.2702702702703, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43439; Mature: 43439
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTGLSGKHIVLGISGGIAAYKCPELVRRLRDRGAEVRVIMTSAAKAFITPLTLQAVSGH CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHEEEECCCC PVSDDLLDPAAEAAMGHIELGKWADLVILAPATADLLARVAAGMANDLLTTVCLATAAPI CCCHHHHCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAAPAMNQQMYRAVATQANLQTLQARGMLLWGPDSGSQACGDVGPGRMLDPLEIVELANS HHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH HFSAPQDLQHLKIMLTAGPTREALDPVRFISNHSSGKMGFAIARAAAARGAQVTLIAGPV CCCCCHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCC NLPTPPWVTRVDVVSALEMEQAVQQRAAAQDIFISCAAVADYRAEQISDEKIKKQGDEII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LKMVKNPDIVAGVAAMTKKRPFVVGFAAETQNVEEYARQKLARKKLDLICANDVSLAEHG HHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEECCCCHHHHCC FNSDTNALHLFWQDGEKRLALSDKALLGQRLIDEIVSRYDEKNRR CCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMTGLSGKHIVLGISGGIAAYKCPELVRRLRDRGAEVRVIMTSAAKAFITPLTLQAVSGH CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHEEEECCCC PVSDDLLDPAAEAAMGHIELGKWADLVILAPATADLLARVAAGMANDLLTTVCLATAAPI CCCHHHHCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAAPAMNQQMYRAVATQANLQTLQARGMLLWGPDSGSQACGDVGPGRMLDPLEIVELANS HHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH HFSAPQDLQHLKIMLTAGPTREALDPVRFISNHSSGKMGFAIARAAAARGAQVTLIAGPV CCCCCHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCC NLPTPPWVTRVDVVSALEMEQAVQQRAAAQDIFISCAAVADYRAEQISDEKIKKQGDEII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LKMVKNPDIVAGVAAMTKKRPFVVGFAAETQNVEEYARQKLARKKLDLICANDVSLAEHG HHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEECCCCHHHHCC FNSDTNALHLFWQDGEKRLALSDKALLGQRLIDEIVSRYDEKNRR CCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]