| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is kdtX [H]
Identifier: 157373069
GI number: 157373069
Start: 5358197
End: 5358970
Strand: Direct
Name: kdtX [H]
Synonym: Spro_4837
Alternate gene names: 157373069
Gene position: 5358197-5358970 (Clockwise)
Preceding gene: 157373068
Following gene: 157373070
Centisome position: 98.34
GC content: 56.33
Gene sequence:
>774_bases GTGAGCGCGCGCAAAAGTCTGTCGGTGGTGATTATCGCCAAGAACGAAGCCGGGCTGCTGCCGGATTGTCTGCAATCCGT AGCCTGGGCAGACGAAATCGTCATGCTCGACTCAGGCAGTCAGGATGACAGCGTCGCCGTGGCCGAAAGTTTGGGCGCCA AAGTATTCACCCACGTCGACTGGCAGGGATTTGGTAAGCAGCGCCAACTGGCTCAGAGTTACGCCAGCCACGACTATATT CTGATGATCGACGCCGACGAACGCGTTACCCCGGAACTGCGCCAGTCAATTGAACAAACGTTGACTGCGCCGGACGATAA TCAAGTCTACAGCTGCGCACGCCGCAACCTGTTCCTCGGGCGTTTTATGCGTCACAGCGGCTGGTACCCGGATCGCGTCA ACCGGTTGTACGCCAACCAGCGCTATCGCTATAACGACAATCTGGTGCATGAGTCGCTCAATACCAACGGGGCGAAAGTG GTGCCGCTTAACGGCGATCTACTGCATCTGACCTGTCGCGACTTTTTTGCCTTCCAGCGCAAACAGCTACGTTATGCCGA AGAATGGGCCAATCAACGCCACCAGGCCGGCAATCGCTGCGGCTATCTCTCGATCCTGACCCACACTCTGGGTGCCTTCT GCAAAACCTGGCTGCTGCGTGCCGGCTTTCTGGACGGTAAACAGGGGTTGCTGTTAGCCGTGGTCAACGCGCAATATACT TTCAATAAATATGCCGCACTCTGGGCATTGGGCCGCAACTATTCAGAGAAGTGA
Upstream 100 bases:
>100_bases TTACGGCCGCCACGCGGTAGAAGTGCTGTATCAAAACCAGGGAGCGCTGCAGCGCCTGCTGCAATTGTTAGAACCGCATC TGCCGCCCCGGAGTCATTAA
Downstream 100 bases:
>100_bases ATCATGACCCGTAAAGCCATTTATCCCGGTACTTTCGACCCCATGACCAACGGCCACCTGGATTTGGTAACCCGTGCGTC ATTGATGTTCGATCACGTCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSARKSLSVVIIAKNEAGLLPDCLQSVAWADEIVMLDSGSQDDSVAVAESLGAKVFTHVDWQGFGKQRQLAQSYASHDYI LMIDADERVTPELRQSIEQTLTAPDDNQVYSCARRNLFLGRFMRHSGWYPDRVNRLYANQRYRYNDNLVHESLNTNGAKV VPLNGDLLHLTCRDFFAFQRKQLRYAEEWANQRHQAGNRCGYLSILTHTLGAFCKTWLLRAGFLDGKQGLLLAVVNAQYT FNKYAALWALGRNYSEK
Sequences:
>Translated_257_residues MSARKSLSVVIIAKNEAGLLPDCLQSVAWADEIVMLDSGSQDDSVAVAESLGAKVFTHVDWQGFGKQRQLAQSYASHDYI LMIDADERVTPELRQSIEQTLTAPDDNQVYSCARRNLFLGRFMRHSGWYPDRVNRLYANQRYRYNDNLVHESLNTNGAKV VPLNGDLLHLTCRDFFAFQRKQLRYAEEWANQRHQAGNRCGYLSILTHTLGAFCKTWLLRAGFLDGKQGLLLAVVNAQYT FNKYAALWALGRNYSEK >Mature_256_residues SARKSLSVVIIAKNEAGLLPDCLQSVAWADEIVMLDSGSQDDSVAVAESLGAKVFTHVDWQGFGKQRQLAQSYASHDYIL MIDADERVTPELRQSIEQTLTAPDDNQVYSCARRNLFLGRFMRHSGWYPDRVNRLYANQRYRYNDNLVHESLNTNGAKVV PLNGDLLHLTCRDFFAFQRKQLRYAEEWANQRHQAGNRCGYLSILTHTLGAFCKTWLLRAGFLDGKQGLLLAVVNAQYTF NKYAALWALGRNYSEK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 29246; Mature: 29115
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARKSLSVVIIAKNEAGLLPDCLQSVAWADEIVMLDSGSQDDSVAVAESLGAKVFTHVD CCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCEEEECC WQGFGKQRQLAQSYASHDYILMIDADERVTPELRQSIEQTLTAPDDNQVYSCARRNLFLG CCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFMRHSGWYPDRVNRLYANQRYRYNDNLVHESLNTNGAKVVPLNGDLLHLTCRDFFAFQR HHHHHCCCCHHHHHHHHHCCCEECCCCHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHH KQLRYAEEWANQRHQAGNRCGYLSILTHTLGAFCKTWLLRAGFLDGKQGLLLAVVNAQYT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHH FNKYAALWALGRNYSEK HHHHHHHHHHCCCCCCC >Mature Secondary Structure SARKSLSVVIIAKNEAGLLPDCLQSVAWADEIVMLDSGSQDDSVAVAESLGAKVFTHVD CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCEEEECC WQGFGKQRQLAQSYASHDYILMIDADERVTPELRQSIEQTLTAPDDNQVYSCARRNLFLG CCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFMRHSGWYPDRVNRLYANQRYRYNDNLVHESLNTNGAKVVPLNGDLLHLTCRDFFAFQR HHHHHCCCCHHHHHHHHHCCCEECCCCHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHH KQLRYAEEWANQRHQAGNRCGYLSILTHTLGAFCKTWLLRAGFLDGKQGLLLAVVNAQYT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHH FNKYAALWALGRNYSEK HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824620 [H]