| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is psiE
Identifier: 157372708
GI number: 157372708
Start: 4949812
End: 4950219
Strand: Reverse
Name: psiE
Synonym: Spro_4475
Alternate gene names: 157372708
Gene position: 4950219-4949812 (Counterclockwise)
Preceding gene: 157372710
Following gene: 157372704
Centisome position: 90.85
GC content: 43.14
Gene sequence:
>408_bases ATGGCAAAAACCTCTCGTTCGGTGATGATCGCCAAAGGGTTGCAACGGGTGTTGAACGTGGGGCTGTTGCTGCTGGCGGC GATCCTGATCGTCTTTTTGGTGAAAGAAACCATTCATTTGGCGAAAGTCTTATTTGTAAACAACGAGGAATCGACGTCCT ATTTGCTGATTGAAGGGATTGTGATTTACTTCCTCTACTTTGAGTTTATCGCCTTGATTGTGAAGTATTTTGAATCGGGT TATCACTTCCCGCTGCGCTACTTTATTTATATCGGCATCACCGCGATTATTCGTTTGATCATAGTGGATCATGAAAACCC AATAGATACGTTAATTTATTCTGCCGCGATATTGTTGCTGGTGGTGACGCTTTATCTGGCTAACACCGACCGTTTAAAAA GAGAGTAA
Upstream 100 bases:
>100_bases AGTATTTATTTTTTTTAGGCCCTGCGCAGATGTTAATTTTTAAGATAATGCCTATGTTAGGATGCGTGAATAACTACAGT GGTATTTATGGGGAATATTT
Downstream 100 bases:
>100_bases ATACCCGTTGCCTTTCAAGCTGCAGCGTTGTTACCTGCACTCAGTTATGTGGCCCGTCCATGGGCCACACCCCTTTGGGG CCGCTGCAAGCAGCGTTCAA
Product: phosphate-starvation-inducible protein PsiE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAKTSRSVMIAKGLQRVLNVGLLLLAAILIVFLVKETIHLAKVLFVNNEESTSYLLIEGIVIYFLYFEFIALIVKYFESG YHFPLRYFIYIGITAIIRLIIVDHENPIDTLIYSAAILLLVVTLYLANTDRLKRE
Sequences:
>Translated_135_residues MAKTSRSVMIAKGLQRVLNVGLLLLAAILIVFLVKETIHLAKVLFVNNEESTSYLLIEGIVIYFLYFEFIALIVKYFESG YHFPLRYFIYIGITAIIRLIIVDHENPIDTLIYSAAILLLVVTLYLANTDRLKRE >Mature_134_residues AKTSRSVMIAKGLQRVLNVGLLLLAAILIVFLVKETIHLAKVLFVNNEESTSYLLIEGIVIYFLYFEFIALIVKYFESGY HFPLRYFIYIGITAIIRLIIVDHENPIDTLIYSAAILLLVVTLYLANTDRLKRE
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psiE family
Homologues:
Organism=Escherichia coli, GI1790462, Length=104, Percent_Identity=74.0384615384615, Blast_Score=162, Evalue=7e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSIE_SERP5 (A8GKC9)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480697.1 - STRING: A8GKC9 - GeneID: 5606942 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4475 - eggNOG: COG3223 - HOGENOM: HBG341415 - OMA: FQSGYHF - ProtClustDB: PRK02833 - BioCyc: SPRO399741:SPRO_4475-MONOMER - HAMAP: MF_01048 - InterPro: IPR009315 - InterPro: IPR020948 - PIRSF: PIRSF029598
Pfam domain/function: PF06146 PsiE
EC number: NA
Molecular weight: Translated: 15484; Mature: 15353
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x10e59964)-; HASH(0x104f7df4)-; HASH(0x11d08d1c)-; HASH(0x10d3d8a8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTSRSVMIAKGLQRVLNVGLLLLAAILIVFLVKETIHLAKVLFVNNEESTSYLLIEGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VIYFLYFEFIALIVKYFESGYHFPLRYFIYIGITAIIRLIIVDHENPIDTLIYSAAILLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVTLYLANTDRLKRE HHHHHHHCCHHHCCH >Mature Secondary Structure AKTSRSVMIAKGLQRVLNVGLLLLAAILIVFLVKETIHLAKVLFVNNEESTSYLLIEGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VIYFLYFEFIALIVKYFESGYHFPLRYFIYIGITAIIRLIIVDHENPIDTLIYSAAILLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVTLYLANTDRLKRE HHHHHHHCCHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA