Click here to switch to the map view.

The map label for this gene is rng [H]

Identifier: 157372640

GI number: 157372640

Start: 4880148

End: 4881617

Strand: Reverse

Name: rng [H]

Synonym: Spro_4407

Alternate gene names: 157372640

Gene position: 4881617-4880148 (Counterclockwise)

Preceding gene: 157372641

Following gene: 157372639

Centisome position: 89.59

GC content: 54.35

Gene sequence:

>1470_bases
ATGACAGCTGAGCTACTGGTTAATATCACACCGTCTGAAACGCGGGTTGCCTATATTGATGGCGGCATCCTGCAAGAGAT
CCATATCGAGCGCGAATCCAAGCGCGGCATTGTCGGCAATATTTATAAAGGGCGCGTAAGTCGCGTGTTGCCGGGTATGC
AGGCGGCATTCGTCGATATCGGCCTGGACAAAGCGGCCTTCCTGCACGCCTCCGATATCATGCCGCACACCGAATGTGTC
GCCGGTGATGAGCAGAAAAATTTCCACGTGCGCGATATTGCCGAGCTGGTGCGCCAGGGGCAGGATTTGATGGTGCAGGT
GGTGAAAGATCCGCTAGGCACCAAAGGCGCACGCCTGACCACCGACATCACCCTGCCTTCGCGTTACCTGGTGTTCATGC
CGGGGGCGGCGCACGTTGGCGTTTCGCAGCGTATTGAAAGTGAAGCCGAGCGCGATCGCCTGAAAAAAGCCGTCGCCGGT
TACTGCGATGAACTGGGTGGTTTTATCATCCGCACTGCGGCGGAAGGCATTGGTGAAGAAGAGCTGTCGCAAGACGCCGC
CTTCCTCAAGCGCCTGTGGACCAAGGTGATGGAGCGTAAAAAACGCAACCAGACCAAATACAAGTTGTACGGTGAGCTGG
CGCTGGCGCAGCGTATTTTGCGTGACTTCGCCGGTGCTGCACTGGACAGGATCCGCGTGGACTCGCGTCTGACCCACGAT
CTGCTGGTGGAATTTACCGGTGAGTACATCCCGGATATTACCGCCAAGCTGGAGCTGTACACCGGCAGTCAGCCGATCTT
CGATCTGTATGATGTTGAAAACGAGATCCAGCGTGCGCTAGAGCGTAAGGTTGAGCTGAAGTCCGGCGGCTACCTGATCA
TCGACCAGACTGAAGCGATGACCACCGTGGATATCAATACCGGCGCCTTTGTCGGCCATCGCAATCTCGACGAAACCATC
TTCAATACCAATATCGAAGCGACCCAGGCCATTGCCCGCCAACTGCGGCTGCGCAATCTGGGCGGCATTATCATTATCGA
CTTTATTGATATGAATAATGACGAACATCGTCGTCGGGTGCTGCATTCGCTGGAGCTGGCGCTGAGTAAAGATCGGGTAA
AAACCACGATCAACGGCTTCTCTCAGCTAGGCTTAGTTGAAATGACGCGTAAACGCACGCGTGAAAGCATTGAACATGTG
CTGTGCCATGATTGTCCTACTTGTCATGGACGCGGCACCCTGAAAACTGTGGAAACCGTGTGCTACGAAATTTTGCGTGA
AATAGTGCGCGTGCACCATGCTTATGATTCAGATCGTTTCTTGGTTTACGCCTCTGCGGCGGTGGGTGAGGCGCTGAAAA
GCGAAGAGTCCCATGCGCTGGCCGAAGTGGAAATCTTTGTTGGCAAACAGGTCAAGGTGCAGATCGAACCCTTGTACAGC
CAGGAACAATTTGACGTTGTCATGATGTAG

Upstream 100 bases:

>100_bases
TGGTCGAAACACATGAGCTGCTCAGTAATTTTGTCGCATTACGTGATGTAAGAACCGGTTGATGGGCGCTGCCATTATCG
ACCGGCTCTGAGGAGAAGGC

Downstream 100 bases:

>100_bases
TCCGCCCGTTGGCGGCCAAAGTCCGGTATTGGTGGGGCCCAGCATGCTGGGCCTCCCATGCATAGATATCCCGTTGCCAG
GCAGCGGAAGCAAGGAGAAC

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECV
AGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAG
YCDELGGFIIRTAAEGIGEEELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHD
LLVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDETI
FNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRVLHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHV
LCHDCPTCHGRGTLKTVETVCYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM

Sequences:

>Translated_489_residues
MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECV
AGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAG
YCDELGGFIIRTAAEGIGEEELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHD
LLVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDETI
FNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRVLHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHV
LCHDCPTCHGRGTLKTVETVCYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
>Mature_488_residues
TAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVA
GDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAGY
CDELGGFIIRTAAEGIGEEELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHDL
LVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDETIF
NTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRVLHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVL
CHDCPTCHGRGTLKTVETVCYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYSQ
EQFDVVMM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=489, Percent_Identity=89.3660531697341, Blast_Score=888, Evalue=0.0,
Organism=Escherichia coli, GI1787325, Length=431, Percent_Identity=37.8190255220418, Blast_Score=276, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55081; Mature: 54950

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHCC
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
CCCHHHHEEHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAGYCDELGGFIIRTAAEGIGEE
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHH
ELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM
HHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCE
TTVDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRV
EEEECCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
LHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVLCHDCPTCHGRGTLKTVETV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
CYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCC
QEQFDVVMM
CCCCCEEEC
>Mature Secondary Structure 
TAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
CCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHCC
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
CCCHHHHEEHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGAAHVGVSQRIESEAERDRLKKAVAGYCDELGGFIIRTAAEGIGEE
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHH
ELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAQRILRDFAGAALDRIRVDSRLTHD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVEFTGEYIPDITAKLELYTGSQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM
HHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCE
TTVDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRV
EEEECCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
LHSLELALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVLCHDCPTCHGRGTLKTVETV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
CYEILREIVRVHHAYDSDRFLVYASAAVGEALKSEESHALAEVEIFVGKQVKVQIEPLYS
HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCC
QEQFDVVMM
CCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]