| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is sstT
Identifier: 157372552
GI number: 157372552
Start: 4788702
End: 4789937
Strand: Direct
Name: sstT
Synonym: Spro_4319
Alternate gene names: 157372552
Gene position: 4788702-4789937 (Clockwise)
Preceding gene: 157372551
Following gene: 157372555
Centisome position: 87.88
GC content: 58.82
Gene sequence:
>1236_bases ATGCAAAAACTATTACAGAAGATCACTCAGGGCAGTCTGGTCAAACAAATCATGGTCGGCCTGGTGGCCGGTATTATCGT GGCGTTGGTCTCACCGGCAACGGCTTCGGCTGTGGGCTTGCTGGGTGCGCTGTTCGTTGGCGCACTGAAAGCGGTGGCGC CGGTACTGGTGCTGGTGTTGGTCATGGCCTCAATCGCCAATCACAAACACGGGCAGAAAACCAATATCCGGCCGATCCTG TTCCTTTACCTGCTGGGCACTTTCGCTGCGGCGCTGGTGGCGGTCGTGGTCAGCTTTATGTTCCCGTCCAACCTGGCGCT GGTAGCCGGCAATGCCGAGATCAACCCACCGGGCGGCATTATTGAGGTGCTGAAAGGCCTGCTGTTGAGCGTGGTGGCCA ACCCGTTCCAGGCGCTGATTAGCGCTAACTATATTGGTATTCTGGCCTGGGCAGTGGGGCTGGGACTGGCGCTGCGTCAC TCCTCTGACACCACCAAATCATTGATTAACGATATGTCACATGCAGTCACCATGGTGGTGCGTGCGGTGATCCGCTGTGC CCCGCTTGGCATCTTCGGCCTGGTGGCTTCGACGCTGGCCGAAACCGGCTTCGGCGCGCTGTGGGGTTATGCTCAACTGC TGGTGGTACTGATCGGCTGTATGTTGCTGGTCGCACTGGTGCTGAACCCGCTGATCGTTTTCTGGAAAATCCGTCGCAAT CCTTATCCGCTGGTGTTCGCCTGCCTGCGTGAAAGCGGCGTGACCGCATTCTTCACCCGCAGTTCGGCCGCCAATATTCC GGTGAATATGGAGCTGTGCAAAAAACTGAATCTGAACGAAGACACCTATTCGGTTTCTATCCCGCTGGGTGCGACCATCA ATATGGCCGGTGCGGCGATCACCATTACCGTGCTGACGCTGGCGGCGGTGCATACTCTGGGGATCCCGGTTGACGTGCCG ACCGCGCTGCTGCTGAGCGTAGTGGCCGCCGTCTGCGCCTGCGGCGCTTCCGGTGTGGCCGGCGGTTCGCTGTTGCTGAT CCCGTTGGCGTGTAACATGTTCGGCATCCCGAACGACGTGGCCATGCAGGTGGTCGCCGTCGGCTTTATCATCGGCGTGC TGCAAGACTCCGCCGAAACCGCACTGAACTCTTCTACCGACGTCCTGTTTACTGCCGCAGCCTGTCAGGCGGAAGACCAA CGTTTGGCAGATGAAGATCCGCTGAAGGTGCGTTAA
Upstream 100 bases:
>100_bases ATTTGGCAAACACACTTGGTTACAGATTCAAATAAAGTTGTCCGGCGAGGTTCCCGCCGAGATAAAGCTGTAAGCAACAT CATCGGGAAGAAAAAGCACT
Downstream 100 bases:
>100_bases TTTCCGAGCTTATTCAACAAGGCGCTCATTATCGGGCGCCTTTTTTTACCTCAATATCACAGTCCTACAAGGTTACCCCG CTTTTAAAAATCGCCAACTC
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MQKLLQKITQGSLVKQIMVGLVAGIIVALVSPATASAVGLLGALFVGALKAVAPVLVLVLVMASIANHKHGQKTNIRPIL FLYLLGTFAAALVAVVVSFMFPSNLALVAGNAEINPPGGIIEVLKGLLLSVVANPFQALISANYIGILAWAVGLGLALRH SSDTTKSLINDMSHAVTMVVRAVIRCAPLGIFGLVASTLAETGFGALWGYAQLLVVLIGCMLLVALVLNPLIVFWKIRRN PYPLVFACLRESGVTAFFTRSSAANIPVNMELCKKLNLNEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIPVDVP TALLLSVVAAVCACGASGVAGGSLLLIPLACNMFGIPNDVAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACQAEDQ RLADEDPLKVR
Sequences:
>Translated_411_residues MQKLLQKITQGSLVKQIMVGLVAGIIVALVSPATASAVGLLGALFVGALKAVAPVLVLVLVMASIANHKHGQKTNIRPIL FLYLLGTFAAALVAVVVSFMFPSNLALVAGNAEINPPGGIIEVLKGLLLSVVANPFQALISANYIGILAWAVGLGLALRH SSDTTKSLINDMSHAVTMVVRAVIRCAPLGIFGLVASTLAETGFGALWGYAQLLVVLIGCMLLVALVLNPLIVFWKIRRN PYPLVFACLRESGVTAFFTRSSAANIPVNMELCKKLNLNEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIPVDVP TALLLSVVAAVCACGASGVAGGSLLLIPLACNMFGIPNDVAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACQAEDQ RLADEDPLKVR >Mature_411_residues MQKLLQKITQGSLVKQIMVGLVAGIIVALVSPATASAVGLLGALFVGALKAVAPVLVLVLVMASIANHKHGQKTNIRPIL FLYLLGTFAAALVAVVVSFMFPSNLALVAGNAEINPPGGIIEVLKGLLLSVVANPFQALISANYIGILAWAVGLGLALRH SSDTTKSLINDMSHAVTMVVRAVIRCAPLGIFGLVASTLAETGFGALWGYAQLLVVLIGCMLLVALVLNPLIVFWKIRRN PYPLVFACLRESGVTAFFTRSSAANIPVNMELCKKLNLNEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIPVDVP TALLLSVVAAVCACGASGVAGGSLLLIPLACNMFGIPNDVAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACQAEDQ RLADEDPLKVR
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family
Homologues:
Organism=Homo sapiens, GI4827012, Length=241, Percent_Identity=26.1410788381743, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI223468566, Length=261, Percent_Identity=28.3524904214559, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI223468564, Length=255, Percent_Identity=28.6274509803922, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI5032093, Length=304, Percent_Identity=27.9605263157895, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI21314632, Length=278, Percent_Identity=27.3381294964029, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI169790839, Length=270, Percent_Identity=22.5925925925926, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI66773030, Length=272, Percent_Identity=24.2647058823529, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1789473, Length=402, Percent_Identity=78.3582089552239, Blast_Score=620, Evalue=1e-179, Organism=Escherichia coli, GI1789947, Length=359, Percent_Identity=23.9554317548747, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790514, Length=417, Percent_Identity=24.220623501199, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537407, Length=435, Percent_Identity=23.9080459770115, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193206505, Length=270, Percent_Identity=27.4074074074074, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71996953, Length=268, Percent_Identity=25.7462686567164, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71983099, Length=278, Percent_Identity=25.8992805755396, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71983106, Length=278, Percent_Identity=25.8992805755396, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24583025, Length=277, Percent_Identity=26.3537906137184, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137668, Length=277, Percent_Identity=26.3537906137184, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24583023, Length=277, Percent_Identity=26.3537906137184, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SSTT_SERP5 (A8GJX3)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480541.1 - ProteinModelPortal: A8GJX3 - STRING: A8GJX3 - GeneID: 5606618 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4319 - eggNOG: COG3633 - HOGENOM: HBG289387 - OMA: THIRPIL - ProtClustDB: PRK13628 - BioCyc: SPRO399741:SPRO_4319-MONOMER - HAMAP: MF_01582 - InterPro: IPR001991 - InterPro: IPR023025 - PANTHER: PTHR11958 - PRINTS: PR00173
Pfam domain/function: PF00375 SDF
EC number: NA
Molecular weight: Translated: 42594; Mature: 42594
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1; PS00714 NA_DICARBOXYL_SYMP_2; PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1146eb98)-; HASH(0x118f0a04)-; HASH(0x112b0f38)-; HASH(0x118f074c)-; HASH(0x11aeadfc)-; HASH(0x112b8c8c)-; HASH(0x1167eaf4)-; HASH(0x10518b34)-;
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLLQKITQGSLVKQIMVGLVAGIIVALVSPATASAVGLLGALFVGALKAVAPVLVLVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VMASIANHKHGQKTNIRPILFLYLLGTFAAALVAVVVSFMFPSNLALVAGNAEINPPGGI HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCH IEVLKGLLLSVVANPFQALISANYIGILAWAVGLGLALRHSSDTTKSLINDMSHAVTMVV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH RAVIRCAPLGIFGLVASTLAETGFGALWGYAQLLVVLIGCMLLVALVLNPLIVFWKIRRN HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYPLVFACLRESGVTAFFTRSSAANIPVNMELCKKLNLNEDTYSVSIPLGATINMAGAAI CCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCHHH TITVLTLAAVHTLGIPVDVPTALLLSVVAAVCACGASGVAGGSLLLIPLACNMFGIPNDV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHH AMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACQAEDQRLADEDPLKVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHCCCCCCCCCH >Mature Secondary Structure MQKLLQKITQGSLVKQIMVGLVAGIIVALVSPATASAVGLLGALFVGALKAVAPVLVLVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VMASIANHKHGQKTNIRPILFLYLLGTFAAALVAVVVSFMFPSNLALVAGNAEINPPGGI HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCH IEVLKGLLLSVVANPFQALISANYIGILAWAVGLGLALRHSSDTTKSLINDMSHAVTMVV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH RAVIRCAPLGIFGLVASTLAETGFGALWGYAQLLVVLIGCMLLVALVLNPLIVFWKIRRN HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYPLVFACLRESGVTAFFTRSSAANIPVNMELCKKLNLNEDTYSVSIPLGATINMAGAAI CCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCHHH TITVLTLAAVHTLGIPVDVPTALLLSVVAAVCACGASGVAGGSLLLIPLACNMFGIPNDV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHH AMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACQAEDQRLADEDPLKVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA