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The map label for this gene is ygiB [C]

Identifier: 157372507

GI number: 157372507

Start: 4739692

End: 4740354

Strand: Direct

Name: ygiB [C]

Synonym: Spro_4274

Alternate gene names: 157372507

Gene position: 4739692-4740354 (Clockwise)

Preceding gene: 157372502

Following gene: 157372508

Centisome position: 86.99

GC content: 60.18

Gene sequence:

>663_bases
ATGAAACGGACAAAAAACATCAACCGAGAGACGTTCCGCAAATCCTGGCGCGACTACCGCGTTGCGCCCGTAGCTTTGGC
GATCAGCGCAGTCTTTATGCTGGCCGGCTGCGAGAAGAGCGATGAAACGGTCTCTATGTATCAAAATGCCGACGACTGTT
CGCGCACCAACCCTTCGATGAGCGAGCAGTGCACCACTGCCTATAACAACGCCCTGAAAGAAGCCGAAAAAACCGCGCCG
AAATACGCGACTCGCGAAGACTGTGTCGCCGAGTTCGGTGAAGCGCAGTGTACTCAGGCACCGGCTCCGGCACAGGCCGG
CATGGCTGCAGAGTCACAGAGCAGCGGCAGCATGTGGATGCCGCTGATGGCGGGTTACATGATGGGCCGCATGATGGGCG
GCTCCGGCTTTGCTCAACAGCCTCTGTTCACCTCTAAAAACGCCGCCAGCCCGGCCAACGGCAAATTCGTTGATGCCTCT
GGCAAGAGCTACGGCCCGGCCACCGCAGGCGGCCGTACCATGACGGTGCCAAAAACCGCCATGGCGCCGAAACCGGCAGT
GACCAATACCGTCACCCGTGGTGGCTTTGGCGAATCCGTCGCCAAGCAGACCAGCATGCAGCGCAGCAGCGCGACCTCCA
GCTCACGCAGCATGGGCGGTTAA

Upstream 100 bases:

>100_bases
TCCGTAAGTATTTCAGCTTTAATTTTGACCATCTTTACCCTATCCTTACCGCCATTACTGGGAATGGGCGAATACAGCCC
GACTGATGGGATGAATAACG

Downstream 100 bases:

>100_bases
TGCATGAAACGCGTTGCGATCACCGAGCGCCCGGACTGGCGCGAAAAAGCCACCGAATTCGGCTTCCGCTTCCACACCAT
GTATGGCGAACCCTACTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKRTKNINRETFRKSWRDYRVAPVALAISAVFMLAGCEKSDETVSMYQNADDCSRTNPSMSEQCTTAYNNALKEAEKTAP
KYATREDCVAEFGEAQCTQAPAPAQAGMAAESQSSGSMWMPLMAGYMMGRMMGGSGFAQQPLFTSKNAASPANGKFVDAS
GKSYGPATAGGRTMTVPKTAMAPKPAVTNTVTRGGFGESVAKQTSMQRSSATSSSRSMGG

Sequences:

>Translated_220_residues
MKRTKNINRETFRKSWRDYRVAPVALAISAVFMLAGCEKSDETVSMYQNADDCSRTNPSMSEQCTTAYNNALKEAEKTAP
KYATREDCVAEFGEAQCTQAPAPAQAGMAAESQSSGSMWMPLMAGYMMGRMMGGSGFAQQPLFTSKNAASPANGKFVDAS
GKSYGPATAGGRTMTVPKTAMAPKPAVTNTVTRGGFGESVAKQTSMQRSSATSSSRSMGG
>Mature_220_residues
MKRTKNINRETFRKSWRDYRVAPVALAISAVFMLAGCEKSDETVSMYQNADDCSRTNPSMSEQCTTAYNNALKEAEKTAP
KYATREDCVAEFGEAQCTQAPAPAQAGMAAESQSSGSMWMPLMAGYMMGRMMGGSGFAQQPLFTSKNAASPANGKFVDAS
GKSYGPATAGGRTMTVPKTAMAPKPAVTNTVTRGGFGESVAKQTSMQRSSATSSSRSMGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family

Homologues:

Organism=Escherichia coli, GI145693179, Length=226, Percent_Identity=74.7787610619469, Blast_Score=334, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4274_SERP5 (A8GJS8)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001480496.1
- STRING:   A8GJS8
- GeneID:   5605094
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_4274
- eggNOG:   COG5463
- HOGENOM:   HBG752366
- OMA:   SPANGQF
- ProtClustDB:   PRK11653
- BioCyc:   SPRO399741:SPRO_4274-MONOMER
- HAMAP:   MF_01188
- InterPro:   IPR009576

Pfam domain/function: PF06693 DUF1190

EC number: NA

Molecular weight: Translated: 23292; Mature: 23292

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTKNINRETFRKSWRDYRVAPVALAISAVFMLAGCEKSDETVSMYQNADDCSRTNPSM
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCH
SEQCTTAYNNALKEAEKTAPKYATREDCVAEFGEAQCTQAPAPAQAGMAAESQSSGSMWM
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCHHHCCCCCCCCCCCCHH
PLMAGYMMGRMMGGSGFAQQPLFTSKNAASPANGKFVDASGKSYGPATAGGRTMTVPKTA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCHHH
MAPKPAVTNTVTRGGFGESVAKQTSMQRSSATSSSRSMGG
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MKRTKNINRETFRKSWRDYRVAPVALAISAVFMLAGCEKSDETVSMYQNADDCSRTNPSM
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCH
SEQCTTAYNNALKEAEKTAPKYATREDCVAEFGEAQCTQAPAPAQAGMAAESQSSGSMWM
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCHHHCCCCCCCCCCCCHH
PLMAGYMMGRMMGGSGFAQQPLFTSKNAASPANGKFVDASGKSYGPATAGGRTMTVPKTA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCHHH
MAPKPAVTNTVTRGGFGESVAKQTSMQRSSATSSSRSMGG
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA