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The map label for this gene is traC [H]

Identifier: 157372292

GI number: 157372292

Start: 4497973

End: 4498983

Strand: Reverse

Name: traC [H]

Synonym: Spro_4058

Alternate gene names: 157372292

Gene position: 4498983-4497973 (Counterclockwise)

Preceding gene: 157372293

Following gene: 157372291

Centisome position: 82.57

GC content: 59.15

Gene sequence:

>1011_bases
ATGAAGAAATCATCATCATCACGTCGGCCGGCAAAAGCCCGTCGCGAACGTCCTGACCTGTACCAACAGGTCACGGACAA
AATCATTGCCGCCATCGAGACGGGAACCTTGCCCTGGCGTAAGCCCTGGCGGACCGATAAGGCCCGCAGTGCGTCGACCA
GCATCATGCCGCAGAACGGCACAACCGGTTACCACTACAGCGGTGTGAATGTGCTGCTGTTGTGGATGGCCGCGGACGAA
AGGGGGTTTCACTCCCATCGCTGGCTGACCTACAAGCAGGCGGAAGCCGTCGGTGGCCATGTGCGCGCTGGCGAAACAGC
CACCCTGGCCGTGGTATTCAAATCCTGGGACAAGCAGGTGGAGGATGCTGATGGCCGGCAGCTGTTTGACGAGGAGGGGA
ACCCGCTGAAAACGCGAATACCCATGCTGAAGCCGCTGTACCTGTTTAACGTGGCACAATGCGACAACCTCCCGGAAACC
GTTGTCGGCGTTACGCCGGCAGAAGTGCCGGAAGAGGAGGGGGCGTTGGTTGATACGAAAACGCAGGCTCAGGTCAGCAC
CCTCGTTGATGCCAGTGGCGTTCGGCTCGAACAGGTGTACCAGGACCGGGCATTTTACTCCCCGATCCGCGACCAGATTG
TCCTGCCGCAGGTTCAACAATTTCGGACCGAGGCGGATTACTGGTCGACGTTATTGCATGAACTGGTGCACAGCACCGGT
CATGCAACACGGCTCAACCGGGAGGGGATCACGTCTTCCTCCCGGGCGTTCGGAGATCCGGTGTATGCGTTCGAGGAACT
GGTGGCGGAGCTGGGCAGTGCTTTTATGTGCGCGCAGCTTGGCATCTTTGGCGACATCCAGCACGACAGCTACCTCGAGC
ACTGGCTCAAGGTATTGCGTGAGGATAAGCGTGCGTTGTTTCGTGCAGCCAAACAGGCCCGTGAGGCGTCAGAGTTTTTA
CTGAAGCCCTTGGCGGAACCGGTGACAACCGAGTCTGCCGTTGCGGCATGA

Upstream 100 bases:

>100_bases
GGGGCGCTGCGTTACCCTGCGTTCTAACCACTTTTCTGTCCCCTGGGGCGTATTCTTCGCCGCCAGGGGAGGAATGCGCC
TTTTTTACGAGGAGCACTCC

Downstream 100 bases:

>100_bases
GGAGACGGGTGATGACGATGGAACAATGTTACTGGCAGACCATTGCCGGCAGGTTACTGGCCAAATACTTTGGTCTGACG
TTAAACGATACCGATTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Replication primase [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKKSSSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNGTTGYHYSGVNVLLLWMAADE
RGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQVEDADGRQLFDEEGNPLKTRIPMLKPLYLFNVAQCDNLPET
VVGVTPAEVPEEEGALVDTKTQAQVSTLVDASGVRLEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTG
HATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLREDKRALFRAAKQAREASEFL
LKPLAEPVTTESAVAA

Sequences:

>Translated_336_residues
MKKSSSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNGTTGYHYSGVNVLLLWMAADE
RGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQVEDADGRQLFDEEGNPLKTRIPMLKPLYLFNVAQCDNLPET
VVGVTPAEVPEEEGALVDTKTQAQVSTLVDASGVRLEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTG
HATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLREDKRALFRAAKQAREASEFL
LKPLAEPVTTESAVAA
>Mature_336_residues
MKKSSSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNGTTGYHYSGVNVLLLWMAADE
RGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQVEDADGRQLFDEEGNPLKTRIPMLKPLYLFNVAQCDNLPET
VVGVTPAEVPEEEGALVDTKTQAQVSTLVDASGVRLEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTG
HATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLREDKRALFRAAKQAREASEFL
LKPLAEPVTTESAVAA

Specific function: Required for autonomous replication in E.coli. Transferred into the recipient cell during bacterial conjugation. Catalyzes the synthesis of short oligoribonucleotide primers with CpA or pCpA at their 5'-termini on a single stranded template DNA [H]

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013610
- InterPro:   IPR006171 [H]

Pfam domain/function: PF08401 DUF1738; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 37690; Mature: 37690

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNG
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTGYHYSGVNVLLLWMAADERGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQV
CCCEEECCCEEEEEEEECCCCCCCCCCEEEHHHHHHCCCCEECCCCEEEEHHHHHHHHHH
EDADGRQLFDEEGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGVTPAEVPEEEGALVDTK
CCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEECCC
TQAQVSTLVDASGVRLEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHCCC
HATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLR
CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
EDKRALFRAAKQAREASEFLLKPLAEPVTTESAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MKKSSSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNG
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTGYHYSGVNVLLLWMAADERGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQV
CCCEEECCCEEEEEEEECCCCCCCCCCEEEHHHHHHCCCCEECCCCEEEEHHHHHHHHHH
EDADGRQLFDEEGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGVTPAEVPEEEGALVDTK
CCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEECCC
TQAQVSTLVDASGVRLEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHCCC
HATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLR
CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
EDKRALFRAAKQAREASEFLLKPLAEPVTTESAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]