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The map label for this gene is yubA [H]

Identifier: 157372290

GI number: 157372290

Start: 4496635

End: 4497576

Strand: Reverse

Name: yubA [H]

Synonym: Spro_4056

Alternate gene names: 157372290

Gene position: 4497576-4496635 (Counterclockwise)

Preceding gene: 157372291

Following gene: 157372289

Centisome position: 82.54

GC content: 56.16

Gene sequence:

>942_bases
ATGAAGAGGAGAAAGACCATGTCCAACTGGTGCAAAAACCGTTTAGTGATCACTGGCCAATCCGTGTTTGTGGATGAACT
GCAGCAATGGGTCAATGGCCATGTTGTGCCTGACTACCGTCATGCCATTCAACAGAGCTGCCGGCTATTTCTGGCAGGCT
GCGCCGGCATACTGAAGCCGGCCACAACAAAACCTGGGGTTTATGTGCCCTATCCGGATCTGTTAACACATCCGGGGATC
GCATCACCTCAGAATCTGGCCTTTGAACACTGGTTTGGGTTGCTGAAGGCTGATATCCCGTTAACGGCCGAAAATGTTCG
TTTGATTGAGCGTCTCTATCGCCAGTCGGGAATTGACGCCGTGAAATGGGAGAACATCCCCAACGTCGCGAAGGAGCGTA
TGGCGGATGTACTGTCTCGCCAGTATGCGGACTGGTTCGGCCTGGTGGGGGTGAGTCCTGACATCGATGCTGGCCTTTGC
TGGGAGCGTTTGGGCATGATGCCTGAGTACACCGCACCGTGCGATATGCTGATGCTGATCCCGACGCGTCTGGCGACCGA
ACTGAATGGTTCAGGTGCTTTGTTACGTGATGTGCCGACCACGGCCGATCTCTATGGTCGCCAGTACGGCGTCGAATGGC
CATCAGGCCATAATGCCGGTTGTGTGCGGGACGGCATCAACACGTTGACGGTGCACTTTGATTCCCCGTGGTACCCGCCA
GCCGGCGAGGTTATCGGGACAGTGTCGGAGCGGTTCAGTTGCCAGGTGGAACATACCTGGTACATGCCTGATGCGGAACG
CAGTGGTTACGATCGCTACGACCGCGGCGAGCATGTCGACGGCGGACGAATAGCGGCTGAGGTTGAGGCCGGTGAGGTGA
TCCACCTGACCTACGCCGACAAGGATTCTGTGCCGTTGTCACTGAATTCAGTTGCTGGCTAA

Upstream 100 bases:

>100_bases
CCATAACGGGCAGGACAGTACCCTCGTCCTGGCCATCATGATTTAACACCTAACCCATCGGGGGAGTTATTCCCCCGCTG
GGGAAAGCTCCCTCTTTTTT

Downstream 100 bases:

>100_bases
TCATCGAGTTTTGTTAACGTATTAACCTATGGCCACCGATGTTCGGTGGTCTTTTTTTTCCCGTGGGGGAGTTCTCCCAC
TGCGGGTGAGCTCCCTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKRRKTMSNWCKNRLVITGQSVFVDELQQWVNGHVVPDYRHAIQQSCRLFLAGCAGILKPATTKPGVYVPYPDLLTHPGI
ASPQNLAFEHWFGLLKADIPLTAENVRLIERLYRQSGIDAVKWENIPNVAKERMADVLSRQYADWFGLVGVSPDIDAGLC
WERLGMMPEYTAPCDMLMLIPTRLATELNGSGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTVHFDSPWYPP
AGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAGEVIHLTYADKDSVPLSLNSVAG

Sequences:

>Translated_313_residues
MKRRKTMSNWCKNRLVITGQSVFVDELQQWVNGHVVPDYRHAIQQSCRLFLAGCAGILKPATTKPGVYVPYPDLLTHPGI
ASPQNLAFEHWFGLLKADIPLTAENVRLIERLYRQSGIDAVKWENIPNVAKERMADVLSRQYADWFGLVGVSPDIDAGLC
WERLGMMPEYTAPCDMLMLIPTRLATELNGSGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTVHFDSPWYPP
AGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAGEVIHLTYADKDSVPLSLNSVAG
>Mature_313_residues
MKRRKTMSNWCKNRLVITGQSVFVDELQQWVNGHVVPDYRHAIQQSCRLFLAGCAGILKPATTKPGVYVPYPDLLTHPGI
ASPQNLAFEHWFGLLKADIPLTAENVRLIERLYRQSGIDAVKWENIPNVAKERMADVLSRQYADWFGLVGVSPDIDAGLC
WERLGMMPEYTAPCDMLMLIPTRLATELNGSGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTVHFDSPWYPP
AGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAGEVIHLTYADKDSVPLSLNSVAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023136
- InterPro:   IPR009694 [H]

Pfam domain/function: PF06924 DUF1281 [H]

EC number: NA

Molecular weight: Translated: 34892; Mature: 34892

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRKTMSNWCKNRLVITGQSVFVDELQQWVNGHVVPDYRHAIQQSCRLFLAGCAGILKP
CCCCHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ATTKPGVYVPYPDLLTHPGIASPQNLAFEHWFGLLKADIPLTAENVRLIERLYRQSGIDA
CCCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
VKWENIPNVAKERMADVLSRQYADWFGLVGVSPDIDAGLCWERLGMMPEYTAPCDMLMLI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
PTRLATELNGSGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTVHFDSPWYPP
HHHHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCC
AGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAGEVIHLTYAD
HHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECC
KDSVPLSLNSVAG
CCCCCEEHHCCCC
>Mature Secondary Structure
MKRRKTMSNWCKNRLVITGQSVFVDELQQWVNGHVVPDYRHAIQQSCRLFLAGCAGILKP
CCCCHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ATTKPGVYVPYPDLLTHPGIASPQNLAFEHWFGLLKADIPLTAENVRLIERLYRQSGIDA
CCCCCCEEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
VKWENIPNVAKERMADVLSRQYADWFGLVGVSPDIDAGLCWERLGMMPEYTAPCDMLMLI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
PTRLATELNGSGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTVHFDSPWYPP
HHHHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCC
AGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAGEVIHLTYAD
HHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECC
KDSVPLSLNSVAG
CCCCCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10366527 [H]