| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fhuA [H]
Identifier: 157372213
GI number: 157372213
Start: 4410208
End: 4412397
Strand: Reverse
Name: fhuA [H]
Synonym: Spro_3979
Alternate gene names: 157372213
Gene position: 4412397-4410208 (Counterclockwise)
Preceding gene: 157372214
Following gene: 157372212
Centisome position: 80.98
GC content: 54.84
Gene sequence:
>2190_bases ATGTCGACCAAGCGTCTTTCATCTTCCGGGGCCAAGCAGGGCCGCACTCATGTCAGTGGGTTAGCGATAACTATCGCTGC CGCACTTGGTACGCTGGCGATGCCGGCATTTTCCGCCGACACCAAGGAAGAGACCCTTACCGTGGTGGGCAGCAGCCAAC CGCAGCAGGAAAGCGCCTGGGGGCCGGTCGGCACCTATGTGGCCAAGCACAGCGCCACCGGTACCAAAACCGATACGCCG ATCGAAAAGACCCCGCAGTCGATTTCCGTGGTAACGCGTGAAGAGATGGATATGCGCCAGCCGGAGACGGTGAAAGGTGC GCTGGCTTATTCGCCGGGGGTGATGGTGGGCAACCGTGGTGCCTCCACCGCCTACGATGCCGTGAACATTCGTGGCTTCA GTTCGGTAGGTACCAATATGTACCTCGACGGCCTGAAACTGCAGGACGACAACTACTCCATTTACCAGATCGATCCTTAC TTCCTTGAGCGTGCCGAAGTGCTGCGTGGTCCTTCTTCGGTACTCTATGGCAAGAGCAATCCGGGTGGAGTCGTCGCTCT GGTCAGCAAACGCCCGACCACCGAAAGCCTGCGTGAAGTTCAGTTCAAGATGGGTACCGACAACCTGTTCCAGACCGGTT TCGATTTTGGCGGCGCAGTGGATGATGATGGTGTTTACTCTTACCGTTTGACAGGTCTGGCGCGTGATGAAGATCAGCAG CAGGTGGGCGAAAAGAGTAAGCGCTATGCTATCGCGCCTTCTTTCAGTTGGCGGCCGGATGATCGTACTTCTTTGACTTT CCTCAGCAGTTTCCAGGATGATCCTGACCTGGGCTTCTATGGCTGGCTGCCGAAAGAGGGCACGGTGCAAAATGGCATCA ACGGCAAGTTGCCAACCAGTTTCAACGACGGTGAGCCGGGTTATAACAACATCTCGCGCAAGCAACAGATGGTCGGTTAT GCCTTCGAGCACGGTTTTGACGACGTGTGGACGGTGCGCCAAAACCTGCGTTACTCAAAAATGGATCTTGATTACCGTTC CATTTATGGTCAGGGCATCAGTCCGACTAACCCGGCAGAACTGACGCGTGGCGTGATGAACTCGAAAGAGCATTTGTCGA GCTTTGCGGTGGACACCCAGGCCCAGGCAAAATTTGCCACCGGCGTGGTTGATCATACCTTGCTGATGGGGGTGGACTAC ATGCGCATGCGCAATGACGTCGTCTATCAGTACGGCACCGCTTCCCCGCTGAATGTCGTAGCTCCACAGTACGGCAACCA AAATTACACCATTACCGGTGGTGCAAGTCAGGTCAATCGTCAGGAGCAAACCGGGCTTTACGTACAGGATCAGGCCGAGT GGAATCAATGGGTGCTGACCATGGGAGGGCGCTATGACTGGAGCGATACCAACAGCACCAACCGTTTGAATCAGAACTCG GTATCCAAGCAAAAAGACAACGAATTCACCGGCCGGGCTGGCTTGAATTATGTCTTTGAAAACGGTATTGCGCCGTATGT CAGCTACAGTGAATCCTTTGAGCCGACTTCCGGCACGGACTTCAGTGGTAACACCTTCGCCGCCTCCAAGGGCAAGCAGT ATGAAGCCGGTGTGAAGTTTGCGCCGAAAGATCGTCCTATTACTGCCAGCATGGCGATCTATCAGCTGACCAAGACCAAC AACAAGGTGGCTGACCCTAATCCAGATCATCCATTCGCCAGCGTGCAGGGCGGCGAGATCCGTTCCCGCGGGGTCGAACT GGAAGCCAAAGCCGCGCTGTCGGCCAACCTTAATCTGCTGGGTTCTTATACCTACACGGATGCCGAGTATTCCAAAGACA CTACGCTGCAGGGCAATACCCCTGCCGCGATCCCAAAACATATGGCTTCACTGTGGGCGGATTACACCTTCCATGAAACC GCCATCAGTGGCCTGACCCTGGGGTCTGGTGTTCGCTATGTCGGCTCCAGCTATGGTGATGAAGCCAATACCTTTAAAGT GAAAGACTACACGGTGGTTGATGCTGCGATAAAATACGATCTGGCGCGTTTCAATCTGCCGGGTTCCTCGATTGGCATCA ATGTGAATAACCTGTTTGATAAAGAATACGTCTCTAGCTGCTTTGCCACCTACGGCTGCTATTGGGGCGCAGAACGCCAG GTGGTCGCCACCGCAACCTTCCGCTTCTAA
Upstream 100 bases:
>100_bases TGAGCTTGCAGTTTAATTTGGCTTCTGCATAAAATGCGGCGCTTATAATAATTATTATCGTTTACATTCGTCATCAAATA ATTTACCAGAGAAACCATCT
Downstream 100 bases:
>100_bases CCGGATCACCGGGGCGGCATCATGTCGCCCCGGAAAAAGTAGGACCTATGCAGGATAAACACCCCAATCACGACGCCACT TTTACGTTAGACAGCGCCAG
Product: ferrichrome outer membrane transporter
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MSTKRLSSSGAKQGRTHVSGLAITIAAALGTLAMPAFSADTKEETLTVVGSSQPQQESAWGPVGTYVAKHSATGTKTDTP IEKTPQSISVVTREEMDMRQPETVKGALAYSPGVMVGNRGASTAYDAVNIRGFSSVGTNMYLDGLKLQDDNYSIYQIDPY FLERAEVLRGPSSVLYGKSNPGGVVALVSKRPTTESLREVQFKMGTDNLFQTGFDFGGAVDDDGVYSYRLTGLARDEDQQ QVGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDDPDLGFYGWLPKEGTVQNGINGKLPTSFNDGEPGYNNISRKQQMVGY AFEHGFDDVWTVRQNLRYSKMDLDYRSIYGQGISPTNPAELTRGVMNSKEHLSSFAVDTQAQAKFATGVVDHTLLMGVDY MRMRNDVVYQYGTASPLNVVAPQYGNQNYTITGGASQVNRQEQTGLYVQDQAEWNQWVLTMGGRYDWSDTNSTNRLNQNS VSKQKDNEFTGRAGLNYVFENGIAPYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKFAPKDRPITASMAIYQLTKTN NKVADPNPDHPFASVQGGEIRSRGVELEAKAALSANLNLLGSYTYTDAEYSKDTTLQGNTPAAIPKHMASLWADYTFHET AISGLTLGSGVRYVGSSYGDEANTFKVKDYTVVDAAIKYDLARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAERQ VVATATFRF
Sequences:
>Translated_729_residues MSTKRLSSSGAKQGRTHVSGLAITIAAALGTLAMPAFSADTKEETLTVVGSSQPQQESAWGPVGTYVAKHSATGTKTDTP IEKTPQSISVVTREEMDMRQPETVKGALAYSPGVMVGNRGASTAYDAVNIRGFSSVGTNMYLDGLKLQDDNYSIYQIDPY FLERAEVLRGPSSVLYGKSNPGGVVALVSKRPTTESLREVQFKMGTDNLFQTGFDFGGAVDDDGVYSYRLTGLARDEDQQ QVGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDDPDLGFYGWLPKEGTVQNGINGKLPTSFNDGEPGYNNISRKQQMVGY AFEHGFDDVWTVRQNLRYSKMDLDYRSIYGQGISPTNPAELTRGVMNSKEHLSSFAVDTQAQAKFATGVVDHTLLMGVDY MRMRNDVVYQYGTASPLNVVAPQYGNQNYTITGGASQVNRQEQTGLYVQDQAEWNQWVLTMGGRYDWSDTNSTNRLNQNS VSKQKDNEFTGRAGLNYVFENGIAPYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKFAPKDRPITASMAIYQLTKTN NKVADPNPDHPFASVQGGEIRSRGVELEAKAALSANLNLLGSYTYTDAEYSKDTTLQGNTPAAIPKHMASLWADYTFHET AISGLTLGSGVRYVGSSYGDEANTFKVKDYTVVDAAIKYDLARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAERQ VVATATFRF >Mature_728_residues STKRLSSSGAKQGRTHVSGLAITIAAALGTLAMPAFSADTKEETLTVVGSSQPQQESAWGPVGTYVAKHSATGTKTDTPI EKTPQSISVVTREEMDMRQPETVKGALAYSPGVMVGNRGASTAYDAVNIRGFSSVGTNMYLDGLKLQDDNYSIYQIDPYF LERAEVLRGPSSVLYGKSNPGGVVALVSKRPTTESLREVQFKMGTDNLFQTGFDFGGAVDDDGVYSYRLTGLARDEDQQQ VGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDDPDLGFYGWLPKEGTVQNGINGKLPTSFNDGEPGYNNISRKQQMVGYA FEHGFDDVWTVRQNLRYSKMDLDYRSIYGQGISPTNPAELTRGVMNSKEHLSSFAVDTQAQAKFATGVVDHTLLMGVDYM RMRNDVVYQYGTASPLNVVAPQYGNQNYTITGGASQVNRQEQTGLYVQDQAEWNQWVLTMGGRYDWSDTNSTNRLNQNSV SKQKDNEFTGRAGLNYVFENGIAPYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKFAPKDRPITASMAIYQLTKTNN KVADPNPDHPFASVQGGEIRSRGVELEAKAALSANLNLLGSYTYTDAEYSKDTTLQGNTPAAIPKHMASLWADYTFHETA ISGLTLGSGVRYVGSSYGDEANTFKVKDYTVVDAAIKYDLARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAERQV VATATFRF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=752, Percent_Identity=57.5797872340426, Blast_Score=842, Evalue=0.0, Organism=Escherichia coli, GI1787024, Length=781, Percent_Identity=24.8399487836108, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI1787344, Length=783, Percent_Identity=24.1379310344828, Blast_Score=129, Evalue=7e-31, Organism=Escherichia coli, GI1788478, Length=178, Percent_Identity=27.5280898876405, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79824; Mature: 79693
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKRLSSSGAKQGRTHVSGLAITIAAALGTLAMPAFSADTKEETLTVVGSSQPQQESAW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC GPVGTYVAKHSATGTKTDTPIEKTPQSISVVTREEMDMRQPETVKGALAYSPGVMVGNRG CCHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEHHHHCCCCCCHHCEEEEECCCEEECCCC ASTAYDAVNIRGFSSVGTNMYLDGLKLQDDNYSIYQIDPYFLERAEVLRGPSSVLYGKSN CCCCCCEEEECCCCCCCCCEEECCEEEECCCEEEEEECHHHHHHHHHHCCCCCEEECCCC PGGVVALVSKRPTTESLREVQFKMGTDNLFQTGFDFGGAVDDDGVYSYRLTGLARDEDQQ CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHH QVGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDDPDLGFYGWLPKEGTVQNGINGKLPTS HHHHHHCCEEECCCCCCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC FNDGEPGYNNISRKQQMVGYAFEHGFDDVWTVRQNLRYSKMDLDYRSIYGQGISPTNPAE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCHHHHCCCCCCCCCHHH LTRGVMNSKEHLSSFAVDTQAQAKFATGVVDHTLLMGVDYMRMRNDVVYQYGTASPLNVV HHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEE APQYGNQNYTITGGASQVNRQEQTGLYVQDQAEWNQWVLTMGGRYDWSDTNSTNRLNQNS CCCCCCCCEEEECCHHHCCCHHHCCEEEEECCCCCEEEEEECCEECCCCCCCCCCCCCCC VSKQKDNEFTGRAGLNYVFENGIAPYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKF CCHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEE APKDRPITASMAIYQLTKTNNKVADPNPDHPFASVQGGEIRSRGVELEAKAALSANLNLL CCCCCCEEHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCEEE GSYTYTDAEYSKDTTLQGNTPAAIPKHMASLWADYTFHETAISGLTLGSGVRYVGSSYGD EEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHCCEEECCCHHHHCCCCCC EANTFKVKDYTVVDAAIKYDLARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAERQ CCCEEEEEEEEEEHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCE VVATATFRF EEEEEEECC >Mature Secondary Structure STKRLSSSGAKQGRTHVSGLAITIAAALGTLAMPAFSADTKEETLTVVGSSQPQQESAW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC GPVGTYVAKHSATGTKTDTPIEKTPQSISVVTREEMDMRQPETVKGALAYSPGVMVGNRG CCHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEHHHHCCCCCCHHCEEEEECCCEEECCCC ASTAYDAVNIRGFSSVGTNMYLDGLKLQDDNYSIYQIDPYFLERAEVLRGPSSVLYGKSN CCCCCCEEEECCCCCCCCCEEECCEEEECCCEEEEEECHHHHHHHHHHCCCCCEEECCCC PGGVVALVSKRPTTESLREVQFKMGTDNLFQTGFDFGGAVDDDGVYSYRLTGLARDEDQQ CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHH QVGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDDPDLGFYGWLPKEGTVQNGINGKLPTS HHHHHHCCEEECCCCCCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC FNDGEPGYNNISRKQQMVGYAFEHGFDDVWTVRQNLRYSKMDLDYRSIYGQGISPTNPAE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCHHHHCCCCCCCCCHHH LTRGVMNSKEHLSSFAVDTQAQAKFATGVVDHTLLMGVDYMRMRNDVVYQYGTASPLNVV HHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEE APQYGNQNYTITGGASQVNRQEQTGLYVQDQAEWNQWVLTMGGRYDWSDTNSTNRLNQNS CCCCCCCCEEEECCHHHCCCHHHCCEEEEECCCCCEEEEEECCEECCCCCCCCCCCCCCC VSKQKDNEFTGRAGLNYVFENGIAPYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKF CCHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEE APKDRPITASMAIYQLTKTNNKVADPNPDHPFASVQGGEIRSRGVELEAKAALSANLNLL CCCCCCEEHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCEEE GSYTYTDAEYSKDTTLQGNTPAAIPKHMASLWADYTFHETAISGLTLGSGVRYVGSSYGD EEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHCCEEECCCHHHHCCCCCC EANTFKVKDYTVVDAAIKYDLARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAERQ CCCEEEEEEEEEEHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCE VVATATFRF EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]