| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is csaA [H]
Identifier: 157372185
GI number: 157372185
Start: 4377647
End: 4377985
Strand: Direct
Name: csaA [H]
Synonym: Spro_3951
Alternate gene names: 157372185
Gene position: 4377647-4377985 (Clockwise)
Preceding gene: 157372177
Following gene: 157372186
Centisome position: 80.34
GC content: 43.66
Gene sequence:
>339_bases ATGACCATGGCCGAATTAACCGATTTTATGAAGCTGGATATGCGCATCGGCGAAATCATCTCTGTCGAATATAACGATAA GGCATTAAAGCCGGCGTATAAGTTGCAGATCGATTTTGGCGAAGAGATCGGCGTGAAAAACAGCTCAGCACAGTTATGTG AAAACTATAAAAAAGATGAACTGCTTGGCCAGAAAGTTATTTCCGTAGTTAATTTTCCCGCCAAACGGGTCGCCGGATTT AAATCCGAAGTATTGGTACTTGCTGCAGTCACCAGGGATAAAGGAACCGTCTTGCTGAAACCCGATTTCGACGTTGAGAT CGGCAGCAAGGTTTTATAA
Upstream 100 bases:
>100_bases ACTCCACGGGTGGTTAATTTATATTCTCCACCACCGTTCGCAAGTTGTCGACTTTTCCTCCCTTTGCTAGCCTTCTGGTG GTCTCTCATTTATCAGGCGA
Downstream 100 bases:
>100_bases CTGTCAGTTTATCCTAATCCAAGAGGCAATAGAGCAATGCAACAGCTATCTCAGCTTGACGCTATAAAGAAGGAATACCA GGAAAAGCGCTCTGTGTTTA
Product: export-related chaperone CsaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTMAELTDFMKLDMRIGEIISVEYNDKALKPAYKLQIDFGEEIGVKNSSAQLCENYKKDELLGQKVISVVNFPAKRVAGF KSEVLVLAAVTRDKGTVLLKPDFDVEIGSKVL
Sequences:
>Translated_112_residues MTMAELTDFMKLDMRIGEIISVEYNDKALKPAYKLQIDFGEEIGVKNSSAQLCENYKKDELLGQKVISVVNFPAKRVAGF KSEVLVLAAVTRDKGTVLLKPDFDVEIGSKVL >Mature_111_residues TMAELTDFMKLDMRIGEIISVEYNDKALKPAYKLQIDFGEEIGVKNSSAQLCENYKKDELLGQKVISVVNFPAKRVAGFK SEVLVLAAVTRDKGTVLLKPDFDVEIGSKVL
Specific function: Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein [H]
COG id: COG0073
COG function: function code R; EMAP domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR008231 - InterPro: IPR002547 [H]
Pfam domain/function: PF01588 tRNA_bind [H]
EC number: NA
Molecular weight: Translated: 12456; Mature: 12325
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMAELTDFMKLDMRIGEIISVEYNDKALKPAYKLQIDFGEEIGVKNSSAQLCENYKKDE CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCHHH LLGQKVISVVNFPAKRVAGFKSEVLVLAAVTRDKGTVLLKPDFDVEIGSKVL HHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TMAELTDFMKLDMRIGEIISVEYNDKALKPAYKLQIDFGEEIGVKNSSAQLCENYKKDE CHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCHHH LLGQKVISVVNFPAKRVAGFKSEVLVLAAVTRDKGTVLLKPDFDVEIGSKVL HHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435734; 9384377 [H]