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The map label for this gene is rbsC [H]

Identifier: 157372164

GI number: 157372164

Start: 4354253

End: 4355335

Strand: Direct

Name: rbsC [H]

Synonym: Spro_3930

Alternate gene names: 157372164

Gene position: 4354253-4355335 (Clockwise)

Preceding gene: 157372163

Following gene: 157372165

Centisome position: 79.91

GC content: 59.56

Gene sequence:

>1083_bases
ATGTCTAAAACATCTGTTAAATCAACGGCACTGGAACAAAGAGTCAGCCTGTCGCAGGACGGCGCCGGCCCGTGGCTGAT
GCAGGTCCTTACCCGCTACGGCCTGCTGTTGCTGTGCATTGCGCTGGTGATCCTGTTTTCACTGATCTCCCCCACGTTCG
CCTCAATGCTGACGCTGCAGGCGATCCTCTCCAGCAAAGCAAAAATCGCCCTGTTGGCGCTGGCGGCGACCATCCCGATG
ATCGTCGGCAAAATTGACCTTAACGTCGGCTTCGGCATCGTGCTGTGGCATATCCTGGCCATTACCTTACAGGTGGAATA
CGGCTTTTCGTGGCAGATGGCGGTGCTGACGGTGCTGGCACTCTCCGCGCTGTACGGCCTGTTGAACGGTATTTTGGTGG
CGCTGGCGGATATCGACAGTTTCGTCGCCACCCTCGGTTCAGGCACCGTGCTGTATGCCATTGCGCTGTGGCACTCCGGC
GGACGACAGATCGTCGGCGATCTGCCGGACGCCTTTATCGCCCTGCACCACACCGAGATCGGCGGGATCCCGATCGTGGC
GTTCTACGTGTTGATCGTCGCGGTGGTGCTGTGGTTGATCACCGAACACACTCCGCTGGGCCGTTGTATGTATGCCGTTG
GCGGTAACCCGGCGGCGGCGCGGCTGAACGGCATTTCGGTCAATCGCTTTACCATCGGTGCCTTTATCGCCTCCAGCGTG
CTGACCGGCTTTAGCGGGGTGCTGATCGCCGCCGAGCAGGGTGTTGGCCAGGCCAGCGTCGGCATGGACTATCTATTGCC
CGCGCTGGTGGGCGCCTTCCTCGGCAGTACCACCATTCGTCCCGGTCGGGTTAACGTCTGGGGCACCGTAGTCGGCATCG
CCATTCTGGCTATCGGCATCGCCGGTATCCAGCAGTTCGGCGGCGAGTTCTGGGTCGAACCGCTGTTTAACGGTGCGACG
CTGTTGCTGTCAATCACGCTGGCAGGCTACGCCCAACGCCGTCGGCTACTCAATCAAAAAGCGGTTCAACGCAGCCCAGC
CATTCCGGCTGATAAAAATAACCATAAAGCGATCAATCCTTAA

Upstream 100 bases:

>100_bases
GAGCTGAAAAATCAGCAGGTGTCATTCGCCAATTTATTGGAACTGGCCTCCGCCAGCGCCGGGGAAACTCTCGAGACAAG
ATTAGAATCTGAGGTGGGTC

Downstream 100 bases:

>100_bases
CCAGGAGTTCACCGAATGAAACATCTTTGGATATTGCCCACCACCCTGCTGCTGGCCGGCGCCTCATCATCCGCCTGGGC
CGATGCCTATCTCGACCAGG

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSKTSVKSTALEQRVSLSQDGAGPWLMQVLTRYGLLLLCIALVILFSLISPTFASMLTLQAILSSKAKIALLALAATIPM
IVGKIDLNVGFGIVLWHILAITLQVEYGFSWQMAVLTVLALSALYGLLNGILVALADIDSFVATLGSGTVLYAIALWHSG
GRQIVGDLPDAFIALHHTEIGGIPIVAFYVLIVAVVLWLITEHTPLGRCMYAVGGNPAAARLNGISVNRFTIGAFIASSV
LTGFSGVLIAAEQGVGQASVGMDYLLPALVGAFLGSTTIRPGRVNVWGTVVGIAILAIGIAGIQQFGGEFWVEPLFNGAT
LLLSITLAGYAQRRRLLNQKAVQRSPAIPADKNNHKAINP

Sequences:

>Translated_360_residues
MSKTSVKSTALEQRVSLSQDGAGPWLMQVLTRYGLLLLCIALVILFSLISPTFASMLTLQAILSSKAKIALLALAATIPM
IVGKIDLNVGFGIVLWHILAITLQVEYGFSWQMAVLTVLALSALYGLLNGILVALADIDSFVATLGSGTVLYAIALWHSG
GRQIVGDLPDAFIALHHTEIGGIPIVAFYVLIVAVVLWLITEHTPLGRCMYAVGGNPAAARLNGISVNRFTIGAFIASSV
LTGFSGVLIAAEQGVGQASVGMDYLLPALVGAFLGSTTIRPGRVNVWGTVVGIAILAIGIAGIQQFGGEFWVEPLFNGAT
LLLSITLAGYAQRRRLLNQKAVQRSPAIPADKNNHKAINP
>Mature_359_residues
SKTSVKSTALEQRVSLSQDGAGPWLMQVLTRYGLLLLCIALVILFSLISPTFASMLTLQAILSSKAKIALLALAATIPMI
VGKIDLNVGFGIVLWHILAITLQVEYGFSWQMAVLTVLALSALYGLLNGILVALADIDSFVATLGSGTVLYAIALWHSGG
RQIVGDLPDAFIALHHTEIGGIPIVAFYVLIVAVVLWLITEHTPLGRCMYAVGGNPAAARLNGISVNRFTIGAFIASSVL
TGFSGVLIAAEQGVGQASVGMDYLLPALVGAFLGSTTIRPGRVNVWGTVVGIAILAIGIAGIQQFGGEFWVEPLFNGATL
LLSITLAGYAQRRRLLNQKAVQRSPAIPADKNNHKAINP

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788896, Length=293, Percent_Identity=31.3993174061433, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1790524, Length=291, Percent_Identity=27.4914089347079, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1790191, Length=323, Percent_Identity=29.1021671826625, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787794, Length=326, Percent_Identity=27.3006134969325, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788471, Length=166, Percent_Identity=29.5180722891566, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI145693152, Length=308, Percent_Identity=23.7012987012987, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082395, Length=248, Percent_Identity=28.6290322580645, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787793, Length=214, Percent_Identity=31.3084112149533, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI145693214, Length=236, Percent_Identity=28.3898305084746, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=31.3868613138686, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37951; Mature: 37820

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTSVKSTALEQRVSLSQDGAGPWLMQVLTRYGLLLLCIALVILFSLISPTFASMLTLQ
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILSSKAKIALLALAATIPMIVGKIDLNVGFGIVLWHILAITLQVEYGFSWQMAVLTVLA
HHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
LSALYGLLNGILVALADIDSFVATLGSGTVLYAIALWHSGGRQIVGDLPDAFIALHHTEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCCHHHHCCCHHHHEEECCCC
GGIPIVAFYVLIVAVVLWLITEHTPLGRCMYAVGGNPAAARLNGISVNRFTIGAFIASSV
CCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHEECCEEECHHHHHHHHHHHH
LTGFSGVLIAAEQGVGQASVGMDYLLPALVGAFLGSTTIRPGRVNVWGTVVGIAILAIGI
HHCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AGIQQFGGEFWVEPLFNGATLLLSITLAGYAQRRRLLNQKAVQRSPAIPADKNNHKAINP
HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKTSVKSTALEQRVSLSQDGAGPWLMQVLTRYGLLLLCIALVILFSLISPTFASMLTLQ
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILSSKAKIALLALAATIPMIVGKIDLNVGFGIVLWHILAITLQVEYGFSWQMAVLTVLA
HHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
LSALYGLLNGILVALADIDSFVATLGSGTVLYAIALWHSGGRQIVGDLPDAFIALHHTEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCCHHHHCCCHHHHEEECCCC
GGIPIVAFYVLIVAVVLWLITEHTPLGRCMYAVGGNPAAARLNGISVNRFTIGAFIASSV
CCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHEECCEEECHHHHHHHHHHHH
LTGFSGVLIAAEQGVGQASVGMDYLLPALVGAFLGSTTIRPGRVNVWGTVVGIAILAIGI
HHCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AGIQQFGGEFWVEPLFNGATLLLSITLAGYAQRRRLLNQKAVQRSPAIPADKNNHKAINP
HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]