| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372107
Identifier: 157372107
GI number: 157372107
Start: 4285543
End: 4286406
Strand: Direct
Name: 157372107
Synonym: Spro_3872
Alternate gene names: NA
Gene position: 4285543-4286406 (Clockwise)
Preceding gene: 157372106
Following gene: 157372108
Centisome position: 78.65
GC content: 46.18
Gene sequence:
>864_bases ATGGACACAGCAAGCATACATGACATAAAAATCTCTCTTCGATACGATGGGCTTGACGCAGAAAACCATGAAATTGATCT TGCCTGCTTAGGCGAGTCATTAAAGGGATTCTCGAAAATTCTGGCAACTGCCGGAAACTTTGCGGTGACACAGAGGTATA GCAAAAACGTTGCAGGACAGGATGTCAAAGTGTACGCAAAGGAAGCAAGGGCCAATTGCTTCACGCTTGATGCGGTTCTG AATTTCGTAGGGCAATCTCAATTGTTCTCTGGCGCCGTGGGTTCTATACTGGGGGCGTTGATACCTTACATTTTTAGCCG GAACTCACAGAAAAAAGAAGAAATGAAACTGCTTAAAGACTCTCTCGACAAAGCGATAGAGGCTCTTGGCAACAAAGATA GAGCAACTATCGAAGGACTACTTGCCGTCATCGACAAGATGGCTGGAGAGTTGCGTCCGTCTGTTAGGCAAGCGGTTTCA CCAATAGGGAACACCTGCAGGGAAATTAGCGTTACAACTAACTGCGGCCATGACCCTGCCAGGATAGATGAAGAAGACAA GGCAGTGATCGACCGCCTAAATGATGATGAAGTTATCGGGTTACGCGAATACAAGGTATTCATAACTGAGTTCGATGCGC AAAGAACCACGGCGAAGGTTATTCTGCTCGATGACGACAGTGGTAGGCGAGTGCCGGCAGAGATTAACGATCCATCAGTT AGGAAGGCTGGCAACCCATACATTACAGCTCTGAACGCTTACCTTGAATCTCAGGGTGCAGGCAGTGCATGCATAACGGT TACAGCAAAAGCATCTGTTAAAAAAGGTAATATTAGCAAACTCTATATTGCTGATGCCTCATAA
Upstream 100 bases:
>100_bases CGTATCACGTACCTGTTAATAAAACCAGATTAACCCCTTAAAGTAGTTAATGTATTATCTGTAATATTTATATTTCCCGG CTTTGCCAAAGGCTTAAACC
Downstream 100 bases:
>100_bases AACAAGCCCGCTATGCGGGTTTTTTTGTTGCAAATTGCATTATTTAAGGATGAATTAATGACCACAACAATTACTCTTGA TAATACATTAATAGCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MDTASIHDIKISLRYDGLDAENHEIDLACLGESLKGFSKILATAGNFAVTQRYSKNVAGQDVKVYAKEARANCFTLDAVL NFVGQSQLFSGAVGSILGALIPYIFSRNSQKKEEMKLLKDSLDKAIEALGNKDRATIEGLLAVIDKMAGELRPSVRQAVS PIGNTCREISVTTNCGHDPARIDEEDKAVIDRLNDDEVIGLREYKVFITEFDAQRTTAKVILLDDDSGRRVPAEINDPSV RKAGNPYITALNAYLESQGAGSACITVTAKASVKKGNISKLYIADAS
Sequences:
>Translated_287_residues MDTASIHDIKISLRYDGLDAENHEIDLACLGESLKGFSKILATAGNFAVTQRYSKNVAGQDVKVYAKEARANCFTLDAVL NFVGQSQLFSGAVGSILGALIPYIFSRNSQKKEEMKLLKDSLDKAIEALGNKDRATIEGLLAVIDKMAGELRPSVRQAVS PIGNTCREISVTTNCGHDPARIDEEDKAVIDRLNDDEVIGLREYKVFITEFDAQRTTAKVILLDDDSGRRVPAEINDPSV RKAGNPYITALNAYLESQGAGSACITVTAKASVKKGNISKLYIADAS >Mature_287_residues MDTASIHDIKISLRYDGLDAENHEIDLACLGESLKGFSKILATAGNFAVTQRYSKNVAGQDVKVYAKEARANCFTLDAVL NFVGQSQLFSGAVGSILGALIPYIFSRNSQKKEEMKLLKDSLDKAIEALGNKDRATIEGLLAVIDKMAGELRPSVRQAVS PIGNTCREISVTTNCGHDPARIDEEDKAVIDRLNDDEVIGLREYKVFITEFDAQRTTAKVILLDDDSGRRVPAEINDPSV RKAGNPYITALNAYLESQGAGSACITVTAKASVKKGNISKLYIADAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31047; Mature: 31047
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTASIHDIKISLRYDGLDAENHEIDLACLGESLKGFSKILATAGNFAVTQRYSKNVAGQ CCCCCEEEEEEEEEECCCCCCCCEEEHEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC DVKVYAKEARANCFTLDAVLNFVGQSQLFSGAVGSILGALIPYIFSRNSQKKEEMKLLKD CCEEEEHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLDKAIEALGNKDRATIEGLLAVIDKMAGELRPSVRQAVSPIGNTCREISVTTNCGHDPA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEEEEECCCCCCCC RIDEEDKAVIDRLNDDEVIGLREYKVFITEFDAQRTTAKVILLDDDSGRRVPAEINDPSV CCCCHHHHHHHCCCCCCEEEHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC RKAGNPYITALNAYLESQGAGSACITVTAKASVKKGNISKLYIADAS HHCCCCEEEHHHHHHHCCCCCCEEEEEEEECEECCCCCEEEEEEECC >Mature Secondary Structure MDTASIHDIKISLRYDGLDAENHEIDLACLGESLKGFSKILATAGNFAVTQRYSKNVAGQ CCCCCEEEEEEEEEECCCCCCCCEEEHEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC DVKVYAKEARANCFTLDAVLNFVGQSQLFSGAVGSILGALIPYIFSRNSQKKEEMKLLKD CCEEEEHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLDKAIEALGNKDRATIEGLLAVIDKMAGELRPSVRQAVSPIGNTCREISVTTNCGHDPA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEEEEECCCCCCCC RIDEEDKAVIDRLNDDEVIGLREYKVFITEFDAQRTTAKVILLDDDSGRRVPAEINDPSV CCCCHHHHHHHCCCCCCEEEHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC RKAGNPYITALNAYLESQGAGSACITVTAKASVKKGNISKLYIADAS HHCCCCEEEHHHHHHHCCCCCCEEEEEEEECEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA