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The map label for this gene is ygdQ [H]

Identifier: 157372061

GI number: 157372061

Start: 4234149

End: 4234865

Strand: Direct

Name: ygdQ [H]

Synonym: Spro_3826

Alternate gene names: 157372061

Gene position: 4234149-4234865 (Clockwise)

Preceding gene: 157372060

Following gene: 157372062

Centisome position: 77.71

GC content: 53.28

Gene sequence:

>717_bases
ATGTTTGAGTGGATTATGGATCCCAATGCCTGGTTAGCGTTAGGTACGCTGACCATTCTTGAGATCATTCTGGGTATTGA
TAACATTATTTTCCTTTCGCTGGTGGTGTCCAAGCTGCCGAAAGCGCAGCAGAACAAGGCTCGCCGCATCGGGCTGGCCG
GCGCAATGTTAATGCGTCTGGGGCTGTTGGCCTCCATCGCCTGGGTGATCCGTCTGACCCATCCGCTGTTTAGCGTCATG
GACCACAGCATCTCGGCACGCGATCTGATCCTGCTGCTGGGTGGGCTGTTCCTGATTTGGAAAGCCAGTAAAGAGATCCA
TGAAACCATCGAAGGCTCTGATGAAGAGCACCACACCAAGGTGCACGGCTTCTTCGGCGCCATCGTGCAGATTATGCTGC
TGGACATCATTTTCAGCCTGGACTCGGTGATTACCGCGGTAGGCCTGTCCGACCATCTGTTTATTATGATGGCCGCAGTG
GTGATTGCCGTTGGCGTCATGATGTTTGCCGCCCGACCTATTGGTGAGTTCGTTAACCGCCACCCTTCGGTGAAGATGCT
GGCGTTGGCGTTCCTGATCCTGGTGGGCTTCACCCTGATGCTGGAAAGCTTCCAGGTACATGTACCGAAAGGCTACATCT
ACTTTGCGATGTTCTTCTCAATGTCGGTCGAAGCGCTCAACCTGATGCGCAGCAAGAAAAAAACCGTCTCTGAGTAA

Upstream 100 bases:

>100_bases
TCTGATCCCTTTTGTTTAGGTCGCGTTTAGCTAACAGTGTCGTTGTATCAATAAACGCGTATAATTCAGCCTTTGTTTTT
TATTAAGGTGTGGCTCGACA

Downstream 100 bases:

>100_bases
TTCCCCACGGGAGTGCGCGTCAGCCACTCCCGTTATTATTTTCTGCTGCCCTGTTTCAGCGTCACTTTCCCTATCAAGAT
AAAGACTTATCCGAAACACG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFEWIMDPNAWLALGTLTILEIILGIDNIIFLSLVVSKLPKAQQNKARRIGLAGAMLMRLGLLASIAWVIRLTHPLFSVM
DHSISARDLILLLGGLFLIWKASKEIHETIEGSDEEHHTKVHGFFGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAV
VIAVGVMMFAARPIGEFVNRHPSVKMLALAFLILVGFTLMLESFQVHVPKGYIYFAMFFSMSVEALNLMRSKKKTVSE

Sequences:

>Translated_238_residues
MFEWIMDPNAWLALGTLTILEIILGIDNIIFLSLVVSKLPKAQQNKARRIGLAGAMLMRLGLLASIAWVIRLTHPLFSVM
DHSISARDLILLLGGLFLIWKASKEIHETIEGSDEEHHTKVHGFFGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAV
VIAVGVMMFAARPIGEFVNRHPSVKMLALAFLILVGFTLMLESFQVHVPKGYIYFAMFFSMSVEALNLMRSKKKTVSE
>Mature_238_residues
MFEWIMDPNAWLALGTLTILEIILGIDNIIFLSLVVSKLPKAQQNKARRIGLAGAMLMRLGLLASIAWVIRLTHPLFSVM
DHSISARDLILLLGGLFLIWKASKEIHETIEGSDEEHHTKVHGFFGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAV
VIAVGVMMFAARPIGEFVNRHPSVKMLALAFLILVGFTLMLESFQVHVPKGYIYFAMFFSMSVEALNLMRSKKKTVSE

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=81.1965811965812, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1788119, Length=233, Percent_Identity=49.7854077253219, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI87082033, Length=227, Percent_Identity=52.863436123348, Blast_Score=234, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 26510; Mature: 26510

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWIMDPNAWLALGTLTILEIILGIDNIIFLSLVVSKLPKAQQNKARRIGLAGAMLMRL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLLASIAWVIRLTHPLFSVMDHSISARDLILLLGGLFLIWKASKEIHETIEGSDEEHHTK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VHGFFGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGEFVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HPSVKMLALAFLILVGFTLMLESFQVHVPKGYIYFAMFFSMSVEALNLMRSKKKTVSE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEWIMDPNAWLALGTLTILEIILGIDNIIFLSLVVSKLPKAQQNKARRIGLAGAMLMRL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GLLASIAWVIRLTHPLFSVMDHSISARDLILLLGGLFLIWKASKEIHETIEGSDEEHHTK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VHGFFGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGEFVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HPSVKMLALAFLILVGFTLMLESFQVHVPKGYIYFAMFFSMSVEALNLMRSKKKTVSE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]