Click here to switch to the map view.

The map label for this gene is ydfG [H]

Identifier: 157371955

GI number: 157371955

Start: 4109513

End: 4109944

Strand: Direct

Name: ydfG [H]

Synonym: Spro_3720

Alternate gene names: 157371955

Gene position: 4109513-4109944 (Clockwise)

Preceding gene: 157371953

Following gene: 157371956

Centisome position: 75.42

GC content: 56.02

Gene sequence:

>432_bases
ATGATTAAGCAACGTTTGAACTATTCCGCACTCTCCCCCGCACCGTACAAAAGCATGGTGAGCGCCCTGATGGCACTGGA
GAAAGGCGCGCTGGACAAAGCGACGATTGAACTGATGTTCATGCGTGTTTCGCAGATCAACGGCTGTGCCTTCTGCCTGG
ATATGCACGGCAAAACGCTACGCGAAAGCGGCGTCAATAACGCCAAACTGGACCAGTTGGCAGGCTGGCGCGTCAGCCAT
GAATTCAGTGAGCGCGAGCGTGCAGCACTGGAATGGGCAGAGTCCGTCACCCTGATCGCCACGACTGGCGCACCGGACAG
CGCGTTTGAAGCACTGCAGGCGCACTTCAGCGACGTGGAAATTGCCGATTTAACCTTCGCCATCAGCATCATGAATGCCT
TTAACCGCCTGGCTATCAGCATGCGTCAGTGA

Upstream 100 bases:

>100_bases
TTATGGCCCGGTTAAATAATCATTTTATGGCCCTATAGTATAGTCCATATCACCGCTAAAGTAGCGTCATGTTCCTGTTA
TTCGCACACCGAGGTTGACC

Downstream 100 bases:

>100_bases
TAAAACCGCACTTCCCCTCTCGCGGCGAGAGGGGTTTTCCGTCAATAACCCTCTGCAAAAAAAATTTACCCACCGCTGTT
CCAGCCCCGCTGCGCCCTGC

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIKQRLNYSALSPAPYKSMVSALMALEKGALDKATIELMFMRVSQINGCAFCLDMHGKTLRESGVNNAKLDQLAGWRVSH
EFSERERAALEWAESVTLIATTGAPDSAFEALQAHFSDVEIADLTFAISIMNAFNRLAISMRQ

Sequences:

>Translated_143_residues
MIKQRLNYSALSPAPYKSMVSALMALEKGALDKATIELMFMRVSQINGCAFCLDMHGKTLRESGVNNAKLDQLAGWRVSH
EFSERERAALEWAESVTLIATTGAPDSAFEALQAHFSDVEIADLTFAISIMNAFNRLAISMRQ
>Mature_143_residues
MIKQRLNYSALSPAPYKSMVSALMALEKGALDKATIELMFMRVSQINGCAFCLDMHGKTLRESGVNNAKLDQLAGWRVSH
EFSERERAALEWAESVTLIATTGAPDSAFEALQAHFSDVEIADLTFAISIMNAFNRLAISMRQ

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788050, Length=124, Percent_Identity=31.4516129032258, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 15802; Mature: 15802

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQRLNYSALSPAPYKSMVSALMALEKGALDKATIELMFMRVSQINGCAFCLDMHGKTL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHH
RESGVNNAKLDQLAGWRVSHEFSERERAALEWAESVTLIATTGAPDSAFEALQAHFSDVE
HHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCC
IADLTFAISIMNAFNRLAISMRQ
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKQRLNYSALSPAPYKSMVSALMALEKGALDKATIELMFMRVSQINGCAFCLDMHGKTL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHH
RESGVNNAKLDQLAGWRVSHEFSERERAALEWAESVTLIATTGAPDSAFEALQAHFSDVE
HHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCC
IADLTFAISIMNAFNRLAISMRQ
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]