| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yacH [H]
Identifier: 157371937
GI number: 157371937
Start: 4094834
End: 4096081
Strand: Direct
Name: yacH [H]
Synonym: Spro_3702
Alternate gene names: 157371937
Gene position: 4094834-4096081 (Clockwise)
Preceding gene: 157371936
Following gene: 157371939
Centisome position: 75.15
GC content: 61.7
Gene sequence:
>1248_bases ATGGCGCTGCTGGCGCTGAGTGGTTGCGACCGAGCGCAAGACCGCCCTGCACCGCCGTCTTCGTCATCTGCCACCGCGCC GGTACCACGGGTGCAAAATAGCGGCCTACCACAGAGTGCCACAAGCACTCAGCAGTTGTACTCACTGCTCGGCCCGATCG CCCTGTTCCCGGATAATTTGCTGGCACAGGTCCTGGCAGCCAGCACCACACCCGATCAGGTTACCGCCGCCAATGCCTGG CTGCTGCAAAACAAAAGCCTGACCGGCAGCGCACTGACGCAGGCAGTTAACGCGCAGCCCTGGGCGCCGGCGGTAAAAGC CATGGTGACCTTCCCCGACGTGCTGCAGCAAATGGCACAGAATCCGGGTTGGACTCAGGCTCTGGGCAGCGCTTATAGCC AAGATCCGAGCGACGTGATGAACGCCGTTCAGCTACTGCGTCAACGCGCCAGCAACAGTGGTGCGTTGAAAAGCAACGCA CAACAGCAAGTTATCGTTACCGCTAATAACGCGGCAGGCACGCCCGCGACTGCGGTCAATAAGACCACGGCTGCACCGAC CCAGACCATCGTCATCAAACCGGCTCAGCCAAGCGTGGTGTATGTGCCCAGCTACGGCACCGCCGTTTATGGCAATCCGC CAGTGGCCTACTATCCGGGCTATGCGCCACCACCGGCTTACAGCACCAGTGACATGGTGGCTACCGGGTTGATCAGCTTT ACCGCCGGGGTCATGGTCGGGTCGATGTTCGATAATAACTGGGGTGTGCACTGGGGCGGCAGCCCGGTAGTGGTATATAA CAACCGGACCTTTATCAGCAATAACGATTGGCATCACAACGGATATGGGCCACGCGCGCCCTTCAGCGAACCGCACTTCG CACCGGCACGCAGCAACTTTACCCCACGGCATGCCACGCCGCTGGATCATCAGGGTCTCCGTTCACCGACCTTCGACCCG CATCGCAATGCCGAGCGTTACGCAGGCCCAGTGCGTACCACGACACGCCAGCCGGAACGTCATGTCGAGCATGCCCTGCC CCAGCGCAGCAGCGGATTGCAATCCGAACGTCATCTGGCCCCCGGACCGGTGCGCTTGTCCTCCGTGCATCAGCCCCAGT TCCAACGTGAGCGGGATGTGCGTCCCTTCGGCGATGGCGCATCCCACCCGGCATTTTCCAGCGCGCTGAACCACTCGTGG GGGGATGGGCATCTCTTCGGCGGGAATAATCATCGCCGCCGGCTGTGA
Upstream 100 bases:
>100_bases CGCAGCCAGGTCGGCGCTTCCCCCCGAATGGCTCAAGAGATCCTCGGCTCAACAAGAGGAGCATCGCATGTTCAACATGA AAAAATTACCCTGGGTTCTG
Downstream 100 bases:
>100_bases TCGCACTCAGACAACAGTCCACAGCAGATGTCGGGCTTTTCACAATGTCCGCGTATACACTCGCGAAGCCTCACCCCAGG GGTGATAGCCCAGCCCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MALLALSGCDRAQDRPAPPSSSSATAPVPRVQNSGLPQSATSTQQLYSLLGPIALFPDNLLAQVLAASTTPDQVTAANAW LLQNKSLTGSALTQAVNAQPWAPAVKAMVTFPDVLQQMAQNPGWTQALGSAYSQDPSDVMNAVQLLRQRASNSGALKSNA QQQVIVTANNAAGTPATAVNKTTAAPTQTIVIKPAQPSVVYVPSYGTAVYGNPPVAYYPGYAPPPAYSTSDMVATGLISF TAGVMVGSMFDNNWGVHWGGSPVVVYNNRTFISNNDWHHNGYGPRAPFSEPHFAPARSNFTPRHATPLDHQGLRSPTFDP HRNAERYAGPVRTTTRQPERHVEHALPQRSSGLQSERHLAPGPVRLSSVHQPQFQRERDVRPFGDGASHPAFSSALNHSW GDGHLFGGNNHRRRL
Sequences:
>Translated_415_residues MALLALSGCDRAQDRPAPPSSSSATAPVPRVQNSGLPQSATSTQQLYSLLGPIALFPDNLLAQVLAASTTPDQVTAANAW LLQNKSLTGSALTQAVNAQPWAPAVKAMVTFPDVLQQMAQNPGWTQALGSAYSQDPSDVMNAVQLLRQRASNSGALKSNA QQQVIVTANNAAGTPATAVNKTTAAPTQTIVIKPAQPSVVYVPSYGTAVYGNPPVAYYPGYAPPPAYSTSDMVATGLISF TAGVMVGSMFDNNWGVHWGGSPVVVYNNRTFISNNDWHHNGYGPRAPFSEPHFAPARSNFTPRHATPLDHQGLRSPTFDP HRNAERYAGPVRTTTRQPERHVEHALPQRSSGLQSERHLAPGPVRLSSVHQPQFQRERDVRPFGDGASHPAFSSALNHSW GDGHLFGGNNHRRRL >Mature_414_residues ALLALSGCDRAQDRPAPPSSSSATAPVPRVQNSGLPQSATSTQQLYSLLGPIALFPDNLLAQVLAASTTPDQVTAANAWL LQNKSLTGSALTQAVNAQPWAPAVKAMVTFPDVLQQMAQNPGWTQALGSAYSQDPSDVMNAVQLLRQRASNSGALKSNAQ QQVIVTANNAAGTPATAVNKTTAAPTQTIVIKPAQPSVVYVPSYGTAVYGNPPVAYYPGYAPPPAYSTSDMVATGLISFT AGVMVGSMFDNNWGVHWGGSPVVVYNNRTFISNNDWHHNGYGPRAPFSEPHFAPARSNFTPRHATPLDHQGLRSPTFDPH RNAERYAGPVRTTTRQPERHVEHALPQRSSGLQSERHLAPGPVRLSSVHQPQFQRERDVRPFGDGASHPAFSSALNHSWG DGHLFGGNNHRRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=204, Percent_Identity=44.6078431372549, Blast_Score=149, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 44447; Mature: 44316
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLALSGCDRAQDRPAPPSSSSATAPVPRVQNSGLPQSATSTQQLYSLLGPIALFPDNL CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHH LAQVLAASTTPDQVTAANAWLLQNKSLTGSALTQAVNAQPWAPAVKAMVTFPDVLQQMAQ HHHHHHCCCCCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC NPGWTQALGSAYSQDPSDVMNAVQLLRQRASNSGALKSNAQQQVIVTANNAAGTPATAVN CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHCC KTTAAPTQTIVIKPAQPSVVYVPSYGTAVYGNPPVAYYPGYAPPPAYSTSDMVATGLISF CCCCCCCEEEEEECCCCCEEEECCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHH TAGVMVGSMFDNNWGVHWGGSPVVVYNNRTFISNNDWHHNGYGPRAPFSEPHFAPARSNF HHHHHHHHHHCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TPRHATPLDHQGLRSPTFDPHRNAERYAGPVRTTTRQPERHVEHALPQRSSGLQSERHLA CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCHHCCCC PGPVRLSSVHQPQFQRERDVRPFGDGASHPAFSSALNHSWGDGHLFGGNNHRRRL CCCEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCC >Mature Secondary Structure ALLALSGCDRAQDRPAPPSSSSATAPVPRVQNSGLPQSATSTQQLYSLLGPIALFPDNL EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHH LAQVLAASTTPDQVTAANAWLLQNKSLTGSALTQAVNAQPWAPAVKAMVTFPDVLQQMAQ HHHHHHCCCCCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC NPGWTQALGSAYSQDPSDVMNAVQLLRQRASNSGALKSNAQQQVIVTANNAAGTPATAVN CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHCC KTTAAPTQTIVIKPAQPSVVYVPSYGTAVYGNPPVAYYPGYAPPPAYSTSDMVATGLISF CCCCCCCEEEEEECCCCCEEEECCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHH TAGVMVGSMFDNNWGVHWGGSPVVVYNNRTFISNNDWHHNGYGPRAPFSEPHFAPARSNF HHHHHHHHHHCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TPRHATPLDHQGLRSPTFDPHRNAERYAGPVRTTTRQPERHVEHALPQRSSGLQSERHLA CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCHHCCCC PGPVRLSSVHQPQFQRERDVRPFGDGASHPAFSSALNHSWGDGHLFGGNNHRRRL CCCEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]