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The map label for this gene is iscR [H]

Identifier: 157371863

GI number: 157371863

Start: 4013027

End: 4013521

Strand: Reverse

Name: iscR [H]

Synonym: Spro_3628

Alternate gene names: 157371863

Gene position: 4013521-4013027 (Counterclockwise)

Preceding gene: 157371864

Following gene: 157371862

Centisome position: 73.66

GC content: 56.77

Gene sequence:

>495_bases
ATGAGACTGACATCCAAAGGCCGTTATGCCGTAACCGCTATGCTTGACGTGGCATTGCACTCCCAGGAAGGGCCCGTTCC
TCTGGCGGATATTTCTGAGCGCCAGGGTATCTCGCTCTCTTATCTGGAACAATTATTCTCCCGTCTGCGCAAGAATGGCC
TGGTGGCCAGCGTACGTGGACCGGGCGGTGGTTATCTGCTGGGCAAAGACGCGAGTGAGATTGCCGTAGGTGCAGTCATC
ACTGCTGTCGATGAATCGGTAGACGCAACCCGTTGCCAGGGTAAAGAAGGCTGTCAGGGTGGCGATCGCTGCCTGACCCA
TACCCTGTGGCGCGATCTGAGCGAGCGCATCAGCGGGTTCCTGAACAACATTACGCTGGCTGAACTGGTGAACAACCAGG
ACGTGCTGGTGGTGGCGGACCGTCAAAACAACGATACCCGTCGCACGGCCAACGGTCGTCCGCAAGAAACTATCAACGTT
AATCTGCGCGCATAA

Upstream 100 bases:

>100_bases
GTGCTAATACTTGAGTAAATTACTAGGTTAAATAGTTGACTGATTTACTCAGGAATGTCAGACTTTCGGCCATGTTTGAC
CAACAGGTAACCACTTAGCT

Downstream 100 bases:

>100_bases
GCAGCTGGCGATATTTTTTTAGTTTTTGGAAGTGATGTACGGAGCACAAGAGCAATGAAATTACCGATTTATCTGGATTA
CTCAGCAACGACGCCGGTTG

Product: DNA-binding transcriptional regulator IscR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKDASEIAVGAVI
TAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGFLNNITLAELVNNQDVLVVADRQNNDTRRTANGRPQETINV
NLRA

Sequences:

>Translated_164_residues
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKDASEIAVGAVI
TAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGFLNNITLAELVNNQDVLVVADRQNNDTRRTANGRPQETINV
NLRA
>Mature_164_residues
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKDASEIAVGAVI
TAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGFLNNITLAELVNNQDVLVVADRQNNDTRRTANGRPQETINV
NLRA

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=165, Percent_Identity=81.2121212121212, Blast_Score=236, Evalue=4e-64,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17764; Mature: 17764

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRG
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PGGGYLLGKDASEIAVGAVITAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGF
CCCCEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNNITLAELVNNQDVLVVADRQNNDTRRTANGRPQETINVNLRA
HHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRG
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PGGGYLLGKDASEIAVGAVITAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGF
CCCCEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNNITLAELVNNQDVLVVADRQNNDTRRTANGRPQETINVNLRA
HHCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA