| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yegQ [H]
Identifier: 157371796
GI number: 157371796
Start: 3936797
End: 3938149
Strand: Direct
Name: yegQ [H]
Synonym: Spro_3561
Alternate gene names: 157371796
Gene position: 3936797-3938149 (Clockwise)
Preceding gene: 157371795
Following gene: 157371797
Centisome position: 72.25
GC content: 56.47
Gene sequence:
>1353_bases ATGTTTACACCGGAACTCCTCTCCCCCGCGGGGACGCTGAAAAACATGCGTTACGCCTTTGCCTATGGTGCGGACGCCGT TTATGCCGGCCAACCGCGTTACAGCCTGCGGGTGCGCAATAACGAATTCAATCACGAGAATCTGGCACAGGGGATTAACG AAGCCCACGCGCTGGGCAAAAGATTCTACGTGGTGGTGAATATCGCCCCGCACAACGCCAAGCTGAAAACCTTCCTGCGC GATCTTAAACCGGTGATCGACATGGGCCCGGACGCGCTGATCATGTCCGATCCAGGCCTGATCATGATGGTGCGCGAAGC CTTCCCGCAGATGGACATTCATTTGTCGGTACAGGCGAACGCGGTTAACTGGGCGACGGTGAAATTCTGGCAGCAAATGG GGCTGACGCGAGTGATCCTGTCGCGCGAGCTGTCGCTGGAGGAGATCGCCGAGATCCGCACCCAGGTACCGGAAATGGAG CTGGAAATCTTCGTCCACGGTGCCCTGTGCATGGCCTACTCCGGCCGCTGCCTGTTGTCCGGTTATATCAACAAGCGCGA CCCCAATCAGGGCACCTGCACCAACGCCTGCCGCTGGCAGTACAAAGCGGAAGAAGGCAAAGAGGACGAGACCGGTAACA TCGTGCATATGCATGAGCCGATCCCGGTACAGACCATCGAGCCGACGCTGGGCATCGGTGCGCCGACCGATAAAGTGTTT ATGCTGTCCGAAGCGCAAAAACCGGATGAGTACATGAGCGCCTTTGAGGATGAACACGGCACCTACATCATGAACTCGAA GGATTTACGTGCCATCCAGCATGTGGAACGCCTGACTCAGCTCGGAGTGCATTCGCTGAAAATCGAAGGCCGCACCAAAT CCTTCTACTACTGTGCGCGCACCGCACAAGTCTATCGCCGCGCCATCGACGACGCCGTCGCGGGCAAACCATTCGATCCC ACCCTGCTCACCACGCTGGAAGGTCTGGCCCACCGGGGTTACACCGAAGGTTTCCTGCGTCGCCATGTGCACGAAGCCCA GCAAAACTACGATTACGGTTCCTCACTGTCTGAACGCCAGCAGTTTGTCGGTGAATTCACCGGCGTCCGCCGTGACGGTT GGGCAGAAGTGGATGTGAAAAACAAGTTCATGGTCGGCGATAGTGTCGAGATGATGACTCCCGGCGGTAACGTATTGTTT ACCCTGGAGAGCATGCAAAATAAGAAAGGTGAAGCGATCGACGTGGCACCGGGCAACGGGCATATCGTTTATTTACCCAT TCCGTCAGATATCGATCTCAATTACGCATTGCTGATCCGAAATTTGCCGGAGACCAATAGCCCTGCGGTGTGA
Upstream 100 bases:
>100_bases GTTACCTGCTGATTTCTTGCCGCTCTGTCGCTACAATCCCCCGCTTTTACTGCGCCATTTGGTGGTGCAGTACTGACCTG AAATCAGACCGAGACTCATT
Downstream 100 bases:
>100_bases AAATTCCGCCCGCTATCTTTTAATGCTGGTTTTTGGCAAATATTAGAATTAGATCACATCAATTAGTGCGCAGCTTGGTT AACATCAGGCTGCTTAAAAC
Product: peptidase U32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGKRFYVVVNIAPHNAKLKTFLR DLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRTQVPEME LEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWQYKAEEGKEDETGNIVHMHEPIPVQTIEPTLGIGAPTDKVF MLSEAQKPDEYMSAFEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCARTAQVYRRAIDDAVAGKPFDP TLLTTLEGLAHRGYTEGFLRRHVHEAQQNYDYGSSLSERQQFVGEFTGVRRDGWAEVDVKNKFMVGDSVEMMTPGGNVLF TLESMQNKKGEAIDVAPGNGHIVYLPIPSDIDLNYALLIRNLPETNSPAV
Sequences:
>Translated_450_residues MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGKRFYVVVNIAPHNAKLKTFLR DLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRTQVPEME LEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWQYKAEEGKEDETGNIVHMHEPIPVQTIEPTLGIGAPTDKVF MLSEAQKPDEYMSAFEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCARTAQVYRRAIDDAVAGKPFDP TLLTTLEGLAHRGYTEGFLRRHVHEAQQNYDYGSSLSERQQFVGEFTGVRRDGWAEVDVKNKFMVGDSVEMMTPGGNVLF TLESMQNKKGEAIDVAPGNGHIVYLPIPSDIDLNYALLIRNLPETNSPAV >Mature_450_residues MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGKRFYVVVNIAPHNAKLKTFLR DLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIAEIRTQVPEME LEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWQYKAEEGKEDETGNIVHMHEPIPVQTIEPTLGIGAPTDKVF MLSEAQKPDEYMSAFEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCARTAQVYRRAIDDAVAGKPFDP TLLTTLEGLAHRGYTEGFLRRHVHEAQQNYDYGSSLSERQQFVGEFTGVRRDGWAEVDVKNKFMVGDSVEMMTPGGNVLF TLESMQNKKGEAIDVAPGNGHIVYLPIPSDIDLNYALLIRNLPETNSPAV
Specific function: Unknown
COG id: COG0826
COG function: function code O; Collagenase and related proteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U32 family [H]
Homologues:
Organism=Escherichia coli, GI1788397, Length=442, Percent_Identity=83.0316742081448, Blast_Score=770, Evalue=0.0, Organism=Escherichia coli, GI87081910, Length=345, Percent_Identity=28.4057971014493, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1789548, Length=321, Percent_Identity=28.6604361370716, Blast_Score=125, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001539 [H]
Pfam domain/function: PF01136 Peptidase_U32 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 50593; Mature: 50593
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS01276 PEPTIDASE_U32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGK CCCCHHCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCC RFYVVVNIAPHNAKLKTFLRDLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQAN EEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHCCCCEEEEEEEEC AVNWATVKFWQQMGLTRVILSRELSLEEIAEIRTQVPEMELEIFVHGALCMAYSGRCLLS CCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEEEEHCCCCEEEE GYINKRDPNQGTCTNACRWQYKAEEGKEDETGNIVHMHEPIPVQTIEPTLGIGAPTDKVF ECCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCEE MLSEAQKPDEYMSAFEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCAR EEECCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHH TAQVYRRAIDDAVAGKPFDPTLLTTLEGLAHRGYTEGFLRRHVHEAQQNYDYGSSLSERQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH QFVGEFTGVRRDGWAEVDVKNKFMVGDSVEMMTPGGNVLFTLESMQNKKGEAIDVAPGNG HHHHHHHCCCCCCCEEEECCCEEEECCCEEEECCCCCEEEEEEHHCCCCCCEEEECCCCC HIVYLPIPSDIDLNYALLIRNLPETNSPAV EEEEEECCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGK CCCCHHCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCC RFYVVVNIAPHNAKLKTFLRDLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQAN EEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHCCCCEEEEEEEEC AVNWATVKFWQQMGLTRVILSRELSLEEIAEIRTQVPEMELEIFVHGALCMAYSGRCLLS CCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEEEEHCCCCEEEE GYINKRDPNQGTCTNACRWQYKAEEGKEDETGNIVHMHEPIPVQTIEPTLGIGAPTDKVF ECCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCEE MLSEAQKPDEYMSAFEDEHGTYIMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSFYYCAR EEECCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHH TAQVYRRAIDDAVAGKPFDPTLLTTLEGLAHRGYTEGFLRRHVHEAQQNYDYGSSLSERQ HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH QFVGEFTGVRRDGWAEVDVKNKFMVGDSVEMMTPGGNVLFTLESMQNKKGEAIDVAPGNG HHHHHHHCCCCCCCEEEECCCEEEECCCEEEECCCCCEEEEEEHHCCCCCCEEEECCCCC HIVYLPIPSDIDLNYALLIRNLPETNSPAV EEEEEECCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]