| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371734
Identifier: 157371734
GI number: 157371734
Start: 3874927
End: 3875409
Strand: Direct
Name: 157371734
Synonym: Spro_3497
Alternate gene names: NA
Gene position: 3874927-3875409 (Clockwise)
Preceding gene: 157371733
Following gene: 157371735
Centisome position: 71.11
GC content: 59.63
Gene sequence:
>483_bases ATGATGTCTCCTACGCTGACCATCGAACAATTGAAAGAGTTGGGCCGCTATCAGGAAGCGACCGAACTGGCGCAACAACA GTTACTGCAACAACCGGAAGCCGCCGGGCTGCACTACCAATTGGCTTGCCTGTACGACGTTCAGGGGTTTGAGCAGCAGG CCATTCCCTGCTACCTCGCGGCACTGGCGCGCAATTTGCCGGCGACGCAGCGGCAGGAAGCCTGGCTTGGCCTGGGTAGT ACCTACCGGGCGCTAGGCCTGTACCAGCAGTCGCTGGCCGCCTTCGACGACGGGTTGAGCGAGTTCCCGCAGGCCAAAGA GCTCACGCTGTTCCGCGCCATGACGCTGTACAACCTGGGCGAAACCAAACAGGCGGTAGCGGATTTGCTGTTACTGCTGG CGGAAACTTCCTCGCATAGCGACATCAGCAGTTACCAGCGTGCGATCCGTCAATACGCCGCCGATCTGGATCGGATTGGC TAA
Upstream 100 bases:
>100_bases ACGGGGCCAACCTTCCCTCTGTAATGCCTTAGCCCTTGTGCGATGAATTCTTCCGTAGTAGCGTGCAAAAGATACAAAAA CCTTACTCACCCAAGGCCAT
Downstream 100 bases:
>100_bases GCGAGGCTGATATGGAAATAGTGACTGACCCGAAGCGCTACGACGTCGACTGGCTGCAGTTGGCCGGGCTACTGGAAACC GCCGGATTGGGCCAGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Domain-Containing Protein; TPR Repeat Protein; Tetratricopeptide Tpr_2 Repeat Protein; Chloramphenicol Acetyltransferase
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MMSPTLTIEQLKELGRYQEATELAQQQLLQQPEAAGLHYQLACLYDVQGFEQQAIPCYLAALARNLPATQRQEAWLGLGS TYRALGLYQQSLAAFDDGLSEFPQAKELTLFRAMTLYNLGETKQAVADLLLLLAETSSHSDISSYQRAIRQYAADLDRIG
Sequences:
>Translated_160_residues MMSPTLTIEQLKELGRYQEATELAQQQLLQQPEAAGLHYQLACLYDVQGFEQQAIPCYLAALARNLPATQRQEAWLGLGS TYRALGLYQQSLAAFDDGLSEFPQAKELTLFRAMTLYNLGETKQAVADLLLLLAETSSHSDISSYQRAIRQYAADLDRIG >Mature_160_residues MMSPTLTIEQLKELGRYQEATELAQQQLLQQPEAAGLHYQLACLYDVQGFEQQAIPCYLAALARNLPATQRQEAWLGLGS TYRALGLYQQSLAAFDDGLSEFPQAKELTLFRAMTLYNLGETKQAVADLLLLLAETSSHSDISSYQRAIRQYAADLDRIG
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17847; Mature: 17847
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPTLTIEQLKELGRYQEATELAQQQLLQQPEAAGLHYQLACLYDVQGFEQQAIPCYLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH ALARNLPATQRQEAWLGLGSTYRALGLYQQSLAAFDDGLSEFPQAKELTLFRAMTLYNLG HHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC ETKQAVADLLLLLAETSSHSDISSYQRAIRQYAADLDRIG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSPTLTIEQLKELGRYQEATELAQQQLLQQPEAAGLHYQLACLYDVQGFEQQAIPCYLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH ALARNLPATQRQEAWLGLGSTYRALGLYQQSLAAFDDGLSEFPQAKELTLFRAMTLYNLG HHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC ETKQAVADLLLLLAETSSHSDISSYQRAIRQYAADLDRIG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA