| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yghZ [H]
Identifier: 157371650
GI number: 157371650
Start: 3774704
End: 3775693
Strand: Direct
Name: yghZ [H]
Synonym: Spro_3413
Alternate gene names: 157371650
Gene position: 3774704-3775693 (Clockwise)
Preceding gene: 157371648
Following gene: 157371651
Centisome position: 69.28
GC content: 57.58
Gene sequence:
>990_bases ATGCTCTACCAGGCTGATTCTTCACGTTACCAAAATATGGAATATCGCCGCTGCGGCCGTAGCGGCCTGAAACTGCCGGC CATTTCACTCGGCCTATGGCATAACTTTGGCGACACCACGCTGTATGACAACGCGCGTAAGCTGATCCACTGCGCTTTCG ACCGTGGGATCACTCATTTTGACTTGGCCAACAACTATGGCCCGCCCCCCGGTTCCGCCGAGGAAAACTTCGGCCGTATT CTCAGCGCGGACCTGAAGCCCTGGCGCGATGAGCTGATCATCGCCTCAAAAGCCGGTTACACCATGTGGCCAGGCCCTTA TGGCGACTGGGGATCGAAAAAATATCTGGTTGCCAGCCTGGATCAAAGCCTGCAGCGCATGGGGCTGGAGTACGTGGATA TCTTCTACCACCATCGCCCGGATCCGGATACGCCGCTGGAAGAAACCATGGCAACGCTGGATTTGCTGGTGCGTCAGGGC AAGGCGCTGTACGTCGGGCTGTCCAACTACCCGGCCGACCGCGCGCGCCAGGCGTTTGCTATTCTGCAAAAACTTGGCAC GCCGTGCGTGATCCATCAGCCGAAATACTCAATGTTCGAACGTTGGGTTGAGCCAGAATTACTGGACACGCTGGAAGAAC ACGGCGTAGGCTCCATCGCCTTCTCACCGCTGGCCGGAGGCCTGCTGACCGATCGCTATCTGCAGGGGATCCCGCAAGAT TCACGCGCCGCCAGCAGCAGCCAGTTCCTGCAACCCGGCCAACTCACCGACGATAAGTTGGATAAGGTGCGTCGGCTCGA TGCGCTGGCACAACAGCGCGGACAGAAGCTGTCGCAAATGGCACTGGCCTGGGTATTACGTGGCGACCGCGTCACTTCGG TACTGATCGGGGCCAGCAAGACTGGCCAGATTGAAGATGCCGTCGGCATGTTGGCTAATCGCAGCTTCAGCGATGACGAA ATAACTCAGATCGAACAAATACTGATGTAA
Upstream 100 bases:
>100_bases TTTGTCCCGTTATGGCGATTAAGCGTGATCGGGGACTCTGACAACCCTTGTGAAAACGCATACACTAAAATTCATTTCAC CTCTGCTGAAAAGGGTTCCT
Downstream 100 bases:
>100_bases TCGCTTACAATTCTCGCCGGTTTCCCCACCGGCGATACCCTATTTCGGCCAGACAAATCTTAAATCACTCGCCTCCGATC GTTTTTCAGATTCTCTCTAA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MLYQADSSRYQNMEYRRCGRSGLKLPAISLGLWHNFGDTTLYDNARKLIHCAFDRGITHFDLANNYGPPPGSAEENFGRI LSADLKPWRDELIIASKAGYTMWPGPYGDWGSKKYLVASLDQSLQRMGLEYVDIFYHHRPDPDTPLEETMATLDLLVRQG KALYVGLSNYPADRARQAFAILQKLGTPCVIHQPKYSMFERWVEPELLDTLEEHGVGSIAFSPLAGGLLTDRYLQGIPQD SRAASSSQFLQPGQLTDDKLDKVRRLDALAQQRGQKLSQMALAWVLRGDRVTSVLIGASKTGQIEDAVGMLANRSFSDDE ITQIEQILM
Sequences:
>Translated_329_residues MLYQADSSRYQNMEYRRCGRSGLKLPAISLGLWHNFGDTTLYDNARKLIHCAFDRGITHFDLANNYGPPPGSAEENFGRI LSADLKPWRDELIIASKAGYTMWPGPYGDWGSKKYLVASLDQSLQRMGLEYVDIFYHHRPDPDTPLEETMATLDLLVRQG KALYVGLSNYPADRARQAFAILQKLGTPCVIHQPKYSMFERWVEPELLDTLEEHGVGSIAFSPLAGGLLTDRYLQGIPQD SRAASSSQFLQPGQLTDDKLDKVRRLDALAQQRGQKLSQMALAWVLRGDRVTSVLIGASKTGQIEDAVGMLANRSFSDDE ITQIEQILM >Mature_329_residues MLYQADSSRYQNMEYRRCGRSGLKLPAISLGLWHNFGDTTLYDNARKLIHCAFDRGITHFDLANNYGPPPGSAEENFGRI LSADLKPWRDELIIASKAGYTMWPGPYGDWGSKKYLVASLDQSLQRMGLEYVDIFYHHRPDPDTPLEETMATLDLLVRQG KALYVGLSNYPADRARQAFAILQKLGTPCVIHQPKYSMFERWVEPELLDTLEEHGVGSIAFSPLAGGLLTDRYLQGIPQD SRAASSSQFLQPGQLTDDKLDKVRRLDALAQQRGQKLSQMALAWVLRGDRVTSVLIGASKTGQIEDAVGMLANRSFSDDE ITQIEQILM
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=35.8895705521472, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4504825, Length=340, Percent_Identity=35.2941176470588, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI27436964, Length=316, Percent_Identity=32.5949367088608, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=32.6153846153846, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI27436966, Length=307, Percent_Identity=33.2247557003257, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI27436971, Length=315, Percent_Identity=33.968253968254, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI41152114, Length=116, Percent_Identity=40.5172413793103, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI223718702, Length=187, Percent_Identity=33.6898395721925, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI41327764, Length=118, Percent_Identity=38.135593220339, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=58.1818181818182, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI87081735, Length=322, Percent_Identity=29.5031055900621, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=29.1066282420749, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788081, Length=239, Percent_Identity=25.1046025104602, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=24.0356083086053, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323998, Length=321, Percent_Identity=23.98753894081, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=250, Percent_Identity=24.4, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319958, Length=301, Percent_Identity=24.2524916943522, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319951, Length=257, Percent_Identity=25.6809338521401, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640980, Length=344, Percent_Identity=27.6162790697674, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI45549126, Length=344, Percent_Identity=27.6162790697674, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24646155, Length=307, Percent_Identity=28.6644951140065, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646159, Length=300, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36902; Mature: 36902
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYQADSSRYQNMEYRRCGRSGLKLPAISLGLWHNFGDTTLYDNARKLIHCAFDRGITHF CCCCCCCHHHHCCHHHHHCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE DLANNYGPPPGSAEENFGRILSADLKPWRDELIIASKAGYTMWPGPYGDWGSKKYLVASL ECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCEECCCCCCCCCCCCHHHHHH DQSLQRMGLEYVDIFYHHRPDPDTPLEETMATLDLLVRQGKALYVGLSNYPADRARQAFA HHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH ILQKLGTPCVIHQPKYSMFERWVEPELLDTLEEHGVGSIAFSPLAGGLLTDRYLQGIPQD HHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHCCCCH SRAASSSQFLQPGQLTDDKLDKVRRLDALAQQRGQKLSQMALAWVLRGDRVTSVLIGASK HHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC TGQIEDAVGMLANRSFSDDEITQIEQILM CCCHHHHHHHHHCCCCCCHHHHHHHHHHC >Mature Secondary Structure MLYQADSSRYQNMEYRRCGRSGLKLPAISLGLWHNFGDTTLYDNARKLIHCAFDRGITHF CCCCCCCHHHHCCHHHHHCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE DLANNYGPPPGSAEENFGRILSADLKPWRDELIIASKAGYTMWPGPYGDWGSKKYLVASL ECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCEECCCCCCCCCCCCHHHHHH DQSLQRMGLEYVDIFYHHRPDPDTPLEETMATLDLLVRQGKALYVGLSNYPADRARQAFA HHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH ILQKLGTPCVIHQPKYSMFERWVEPELLDTLEEHGVGSIAFSPLAGGLLTDRYLQGIPQD HHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHCCCCH SRAASSSQFLQPGQLTDDKLDKVRRLDALAQQRGQKLSQMALAWVLRGDRVTSVLIGASK HHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC TGQIEDAVGMLANRSFSDDEITQIEQILM CCCHHHHHHHHHCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]