| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfaE [H]
Identifier: 157371510
GI number: 157371510
Start: 3616262
End: 3616522
Strand: Direct
Name: yfaE [H]
Synonym: Spro_3273
Alternate gene names: 157371510
Gene position: 3616262-3616522 (Clockwise)
Preceding gene: 157371509
Following gene: 157371513
Centisome position: 66.37
GC content: 54.02
Gene sequence:
>261_bases ATGGCATCATCAATCGTCACGCTGCGTGCCAGTGGTACGCAGCTATCCTGCCCCAAAAGTGAAAACTGTCTGCTCGACGT GCTGGAATTGCACGACGTTGAGGTGGAATACCAGTGCCGTTCCGGCTATTGCGGCGCCTGCCGCCTGAAGTTGGTGAAAG GTGATGTGGTTTACCGACAGCCGCCATTGGCATTTATCAACGACGGTGAAATCCTGCCCTGCTGCTGTATGCCACTGACC GATATCGAGCTGGAAATTTGA
Upstream 100 bases:
>100_bases GCAGGTTGCACCGCAGGAAGTGGAAGTCAGCTCCTACCTGGTCGGCCAGATCGACTCGGAAGTGCATGCCGACGACCTGA GCGACTTCGAACTCTAAGCG
Downstream 100 bases:
>100_bases AGAGTTGGGTGCCTGAACCACGCCTGAAGACCAGAAGGCGGGGTTTCCCCCGCCCTATGATTACCGCTTCACATCACAAG CTAACCTGATCAATATAGTG
Product: 2Fe-2S ferredoxin YfaE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLT DIELEI
Sequences:
>Translated_86_residues MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLT DIELEI >Mature_85_residues ASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLTD IELEI
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788568, Length=81, Percent_Identity=59.2592592592593, Blast_Score=97, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2 [H]
EC number: NA
Molecular weight: Translated: 9479; Mature: 9348
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQ CCCCEEEEEECCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCEEEEC PPLAFINDGEILPCCCMPLTDIELEI CCEEEEECCCEEEEECCCCCEEEEEC >Mature Secondary Structure ASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQ CCCEEEEEECCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCEEEEC PPLAFINDGEILPCCCMPLTDIELEI CCEEEEECCCEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]