| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is torZ [H]
Identifier: 157371470
GI number: 157371470
Start: 3564471
End: 3566951
Strand: Direct
Name: torZ [H]
Synonym: Spro_3233
Alternate gene names: 157371470
Gene position: 3564471-3566951 (Clockwise)
Preceding gene: 157371469
Following gene: 157371471
Centisome position: 65.42
GC content: 59.17
Gene sequence:
>2481_bases ATGAGCAAATATCAACAACAAGCGTTAAAAATGAGCCGCCGCCGCTTCCTGACCGGTGCTACCGCGCTGGCCGCTGCCCC ATTGCTGGCAGGCCTGTGGCCCAAGTCAGCGCTGGCGCAGGCCATCAGCCAGGCGCTGCCGCAATTTGTGGTGCTGCGTC AGGCGCAAAAAGGCATTCTGACCGGCGCACACTGGGGCGCTTTTGAAGCCATAGTGCAGGACGGCAAAATGGTCGGCGTG CAGCCGGTCAAGGACGATCCTTACCCGAACGAACTGATCACCATGGCGCCCTACCAGGTACATGCCGAAAACCGCATCAA ATATCCGATGGTGCGTAAAAGCTGGCTGGAAGGCGGGCCTGGCAGCCATACCGAGCTGCGCGGCCGCGACGAATGGGTAC GCGTCAGCTGGGACAAGGCGATTGAACTGGTTTGTGGCGAGATCACCCGTCTGCAAAAAGATCACGGCCCGCAGTCAATC TATGCCGGTTCCTATGGCTGGAAAAGCGTCGGCATGCTGCATAACAGCCGCACGCTGCTGCAACGCCTGATGAACCTGAC CGGTGGCTTCCTCGGTTATGCCGGTGACTATTCCACCGGTGCCGCACAGGTGATCATGTCACACGTGGTCGGCTCCATGG AGGTTTACGAACAGCAAACCGCCTGGCCGAACGTGATCGAAAACAGCCAACTGGTGGTATTGTGGGGCTGTAACCCGATG ATCACGCTGAAAAACAGTTGGAACGTGCCGGACCACTACGGCCAGACCGGCTTTGAGGCGCTGAAGAAGAAAGGCACCCG CGTGATCAGCATCGACCCGGTGCATAACGACAGCGCCAAATTTATCGATGCGCAGTGGATCGCTCCACGCCCTTATACCG ATGGCGCCATGTTGATCGGCATCGCTCACACGCTGCTGACAGAGAAACTGCATAACCCGGACTTCCTGAAAACCTACACC GCCGGCTTCGACAAGTTCCAGGCTTATCTGCTGGGCGAAACCGATGGCACACCGAAAACTGCCGAATGGGCCGCCGATGT TTGCGGCGTCGATGCCGACGTATTGCGCCAACTGGCACGCGACATGGCGAAAAATCGCACCATGATCATGGGCGGTTGGG GTATTCAACGTCAGCATCATGGCGAGCAGCAACACTGGCTGTTGGTCACCGTGGCGGCGATGCTCGGCCAAATTGGCCTG CCGGGCGGCGGCTTCGGCTTCAGCTATCACTACTCTTCCGGCGGTAGCCCGACGGCGAAAGGCGGCATCATTTCCGGTAT TTCTGCCGGTAATGCGCCGAAGAACTCACCGGCCCCGATCCCGGTGGCACGCATCGCCGAATGTCTGAGCAATCCGGGCA AGACCATTAATTTCAACGGCACACAGGTCACCTACCCCGAAGTGAAAATGGTGTATGTGGCCGGTGGCAACACCTTCCAC CAGCACCAGGACACCAACAATCTGGTCAAGGCCTGGCAACGGCCGGACACCATCGTGGTGAACGAACCTTACTGGACCGC CACCGCCAAACACGCCGATATCGTGCTGCCGGCCACCACCAGCTATGAACGTAACGATCTGGAAATGGGCGGCGACTACT CGCAACTGTACGTGTTCCCAATGCATCAGTGCGTGGAGCCGCAGCATGAGTCGCGCAGCGATTTCGATATCTTCGCGGCC ATGGCGGCCAAGCTGGGTGTGCAGGATGCCTTTACCGAAGGCAAAGATGAGACTCAGTGGCTCAAAGGCATGTACGACGA CATGAAAACCCAGGCGCGCGCCGCCCGGGTGGCCCTGCCGCCATTCGACATGTTCTGGGCATCCAACAACTATGTGCGTT TCCCGGTGCCCGAGGCCAATACCCAATGGGTACGTTTCGCCGACTATCGCGAAAACCCGCTGCTCAATCCGTTGGGTACG CCATCCGGTAAGATCGAGATCTACTCCGACGCCATTGCCAAAATGAAGTATCAGGATTGCCCGGGCATTCCGACCTGGAT GCCGCCGCATGAATGGTATCGCGGGCCGGAGGCGGTTAAATATCCGCTGTCGCTGAACACCGCGCACCCGATCAACCGTC TGCACTCACAGCTCGACAATACGCCGCTGCGTAAAAAGTATGCGGTAGCAGACCGGGAAGCGATTGTGATCCATCCGCAG GACGCCAAGTCACGCGGTATCGCCAGCGGCGATCTGGTGCGCGCCTTTAACGATCGCGGCCAGATCCTGGTCGGTGCAGT AGTCAGTGAAGACGTGCGCCCTGGCGTGGTACGGATCAGCGAAGGGGCCTGGTTCGATCCGGCCGATCCTTCTCAGCCTG GCTCGCTGTGCAAGAACGGTAACGTCAACTGCCTGACCTTCGACGTCGGCTCCTCCAGCCTGGCGCAGGGGAACTGTGGC CAGATGGCCCAGTTGCAGATCGAGAAGTATCAGGGTGAAGTGCTGAAAAACACCGCGCACGACGTGCCGGCTGGCGCGTA A
Upstream 100 bases:
>100_bases GCTGACGCAGGAACAACTGCGCGTTCTGACACAATACGTGCAGAAACACGCCAGTGACATGCAGCCAACCAAACCTGCCA AGCTTTAAGGGAGAAGCGAA
Downstream 100 bases:
>100_bases CGGGTCATAGCGTAATACCGGGGCGATGGTGACATCGCCCTTTTTTATGCCTTTATACCGGAAAAAAACTTTACCAGTAA AAGGAATGAAACCGGTTTCG
Product: molybdopterin guanine dinucleotide-containing S/N-oxide reductase
Products: NA
Alternate protein names: TMAO reductase; Trimethylamine oxidase [H]
Number of amino acids: Translated: 826; Mature: 825
Protein sequence:
>826_residues MSKYQQQALKMSRRRFLTGATALAAAPLLAGLWPKSALAQAISQALPQFVVLRQAQKGILTGAHWGAFEAIVQDGKMVGV QPVKDDPYPNELITMAPYQVHAENRIKYPMVRKSWLEGGPGSHTELRGRDEWVRVSWDKAIELVCGEITRLQKDHGPQSI YAGSYGWKSVGMLHNSRTLLQRLMNLTGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIENSQLVVLWGCNPM ITLKNSWNVPDHYGQTGFEALKKKGTRVISIDPVHNDSAKFIDAQWIAPRPYTDGAMLIGIAHTLLTEKLHNPDFLKTYT AGFDKFQAYLLGETDGTPKTAEWAADVCGVDADVLRQLARDMAKNRTMIMGGWGIQRQHHGEQQHWLLVTVAAMLGQIGL PGGGFGFSYHYSSGGSPTAKGGIISGISAGNAPKNSPAPIPVARIAECLSNPGKTINFNGTQVTYPEVKMVYVAGGNTFH QHQDTNNLVKAWQRPDTIVVNEPYWTATAKHADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVEPQHESRSDFDIFAA MAAKLGVQDAFTEGKDETQWLKGMYDDMKTQARAARVALPPFDMFWASNNYVRFPVPEANTQWVRFADYRENPLLNPLGT PSGKIEIYSDAIAKMKYQDCPGIPTWMPPHEWYRGPEAVKYPLSLNTAHPINRLHSQLDNTPLRKKYAVADREAIVIHPQ DAKSRGIASGDLVRAFNDRGQILVGAVVSEDVRPGVVRISEGAWFDPADPSQPGSLCKNGNVNCLTFDVGSSSLAQGNCG QMAQLQIEKYQGEVLKNTAHDVPAGA
Sequences:
>Translated_826_residues MSKYQQQALKMSRRRFLTGATALAAAPLLAGLWPKSALAQAISQALPQFVVLRQAQKGILTGAHWGAFEAIVQDGKMVGV QPVKDDPYPNELITMAPYQVHAENRIKYPMVRKSWLEGGPGSHTELRGRDEWVRVSWDKAIELVCGEITRLQKDHGPQSI YAGSYGWKSVGMLHNSRTLLQRLMNLTGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIENSQLVVLWGCNPM ITLKNSWNVPDHYGQTGFEALKKKGTRVISIDPVHNDSAKFIDAQWIAPRPYTDGAMLIGIAHTLLTEKLHNPDFLKTYT AGFDKFQAYLLGETDGTPKTAEWAADVCGVDADVLRQLARDMAKNRTMIMGGWGIQRQHHGEQQHWLLVTVAAMLGQIGL PGGGFGFSYHYSSGGSPTAKGGIISGISAGNAPKNSPAPIPVARIAECLSNPGKTINFNGTQVTYPEVKMVYVAGGNTFH QHQDTNNLVKAWQRPDTIVVNEPYWTATAKHADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVEPQHESRSDFDIFAA MAAKLGVQDAFTEGKDETQWLKGMYDDMKTQARAARVALPPFDMFWASNNYVRFPVPEANTQWVRFADYRENPLLNPLGT PSGKIEIYSDAIAKMKYQDCPGIPTWMPPHEWYRGPEAVKYPLSLNTAHPINRLHSQLDNTPLRKKYAVADREAIVIHPQ DAKSRGIASGDLVRAFNDRGQILVGAVVSEDVRPGVVRISEGAWFDPADPSQPGSLCKNGNVNCLTFDVGSSSLAQGNCG QMAQLQIEKYQGEVLKNTAHDVPAGA >Mature_825_residues SKYQQQALKMSRRRFLTGATALAAAPLLAGLWPKSALAQAISQALPQFVVLRQAQKGILTGAHWGAFEAIVQDGKMVGVQ PVKDDPYPNELITMAPYQVHAENRIKYPMVRKSWLEGGPGSHTELRGRDEWVRVSWDKAIELVCGEITRLQKDHGPQSIY AGSYGWKSVGMLHNSRTLLQRLMNLTGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIENSQLVVLWGCNPMI TLKNSWNVPDHYGQTGFEALKKKGTRVISIDPVHNDSAKFIDAQWIAPRPYTDGAMLIGIAHTLLTEKLHNPDFLKTYTA GFDKFQAYLLGETDGTPKTAEWAADVCGVDADVLRQLARDMAKNRTMIMGGWGIQRQHHGEQQHWLLVTVAAMLGQIGLP GGGFGFSYHYSSGGSPTAKGGIISGISAGNAPKNSPAPIPVARIAECLSNPGKTINFNGTQVTYPEVKMVYVAGGNTFHQ HQDTNNLVKAWQRPDTIVVNEPYWTATAKHADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVEPQHESRSDFDIFAAM AAKLGVQDAFTEGKDETQWLKGMYDDMKTQARAARVALPPFDMFWASNNYVRFPVPEANTQWVRFADYRENPLLNPLGTP SGKIEIYSDAIAKMKYQDCPGIPTWMPPHEWYRGPEAVKYPLSLNTAHPINRLHSQLDNTPLRKKYAVADREAIVIHPQD AKSRGIASGDLVRAFNDRGQILVGAVVSEDVRPGVVRISEGAWFDPADPSQPGSLCKNGNVNCLTFDVGSSSLAQGNCGQ MAQLQIEKYQGEVLKNTAHDVPAGA
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=829, Percent_Identity=51.8697225572979, Blast_Score=834, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=775, Percent_Identity=49.0322580645161, Blast_Score=753, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=833, Percent_Identity=45.9783913565426, Blast_Score=718, Evalue=0.0, Organism=Escherichia coli, GI87081797, Length=750, Percent_Identity=32.4, Blast_Score=332, Evalue=9e-92, Organism=Escherichia coli, GI1787870, Length=851, Percent_Identity=29.1421856639248, Blast_Score=285, Evalue=1e-77, Organism=Escherichia coli, GI171474008, Length=748, Percent_Identity=30.8823529411765, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI3868721, Length=680, Percent_Identity=21.1764705882353, Blast_Score=109, Evalue=9e-25, Organism=Escherichia coli, GI1787477, Length=275, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 90964; Mature: 90833
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYQQQALKMSRRRFLTGATALAAAPLLAGLWPKSALAQAISQALPQFVVLRQAQKGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCE TGAHWGAFEAIVQDGKMVGVQPVKDDPYPNELITMAPYQVHAENRIKYPMVRKSWLEGGP ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHCCCC GSHTELRGRDEWVRVSWDKAIELVCGEITRLQKDHGPQSIYAGSYGWKSVGMLHNSRTLL CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHH QRLMNLTGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIENSQLVVLWGCNPM HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCE ITLKNSWNVPDHYGQTGFEALKKKGTRVISIDPVHNDSAKFIDAQWIAPRPYTDGAMLIG EEECCCCCCCHHCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHH IAHTLLTEKLHNPDFLKTYTAGFDKFQAYLLGETDGTPKTAEWAADVCGVDADVLRQLAR HHHHHHHHHCCCCCHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHH DMAKNRTMIMGGWGIQRQHHGEQQHWLLVTVAAMLGQIGLPGGGFGFSYHYSSGGSPTAK HHHCCCEEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC GGIISGISAGNAPKNSPAPIPVARIAECLSNPGKTINFNGTQVTYPEVKMVYVAGGNTFH CCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCEEECCCEEEEEEECCCEEC QHQDTNNLVKAWQRPDTIVVNEPYWTATAKHADIVLPATTSYERNDLEMGGDYSQLYVFP CCCCCHHHHHHHCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEE MHQCVEPQHESRSDFDIFAAMAAKLGVQDAFTEGKDETQWLKGMYDDMKTQARAARVALP HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECC PFDMFWASNNYVRFPVPEANTQWVRFADYRENPLLNPLGTPSGKIEIYSDAIAKMKYQDC CHHHEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCC PGIPTWMPPHEWYRGPEAVKYPLSLNTAHPINRLHSQLDNTPLRKKYAVADREAIVIHPQ CCCCCCCCCHHHHCCCCCEEECEECCCCCHHHHHHHHHCCCCCHHHHEECCCCEEEECCC DAKSRGIASGDLVRAFNDRGQILVGAVVSEDVRPGVVRISEGAWFDPADPSQPGSLCKNG CCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCC NVNCLTFDVGSSSLAQGNCGQMAQLQIEKYQGEVLKNTAHDVPAGA CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SKYQQQALKMSRRRFLTGATALAAAPLLAGLWPKSALAQAISQALPQFVVLRQAQKGIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCE TGAHWGAFEAIVQDGKMVGVQPVKDDPYPNELITMAPYQVHAENRIKYPMVRKSWLEGGP ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHCCCC GSHTELRGRDEWVRVSWDKAIELVCGEITRLQKDHGPQSIYAGSYGWKSVGMLHNSRTLL CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHH QRLMNLTGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIENSQLVVLWGCNPM HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCE ITLKNSWNVPDHYGQTGFEALKKKGTRVISIDPVHNDSAKFIDAQWIAPRPYTDGAMLIG EEECCCCCCCHHCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHH IAHTLLTEKLHNPDFLKTYTAGFDKFQAYLLGETDGTPKTAEWAADVCGVDADVLRQLAR HHHHHHHHHCCCCCHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHH DMAKNRTMIMGGWGIQRQHHGEQQHWLLVTVAAMLGQIGLPGGGFGFSYHYSSGGSPTAK HHHCCCEEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC GGIISGISAGNAPKNSPAPIPVARIAECLSNPGKTINFNGTQVTYPEVKMVYVAGGNTFH CCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCEEECCCEEEEEEECCCEEC QHQDTNNLVKAWQRPDTIVVNEPYWTATAKHADIVLPATTSYERNDLEMGGDYSQLYVFP CCCCCHHHHHHHCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEE MHQCVEPQHESRSDFDIFAAMAAKLGVQDAFTEGKDETQWLKGMYDDMKTQARAARVALP HHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECC PFDMFWASNNYVRFPVPEANTQWVRFADYRENPLLNPLGTPSGKIEIYSDAIAKMKYQDC CHHHEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCC PGIPTWMPPHEWYRGPEAVKYPLSLNTAHPINRLHSQLDNTPLRKKYAVADREAIVIHPQ CCCCCCCCCHHHHCCCCCEEECEECCCCCHHHHHHHHHCCCCCHHHHEECCCCEEEECCC DAKSRGIASGDLVRAFNDRGQILVGAVVSEDVRPGVVRISEGAWFDPADPSQPGSLCKNG CCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCC NVNCLTFDVGSSSLAQGNCGQMAQLQIEKYQGEVLKNTAHDVPAGA CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]