| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371246
Identifier: 157371246
GI number: 157371246
Start: 3306251
End: 3307969
Strand: Direct
Name: 157371246
Synonym: Spro_3006
Alternate gene names: NA
Gene position: 3306251-3307969 (Clockwise)
Preceding gene: 157371245
Following gene: 157371247
Centisome position: 60.68
GC content: 60.97
Gene sequence:
>1719_bases ATGCGATTTTCTATTGTCAAAAATAAAAGTGGCCAGGTTCCGCCACAGAGCAGCTGCGACTTTCTGCCGCCCGGCGGCAC CATTGGCCGTAGCGTGGACAACAACCTGGTATTGCCGGACGAAGAGCGTGCCATCTCCCGGTTGCAGGCGATCGTACATA TTTCTGCTGATGGCGAATGCCGCGTAACCAACCGTGGCAACGTCACCCGCGTGTTGCTGAACGATATTCCCCTGGAGCGC GGCCGTCAGGTGGAGCTGCAGGATGGTGATATTCTCGGCATCGACGATTATCAGATCCAGGTCAGCTCCTTACAGCAAGC GGCTGCACCGCAGGCTCAGCCGACAATTAAAACCGCCGACACCGCGCCAGTCACTACACCGGCTGCCAAAGAGAAAGCGG CAGCCCCCATCCCGAATGAGATCTGGGACAGCCTGGTAGAAGAGTTCACGCCAGCCACGGCGGTGACTGCGCCCCCGGCA CCGGTCATTAATCAGGACAGCCATCCGCTGCTGGAAACGCCGGAGCCTGAGATGAACCCGGCCGATCCGCTGGCGCAGTT GGCGGGCGACGTCGAACTACGTCAACTGCAGTCGCAGCAAACCGATCCGGCAATGTTGTTCAACACCGACACCACCTTCG AGCGCGATCCTATTTTGGCCGATACCACCCCAAGTGCGCTGTTGGCCGAAAAACACCCGACCACCAGCCAGGCTGCGCCG ATCAAACCCGCTGAGGCGGAAAAAAATGCCCAGGAGCTCGATCCGCTGGCGCTGTTTGGCGGTTCTTCTGCCCCCACGTC GCCGGACGCGTTGAACAGCAACGATCCGCTCGGCCTGCTGATGGGCAGCGCTGTCCCCCTGGCACAGCCAGAGCCTCCGG CTGCGGTGCCACCACCGGCGTCCCCATTACAGCAACCGGTGATGGCTGCCCCGGTGGAAGCACCGCAACCCAAAGCCGCG CCGCAACCTGAGCCACAGTTTTCGCCTTCAACCCCACCGCCCTCACCGCAACCTCGTCCACGCCCGGCCAACCGCCTGGG TATCGATCCGATTGCCTATCAGACTGCGCGTGCCCAAAACGGTAGCGCACCTGCGGGTGAGCGGTTGGAAGGCCCACTGT TAGCCGCATTACTGCAGGGGGTGGGTCTGGATGACCTGCAGCCACAGCCACACTTTGATGAGCAGCAGCTCCGCCAGGCC GGTCGGCTGCTGAGCCTGTTTTCTCAGGGGACCGTCGCCCTGCTCTCTTCCCGCTCAATCCTTAAGCGCGGTGTGAAGGC CGAGATGACCATGATCCTCGACGAGGCCAATAACCCGTTCAAACTGCTGCCCTCGGGCAAAACGGTATTGATGCAGATGT TCGGCAGCAAAATGCCGGGGTTTATGCCGCCGGAACAGGCGGTACGCGACGCACTGATCGACCTGCAGGCGCACCAGTTA GGCATGATCGCCGGTATTCGCGCCATCATCGCCGCCATGCTGCAGTCGTTCAATCCGGATCGCCTCGAAGAGGAGGCGCG CAAGGAAGGCGCGGCACCTCGTCTGTCCCTGCCGGCCAGCCGCAAGGCGGCGCTGTGGGATTACTTCGTGAAAAGCTATC AGCAGACCTCCGGCGAAATCGAAGACGACTTTCACACCCTGTTCGGCGAAGCCTTCCTGCACGCCTATGACGTTGAAGTG AATCAATATAAAGACTCACAGACCCAACCGGACGCGTAA
Upstream 100 bases:
>100_bases CCGCATACTAACCGGCTTACCAAAATAACCGCCAATTTTGGTAAGCCAGACACCGAAATAATAATTAACTGCAATATATC CTAATCAGCAGGAATGCCTT
Downstream 100 bases:
>100_bases TGAATATCACTATAGCCTCTACCTCCAATCAGGGCGGCCGCGCCTCTAATCAGGATCAGACCGGTGAAGTGGTCGGTAAC CGCGCCGCCTGCTTCGTGGT
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Type VI Secretion System FHA Domain Protein; Type VI Secretion System Core Protein; Forkhead-Associated Protein; Forkhead-Associated Protein Type VI Secretion System; FHA-Family Protein; Regulatory Protein; Secreted Protein; Type VI Secretion System FHA Domain-Containing Protein
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MRFSIVKNKSGQVPPQSSCDFLPPGGTIGRSVDNNLVLPDEERAISRLQAIVHISADGECRVTNRGNVTRVLLNDIPLER GRQVELQDGDILGIDDYQIQVSSLQQAAAPQAQPTIKTADTAPVTTPAAKEKAAAPIPNEIWDSLVEEFTPATAVTAPPA PVINQDSHPLLETPEPEMNPADPLAQLAGDVELRQLQSQQTDPAMLFNTDTTFERDPILADTTPSALLAEKHPTTSQAAP IKPAEAEKNAQELDPLALFGGSSAPTSPDALNSNDPLGLLMGSAVPLAQPEPPAAVPPPASPLQQPVMAAPVEAPQPKAA PQPEPQFSPSTPPPSPQPRPRPANRLGIDPIAYQTARAQNGSAPAGERLEGPLLAALLQGVGLDDLQPQPHFDEQQLRQA GRLLSLFSQGTVALLSSRSILKRGVKAEMTMILDEANNPFKLLPSGKTVLMQMFGSKMPGFMPPEQAVRDALIDLQAHQL GMIAGIRAIIAAMLQSFNPDRLEEEARKEGAAPRLSLPASRKAALWDYFVKSYQQTSGEIEDDFHTLFGEAFLHAYDVEV NQYKDSQTQPDA
Sequences:
>Translated_572_residues MRFSIVKNKSGQVPPQSSCDFLPPGGTIGRSVDNNLVLPDEERAISRLQAIVHISADGECRVTNRGNVTRVLLNDIPLER GRQVELQDGDILGIDDYQIQVSSLQQAAAPQAQPTIKTADTAPVTTPAAKEKAAAPIPNEIWDSLVEEFTPATAVTAPPA PVINQDSHPLLETPEPEMNPADPLAQLAGDVELRQLQSQQTDPAMLFNTDTTFERDPILADTTPSALLAEKHPTTSQAAP IKPAEAEKNAQELDPLALFGGSSAPTSPDALNSNDPLGLLMGSAVPLAQPEPPAAVPPPASPLQQPVMAAPVEAPQPKAA PQPEPQFSPSTPPPSPQPRPRPANRLGIDPIAYQTARAQNGSAPAGERLEGPLLAALLQGVGLDDLQPQPHFDEQQLRQA GRLLSLFSQGTVALLSSRSILKRGVKAEMTMILDEANNPFKLLPSGKTVLMQMFGSKMPGFMPPEQAVRDALIDLQAHQL GMIAGIRAIIAAMLQSFNPDRLEEEARKEGAAPRLSLPASRKAALWDYFVKSYQQTSGEIEDDFHTLFGEAFLHAYDVEV NQYKDSQTQPDA >Mature_572_residues MRFSIVKNKSGQVPPQSSCDFLPPGGTIGRSVDNNLVLPDEERAISRLQAIVHISADGECRVTNRGNVTRVLLNDIPLER GRQVELQDGDILGIDDYQIQVSSLQQAAAPQAQPTIKTADTAPVTTPAAKEKAAAPIPNEIWDSLVEEFTPATAVTAPPA PVINQDSHPLLETPEPEMNPADPLAQLAGDVELRQLQSQQTDPAMLFNTDTTFERDPILADTTPSALLAEKHPTTSQAAP IKPAEAEKNAQELDPLALFGGSSAPTSPDALNSNDPLGLLMGSAVPLAQPEPPAAVPPPASPLQQPVMAAPVEAPQPKAA PQPEPQFSPSTPPPSPQPRPRPANRLGIDPIAYQTARAQNGSAPAGERLEGPLLAALLQGVGLDDLQPQPHFDEQQLRQA GRLLSLFSQGTVALLSSRSILKRGVKAEMTMILDEANNPFKLLPSGKTVLMQMFGSKMPGFMPPEQAVRDALIDLQAHQL GMIAGIRAIIAAMLQSFNPDRLEEEARKEGAAPRLSLPASRKAALWDYFVKSYQQTSGEIEDDFHTLFGEAFLHAYDVEV NQYKDSQTQPDA
Specific function: Unknown
COG id: COG3456
COG function: function code T; Uncharacterized conserved protein, contains FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61348; Mature: 61348
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSIVKNKSGQVPPQSSCDFLPPGGTIGRSVDNNLVLPDEERAISRLQAIVHISADGEC CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCE RVTNRGNVTRVLLNDIPLERGRQVELQDGDILGIDDYQIQVSSLQQAAAPQAQPTIKTAD EECCCCCEEEEEEHHCCCCCCCEEEECCCCEECCCCCEEEHHHHHHHHCCCCCCCEECCC TAPVTTPAAKEKAAAPIPNEIWDSLVEEFTPATAVTAPPAPVINQDSHPLLETPEPEMNP CCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPLAQLAGDVELRQLQSQQTDPAMLFNTDTTFERDPILADTTPSALLAEKHPTTSQAAP HHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC IKPAEAEKNAQELDPLALFGGSSAPTSPDALNSNDPLGLLMGSAVPLAQPEPPAAVPPPA CCCCHHHCCHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC SPLQQPVMAAPVEAPQPKAAPQPEPQFSPSTPPPSPQPRPRPANRLGIDPIAYQTARAQN CHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC GSAPAGERLEGPLLAALLQGVGLDDLQPQPHFDEQQLRQAGRLLSLFSQGTVALLSSRSI CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH LKRGVKAEMTMILDEANNPFKLLPSGKTVLMQMFGSKMPGFMPPEQAVRDALIDLQAHQL HHCCCHHHHHHEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GMIAGIRAIIAAMLQSFNPDRLEEEARKEGAAPRLSLPASRKAALWDYFVKSYQQTSGEI HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC EDDFHTLFGEAFLHAYDVEVNQYKDSQTQPDA HHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure MRFSIVKNKSGQVPPQSSCDFLPPGGTIGRSVDNNLVLPDEERAISRLQAIVHISADGEC CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCE RVTNRGNVTRVLLNDIPLERGRQVELQDGDILGIDDYQIQVSSLQQAAAPQAQPTIKTAD EECCCCCEEEEEEHHCCCCCCCEEEECCCCEECCCCCEEEHHHHHHHHCCCCCCCEECCC TAPVTTPAAKEKAAAPIPNEIWDSLVEEFTPATAVTAPPAPVINQDSHPLLETPEPEMNP CCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPLAQLAGDVELRQLQSQQTDPAMLFNTDTTFERDPILADTTPSALLAEKHPTTSQAAP HHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC IKPAEAEKNAQELDPLALFGGSSAPTSPDALNSNDPLGLLMGSAVPLAQPEPPAAVPPPA CCCCHHHCCHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC SPLQQPVMAAPVEAPQPKAAPQPEPQFSPSTPPPSPQPRPRPANRLGIDPIAYQTARAQN CHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC GSAPAGERLEGPLLAALLQGVGLDDLQPQPHFDEQQLRQAGRLLSLFSQGTVALLSSRSI CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH LKRGVKAEMTMILDEANNPFKLLPSGKTVLMQMFGSKMPGFMPPEQAVRDALIDLQAHQL HHCCCHHHHHHEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GMIAGIRAIIAAMLQSFNPDRLEEEARKEGAAPRLSLPASRKAALWDYFVKSYQQTSGEI HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC EDDFHTLFGEAFLHAYDVEVNQYKDSQTQPDA HHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA