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The map label for this gene is 157371237

Identifier: 157371237

GI number: 157371237

Start: 3294549

End: 3295079

Strand: Direct

Name: 157371237

Synonym: Spro_2997

Alternate gene names: NA

Gene position: 3294549-3295079 (Clockwise)

Preceding gene: 157371236

Following gene: 157371238

Centisome position: 60.46

GC content: 57.44

Gene sequence:

>531_bases
ATGATAACAACACCCACCACCTCCCGCTGGTGCGGGATAGTGTTCCTGCTGTTGGGCGCATTGGTGCTCAACGGCTGCAT
GTCTTCTGCCAAGAGCGTGCCCTCGCGTTATAGCCTGGTCTTCGATGCCGACAGCCAGGTGAACGCCGCGGCAGGCCAAC
GACCGGCACCGATAAAGATTCGGGTACTGCTGCTACGTTCCGATGCGGAATTTATGGACGCTGACTTCTTCAGCCTGCAG
AGCGATGCCAAAAGCGTGCTCGGCGCCAGCCTGCTGGACAGCGACCAATTCTTCCTGACCCCGGGCCAAAGGGGCAAGAA
ACTCGGCGGCCAAAGCACGCTCGAAACTCGTTATATCGGCATCATCGCCGAATATCAGAACCTCGATGGCAAAGCCTGGC
GCATTTCACTGCCGCTACCGGAACCGACCGAGACCAATTTCTACAAGGTGTGGCAATTCTCACCGGATGAGCTGGAAGCC
CACATTGTGGCAGGCATTAATGGCCTGCACTCCGTGAAAGATCCCGACTGA

Upstream 100 bases:

>100_bases
AGGACTGCGTGAAAGTCGGCGGTGACAGCAAAGCCTGTAAAGACAGCGGTTCTGCCACCTGGATCCTCCAGTAGTTTCCC
CCTGGTTGACGAGACTCACC

Downstream 100 bases:

>100_bases
CCTGCAGCCAGGGCCAAGCGAAGTAACTATAGGTGTGACGATGAAAGATGCTCATAAGGTCGTCTGGACTGAAGGGATGT
TTTTGCGCCCTCATCATTTC

Product: putative lipoprotein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein/VasD; Outer Membrane Lipoprotein; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein VasD

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MITTPTTSRWCGIVFLLLGALVLNGCMSSAKSVPSRYSLVFDADSQVNAAAGQRPAPIKIRVLLLRSDAEFMDADFFSLQ
SDAKSVLGASLLDSDQFFLTPGQRGKKLGGQSTLETRYIGIIAEYQNLDGKAWRISLPLPEPTETNFYKVWQFSPDELEA
HIVAGINGLHSVKDPD

Sequences:

>Translated_176_residues
MITTPTTSRWCGIVFLLLGALVLNGCMSSAKSVPSRYSLVFDADSQVNAAAGQRPAPIKIRVLLLRSDAEFMDADFFSLQ
SDAKSVLGASLLDSDQFFLTPGQRGKKLGGQSTLETRYIGIIAEYQNLDGKAWRISLPLPEPTETNFYKVWQFSPDELEA
HIVAGINGLHSVKDPD
>Mature_176_residues
MITTPTTSRWCGIVFLLLGALVLNGCMSSAKSVPSRYSLVFDADSQVNAAAGQRPAPIKIRVLLLRSDAEFMDADFFSLQ
SDAKSVLGASLLDSDQFFLTPGQRGKKLGGQSTLETRYIGIIAEYQNLDGKAWRISLPLPEPTETNFYKVWQFSPDELEA
HIVAGINGLHSVKDPD

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19252; Mature: 19252

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTPTTSRWCGIVFLLLGALVLNGCMSSAKSVPSRYSLVFDADSQVNAAAGQRPAPIKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE
RVLLLRSDAEFMDADFFSLQSDAKSVLGASLLDSDQFFLTPGQRGKKLGGQSTLETRYIG
EEEEEECCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEE
IIAEYQNLDGKAWRISLPLPEPTETNFYKVWQFSPDELEAHIVAGINGLHSVKDPD
EEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MITTPTTSRWCGIVFLLLGALVLNGCMSSAKSVPSRYSLVFDADSQVNAAAGQRPAPIKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE
RVLLLRSDAEFMDADFFSLQSDAKSVLGASLLDSDQFFLTPGQRGKKLGGQSTLETRYIG
EEEEEECCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEE
IIAEYQNLDGKAWRISLPLPEPTETNFYKVWQFSPDELEAHIVAGINGLHSVKDPD
EEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA