| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371214
Identifier: 157371214
GI number: 157371214
Start: 3271237
End: 3271539
Strand: Direct
Name: 157371214
Synonym: Spro_2974
Alternate gene names: NA
Gene position: 3271237-3271539 (Clockwise)
Preceding gene: 157371213
Following gene: 157371230
Centisome position: 60.04
GC content: 55.78
Gene sequence:
>303_bases ATGAGCAAGATCCTTGCTGAGATCCATCAGGAAGTCCAAGAACTGCATCAGGCAGGATTTGTTGATGCCAGCACCATGCG CACCTTCGACATGCTGTGTTTACGCCCGGTCAAACAATATACTCCAGCGGACATCCGCGCCCTGCGCGAGCGTGAAAACG TCAGCCAGCCGGTGTTTGCCTTGCATCTAAACGTCAGCAAAAAGGCAGTGCAAAAATGGGAGCGTGGCGAAGCCGTGCCC AACTCCGCCGCCATGAAGCTTCTTTCGCTGGTCGATCGCAACGGTCTGGCGATCCTGGCCTAG
Upstream 100 bases:
>100_bases CCTGAGGGGGAGTGAATGATCGATATCTACCTTTATCTGGACTATTCGCCTTTCAGGCTTTATCAGTTGGTTAATGACAA GAGGTTGAGGAGACTGACCT
Downstream 100 bases:
>100_bases ACCGTTACTGGTAATTGACAATCACCTGATTGCTGATCACCCGCAGCGGCGGGTTCAAACTGCCGCGCGCCTGCACATAG TAGACAAAACGCAGCTCGGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Transcriptional Regulator-Like Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVP NSAAMKLLSLVDRNGLAILA
Sequences:
>Translated_100_residues MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVP NSAAMKLLSLVDRNGLAILA >Mature_99_residues SKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVPN SAAMKLLSLVDRNGLAILA
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11241; Mature: 11110
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE LHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDRNGLAILA EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEC >Mature Secondary Structure SKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE LHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDRNGLAILA EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA