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The map label for this gene is ychO [H]

Identifier: 157371141

GI number: 157371141

Start: 3188119

End: 3189612

Strand: Reverse

Name: ychO [H]

Synonym: Spro_2901

Alternate gene names: 157371141

Gene position: 3189612-3188119 (Counterclockwise)

Preceding gene: 157371144

Following gene: 157371138

Centisome position: 58.54

GC content: 57.16

Gene sequence:

>1494_bases
ATGACAGACGTTATTCATAAAGCGCGTTACCGATTGAAAAAAGTTGTGCCTTTTGCCACGGGGTGTTTACCGGCGATGGG
GTTGGCGTGGCTATGCGGCGCGTTGCCCGCCTACGCCGAATCGCCACCCGCACCGGACTCGGTTGTTCAGCAACCGGCCA
ACGATTTGCCGGAACTGGGCGGCAATGCTTCCAATGACGCCGAGCGTGAAAAAGAGTGGGCCACCATGGCCAAACAGCTG
GGCGAACGTAACCTGAATAACGTTTCGAGCCAACAGGTGCGTACCCGTGCCGAGAGCTATGCGGTCGGTCAGGCCAGCAG
CGTGCTGCAACAGCAGGCCCAGGAACTGCTTTCACCGTTGGGTAACGCCAAACTGTCGCTGGTGATGTCCGACCAGGGGG
ATTTTTCCGGCAGTAGCGGTCAGTTGTTCAGCCCGCTGTATGACGTTAACGGCTTGCTGACCTATAGCCAACTCGGCCTG
TTGCAGCAAACCGAGGGTTCGCTGGGTAATTTTGGCCTTGGCCAGCGTTGGGTCGCCGGCGATTGGCTGTTGGGGTATAA
CACGGTGCTCGACAGCGATTTCGAGCGCCATCATAACCGTGCCAGCCTGGGGGCCGAAGCCTGGGGAGATTTCCTGCGAT
TTTCCGCCAACTATTACTATCCGCTGTCGGCGCTGGCGCAACAGAGGGATAACGCCCAGTTCCTCAGCCGTCCCGCGAGC
GGATATGACATCACCACTCAGGGCTACCTGCCGTTTTACCGCCAGATTGGCGGCTCGCTCAGCTATGAACAGTACTGGGG
TGAGAACGTCGATCTGTTTGGCAGCGGCAAAAAGCAAAATGACCCGCGTGCCATGCAACTGGGGGTGAATTACACCCCGG
TCCCCCTGGTGACGGTGAAAGCGTTGCACAAGATGGGGGAAGGCGGGGTAAGTCAGGATCAGGTCGAGCTGGCGTTAAAT
TATCGGCTTGGTGTACCGCTGGTGAAGCAGATTTCGCCGGAATATGTTGCTCAGGCCAAGTCGCTGCGTGGCAGTCGTTA
TGACAACATCGAACGGAAAAATGTGCCGGTGATGGCGTTCAAGCAGCGTAAAACGCTGCAAGTGTTCCTGGCCACGCCGC
CATGGCGCCTGCAACCGGGAGAAACCTTGCCGCTGGTGCTGGAAATCAAAACCACCAACAAAATTACTCGAGTCAGTTGG
CAGGGAGATACGCAGGCACTAAGCCTGACGCCGTCGCAAAACAGTAACGATCCACATGGCTGGAGCCTGATTGTGCCGCA
ATGGGATGACTCACCGGATGCCGCCAACCGCTACCACCTGTCGGTGACGCTGGAAGATGACAAACAGCAATTGGTGACCT
CTAACTGGATCCAACTGCAGGTGACGCCGCCTTTGACCGTTTCATCTGAAATAGAGCAGGGGCTGCCACCGGCAAAAGTA
CTGCAACCACCGACTATCCCGGCAGAAACCGGGCCGTTGAACGGCAGTGATTAA

Upstream 100 bases:

>100_bases
GCCAGACTGCGCAAAGTTTGGGTGGTCTGTCGTCTGGAGTGATGGCAGCAAGAAAGGGTTTATTTGCCAACCCTCTGGAT
CAAGGGGTGGCGACTGTGCA

Downstream 100 bases:

>100_bases
CCGTTTTTTCCCTGCAGTACCCAGACGGCTGCTTCAACGCGCGATTTCAGCTTCATTTTTTTCAACAGGTGTTTGACGTG
CACCTTGACGGTGCTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTDVIHKARYRLKKVVPFATGCLPAMGLAWLCGALPAYAESPPAPDSVVQQPANDLPELGGNASNDAEREKEWATMAKQL
GERNLNNVSSQQVRTRAESYAVGQASSVLQQQAQELLSPLGNAKLSLVMSDQGDFSGSSGQLFSPLYDVNGLLTYSQLGL
LQQTEGSLGNFGLGQRWVAGDWLLGYNTVLDSDFERHHNRASLGAEAWGDFLRFSANYYYPLSALAQQRDNAQFLSRPAS
GYDITTQGYLPFYRQIGGSLSYEQYWGENVDLFGSGKKQNDPRAMQLGVNYTPVPLVTVKALHKMGEGGVSQDQVELALN
YRLGVPLVKQISPEYVAQAKSLRGSRYDNIERKNVPVMAFKQRKTLQVFLATPPWRLQPGETLPLVLEIKTTNKITRVSW
QGDTQALSLTPSQNSNDPHGWSLIVPQWDDSPDAANRYHLSVTLEDDKQQLVTSNWIQLQVTPPLTVSSEIEQGLPPAKV
LQPPTIPAETGPLNGSD

Sequences:

>Translated_497_residues
MTDVIHKARYRLKKVVPFATGCLPAMGLAWLCGALPAYAESPPAPDSVVQQPANDLPELGGNASNDAEREKEWATMAKQL
GERNLNNVSSQQVRTRAESYAVGQASSVLQQQAQELLSPLGNAKLSLVMSDQGDFSGSSGQLFSPLYDVNGLLTYSQLGL
LQQTEGSLGNFGLGQRWVAGDWLLGYNTVLDSDFERHHNRASLGAEAWGDFLRFSANYYYPLSALAQQRDNAQFLSRPAS
GYDITTQGYLPFYRQIGGSLSYEQYWGENVDLFGSGKKQNDPRAMQLGVNYTPVPLVTVKALHKMGEGGVSQDQVELALN
YRLGVPLVKQISPEYVAQAKSLRGSRYDNIERKNVPVMAFKQRKTLQVFLATPPWRLQPGETLPLVLEIKTTNKITRVSW
QGDTQALSLTPSQNSNDPHGWSLIVPQWDDSPDAANRYHLSVTLEDDKQQLVTSNWIQLQVTPPLTVSSEIEQGLPPAKV
LQPPTIPAETGPLNGSD
>Mature_496_residues
TDVIHKARYRLKKVVPFATGCLPAMGLAWLCGALPAYAESPPAPDSVVQQPANDLPELGGNASNDAEREKEWATMAKQLG
ERNLNNVSSQQVRTRAESYAVGQASSVLQQQAQELLSPLGNAKLSLVMSDQGDFSGSSGQLFSPLYDVNGLLTYSQLGLL
QQTEGSLGNFGLGQRWVAGDWLLGYNTVLDSDFERHHNRASLGAEAWGDFLRFSANYYYPLSALAQQRDNAQFLSRPASG
YDITTQGYLPFYRQIGGSLSYEQYWGENVDLFGSGKKQNDPRAMQLGVNYTPVPLVTVKALHKMGEGGVSQDQVELALNY
RLGVPLVKQISPEYVAQAKSLRGSRYDNIERKNVPVMAFKQRKTLQVFLATPPWRLQPGETLPLVLEIKTTNKITRVSWQ
GDTQALSLTPSQNSNDPHGWSLIVPQWDDSPDAANRYHLSVTLEDDKQQLVTSNWIQLQVTPPLTVSSEIEQGLPPAKVL
QPPTIPAETGPLNGSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=463, Percent_Identity=44.7084233261339, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI145693153, Length=398, Percent_Identity=30.9045226130653, Blast_Score=184, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54661; Mature: 54530

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVIHKARYRLKKVVPFATGCLPAMGLAWLCGALPAYAESPPAPDSVVQQPANDLPELG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHHHHHC
GNASNDAEREKEWATMAKQLGERNLNNVSSQQVRTRAESYAVGQASSVLQQQAQELLSPL
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GNAKLSLVMSDQGDFSGSSGQLFSPLYDVNGLLTYSQLGLLQQTEGSLGNFGLGQRWVAG
CCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEHHHHHCCHHHCCCCCCCCCCCCEEECC
DWLLGYNTVLDSDFERHHNRASLGAEAWGDFLRFSANYYYPLSALAQQRDNAQFLSRPAS
CEEECCHHHHCCHHHHHCCHHHCCHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHCCCC
GYDITTQGYLPFYRQIGGSLSYEQYWGENVDLFGSGKKQNDPRAMQLGVNYTPVPLVTVK
CCEEEECCCCHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHH
ALHKMGEGGVSQDQVELALNYRLGVPLVKQISPEYVAQAKSLRGSRYDNIERKNVPVMAF
HHHHHCCCCCCCCEEEEEEEEECCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
KQRKTLQVFLATPPWRLQPGETLPLVLEIKTTNKITRVSWQGDTQALSLTPSQNSNDPHG
CCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCC
WSLIVPQWDDSPDAANRYHLSVTLEDDKQQLVTSNWIQLQVTPPLTVSSEIEQGLPPAKV
EEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEECCCCCCHHHHHHCCCCHHH
LQPPTIPAETGPLNGSD
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDVIHKARYRLKKVVPFATGCLPAMGLAWLCGALPAYAESPPAPDSVVQQPANDLPELG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHHHHHC
GNASNDAEREKEWATMAKQLGERNLNNVSSQQVRTRAESYAVGQASSVLQQQAQELLSPL
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GNAKLSLVMSDQGDFSGSSGQLFSPLYDVNGLLTYSQLGLLQQTEGSLGNFGLGQRWVAG
CCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEHHHHHCCHHHCCCCCCCCCCCCEEECC
DWLLGYNTVLDSDFERHHNRASLGAEAWGDFLRFSANYYYPLSALAQQRDNAQFLSRPAS
CEEECCHHHHCCHHHHHCCHHHCCHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHCCCC
GYDITTQGYLPFYRQIGGSLSYEQYWGENVDLFGSGKKQNDPRAMQLGVNYTPVPLVTVK
CCEEEECCCCHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHH
ALHKMGEGGVSQDQVELALNYRLGVPLVKQISPEYVAQAKSLRGSRYDNIERKNVPVMAF
HHHHHCCCCCCCCEEEEEEEEECCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
KQRKTLQVFLATPPWRLQPGETLPLVLEIKTTNKITRVSWQGDTQALSLTPSQNSNDPHG
CCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCC
WSLIVPQWDDSPDAANRYHLSVTLEDDKQQLVTSNWIQLQVTPPLTVSSEIEQGLPPAKV
EEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEECCCCCCHHHHHHCCCCHHH
LQPPTIPAETGPLNGSD
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]