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The map label for this gene is yobD [C]

Identifier: 157371056

GI number: 157371056

Start: 3097443

End: 3097901

Strand: Direct

Name: yobD [C]

Synonym: Spro_2816

Alternate gene names: 157371056

Gene position: 3097443-3097901 (Clockwise)

Preceding gene: 157371055

Following gene: 157371057

Centisome position: 56.85

GC content: 44.44

Gene sequence:

>459_bases
ATGTCGCTGACCGATGGCGTATTACTGATTTTCACCGCGCTGATGCTGGTGTATGCGATTTACGACGAGTTCGGCATGAA
CCTGCTGAAAGGCAAAACCTTGCTCAAGGTGCAGTTAAAGCGCCGGAATCGGATTGATTGCCTGATATTTGTCGGCCTGA
TCACCATTCTGCTCTACCGAAATGTCACCACCCAGGGTGCGGTAATAACCACCTATCTGCTTATTTCTTTAGCACTGATC
GCCATTTATATTTCTTATATCCGCTGGCCCAAGATGTTGTTTAAAGCGCAGGGTTTCTTTTATGCCAATGCCTTTATTGA
ATATAACCGGATTAAGGCTATGAATTTATCCGAGGATGGCATCCTGGTGATAGATCTTGAGCAGCGTCGGTTGTTGATTC
AGGTCACTCAATTAGACGACCTGGAAAAGATTTACCACTTTTTTGTTGAAAATCAGTGA

Upstream 100 bases:

>100_bases
AAAGTTGCGACAACCCCTTCGGCACGCTCTCCCTAATAACTGGCTCTGCCAGCCGTCTGCCCGGGGAAACCCCCGGTTTT
TTTATTTGTGGAGTTGAAAG

Downstream 100 bases:

>100_bases
TTAAAAAACAATCTTAATCCTTCCATCGTGTTGCCCCGCGCTGTATGTGGATATTTAATCATCAGCGCACATGGCTACCT
GATGATTATTTACGCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSLTDGVLLIFTALMLVYAIYDEFGMNLLKGKTLLKVQLKRRNRIDCLIFVGLITILLYRNVTTQGAVITTYLLISLALI
AIYISYIRWPKMLFKAQGFFYANAFIEYNRIKAMNLSEDGILVIDLEQRRLLIQVTQLDDLEKIYHFFVENQ

Sequences:

>Translated_152_residues
MSLTDGVLLIFTALMLVYAIYDEFGMNLLKGKTLLKVQLKRRNRIDCLIFVGLITILLYRNVTTQGAVITTYLLISLALI
AIYISYIRWPKMLFKAQGFFYANAFIEYNRIKAMNLSEDGILVIDLEQRRLLIQVTQLDDLEKIYHFFVENQ
>Mature_151_residues
SLTDGVLLIFTALMLVYAIYDEFGMNLLKGKTLLKVQLKRRNRIDCLIFVGLITILLYRNVTTQGAVITTYLLISLALIA
IYISYIRWPKMLFKAQGFFYANAFIEYNRIKAMNLSEDGILVIDLEQRRLLIQVTQLDDLEKIYHFFVENQ

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family

Homologues:

Organism=Escherichia coli, GI1788123, Length=152, Percent_Identity=61.1842105263158, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2816_SERP5 (A8GFM7)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479045.1
- STRING:   A8GFM7
- GeneID:   5602621
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2816
- eggNOG:   COG4811
- HOGENOM:   HBG391110
- OMA:   RVRNIDN
- ProtClustDB:   PRK02913
- BioCyc:   SPRO399741:SPRO_2816-MONOMER
- HAMAP:   MF_01071
- InterPro:   IPR009328
- PIRSF:   PIRSF020687
- ProDom:   PD091196

Pfam domain/function: PF06173 DUF986

EC number: NA

Molecular weight: Translated: 17710; Mature: 17579

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2647f160)-; HASH(0x255d4ab0)-; HASH(0x25f62a30)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDGVLLIFTALMLVYAIYDEFGMNLLKGKTLLKVQLKRRNRIDCLIFVGLITILLYR
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHH
NVTTQGAVITTYLLISLALIAIYISYIRWPKMLFKAQGFFYANAFIEYNRIKAMNLSEDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHEEEEECCEEEECCCCCC
ILVIDLEQRRLLIQVTQLDDLEKIYHFFVENQ
EEEEEECCCEEEEEECCHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SLTDGVLLIFTALMLVYAIYDEFGMNLLKGKTLLKVQLKRRNRIDCLIFVGLITILLYR
CCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHH
NVTTQGAVITTYLLISLALIAIYISYIRWPKMLFKAQGFFYANAFIEYNRIKAMNLSEDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHEEEEECCEEEECCCCCC
ILVIDLEQRRLLIQVTQLDDLEKIYHFFVENQ
EEEEEECCCEEEEEECCHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA