| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is foxA [H]
Identifier: 157370976
GI number: 157370976
Start: 3013816
End: 3015933
Strand: Reverse
Name: foxA [H]
Synonym: Spro_2736
Alternate gene names: 157370976
Gene position: 3015933-3013816 (Counterclockwise)
Preceding gene: 157370977
Following gene: 157370974
Centisome position: 55.35
GC content: 54.01
Gene sequence:
>2118_bases ATGCAGATGATTTTTCCTGTCAAACGGTCGCGTGTTTTGTGTGCATTCGCGATGTTCCTGCCGTTGACTTCGTTGGCTGA AGACACCCTGGTGGTTAGCGCCAGGCCCGCTGATACTGCCGAGTCGGTGACTCAGGGCTACCAGGCGACCACCAGTCAGG GGGCGACTAAAACCAACCAGCCGCTGATCCTGACAGCGCAATCTGTTTCCGTGGTGACACGCCAACAAATGAGCGATCAG AATACCCAAACGGTTAACGATGCACTGAAATATACCCCGGGCGTTTTCACTAACTTCGCCGGCGGCGCGACACGCTATGA CACCATTGCATTACGCGGTTTCCACGGCGGTGATGTCAATAACACCTTCCTCGACGGCCTGCGCCTGTTAAGTGACGGCG GCACCTATAATGCCTTGCAGGTTGATCCCTGGTTCCTGGAGCGTATCGACGTCATCAAGGGGCCTTCTTCAGTGATGTAT GGGCAAAGCATTCCGGGCGGGCTGGTGGCCTTGACCACCAAGCGCCCGCAGTTTGCCACGCAGGGGCAGGTTAATCTTTC GGCGGGTAATAACAACACCCAGGGCGCGGCTTTCGATGTGACCGGTCCTTTGTCGGAGCAGTGGGCTTACCGGCTGACCG GAATGACGCGCAGCAGCGATACCATGTATGACCATCAGCGTGAAGAACGCTATGCAATTTCGCCGTCATTGCTGTGGCAA CCAGATGAAAATACCTCACTGTTACTGAAAGCTTACCTGCAAAAGGATCCGTCCGGCGGTTATCACAGTGCAGTACCGGC AGATGGCAGTCTCTATTCCAGCGCGGGTGACAAACTGGGGCGCGGATTTTTTGATGGCGAGAGTAGTCGTAACGTCTTCA AACGTTGGGAGCAGATTTACAGCTACGCTTTCTCGCACAGCTTTAATGACGTTTGGTCATTCCGACAGAATGCCAGCTAT ACCCATTCTAACGTTGAACTGCAGCAGGTTTATCAGATTGGCTGGGATCAGGATCACCAGTTGCTGAACCGCTATTACAG CGGCTCGGCAACCTCACTGGATGCATTCGCCGTCGACAACCAACTGGAGGCCGACTTTGCTACCGGGCCGCTGGATCACA AAGTGATGCTGGGCCTGGATTACCAGCGTTTTCGTAATAACCTGTGGGATGAATCTGCCGGCGCCTCTCAATTGAACCCT TATACTGGTGTGTCGGGGGGCGCGGGACTGACCAATCTGACGCATACCGATTCCCGACGCCACTATGAACAGATGGGCGT TTATCTGCAGGATGAAATCAGCCTGCAGAACTGGTATCTGAATCTGTCTGGCCGTTTTGACCGTATAGAGGCAAAAAATA CGGTGCTCAACACCGGCACCAGCGATGAACGTCGTGACGACAACTTTAGCGGCCGTGCCTCGTTGCTGTATCGCTTTGAC AGCGGTTTCTCACCTTACGCCAGTTACAGCACGGCGGTGACGCCGGAAGCGCTGGCCGATCAAAACGGCCATATGCTGAA GCCGAGCACCAGCGAGCAGTACGAGGTGGGCCTGAAATATCAACCGCCGGGCAGTTCATCAATCTACAGCATGGCCCTGT ATGACCTGACGCAGAATGACGTCGCCAACCGGGTGGTGCAGCAAAGTTATTATCTGCCTGCCGGAAAAGTACATTCTCAG GGGATTGAACTGGAGGCTCGCAGCAAGTTAACCGAACATCTCGATCTGATAGCAGGCTACACCTACAACAAGGTGAAGTT TAAAGATGCAATTGACGGCAACAATGGCAATACGCCGTATCTGGCACCGGAGCAAATGGCTTCGCTGTGGGGCAAATATG CCACTGCCTACGGCGTGGATCTGGGGGCTGGGGTGCGTTATATCGGCAAACAGTGGGCGGATAACGAAAATACGCTACGT ATTCCTTCCGTGACGCTGGTGGATGCTTCGGTGCGGATGAATCTGGATCGCGTTAACCCATCGTTGAAAGGGGCTTATGT GCAGTTAAACGTGAATAACCTGACTGACCGAAAATATGTCGCGGCCTGTTATGGCACCGGTTATTGCTATTGGGGGGCAG AACGCTCCGTGCTGGCGACGGTAGGGTACGATTTTTAA
Upstream 100 bases:
>100_bases CATACAGCACACCGATAGATCTTTTGCACTCTTGTCAGCCAGCGCTGCTGATGGGGGCGGGTCAGGGGTGACTTAATGAT ACTTACCGGGGATTACAAAT
Downstream 100 bases:
>100_bases CGGAAGGCTCATGACTGCCCCGTCGCTCTTTGGCGGGGCGGTATCTCAAGCGTTAGAACAAGGAGAACATCAACACTACC GGCAGGCTCAATGGCCAGGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MQMIFPVKRSRVLCAFAMFLPLTSLAEDTLVVSARPADTAESVTQGYQATTSQGATKTNQPLILTAQSVSVVTRQQMSDQ NTQTVNDALKYTPGVFTNFAGGATRYDTIALRGFHGGDVNNTFLDGLRLLSDGGTYNALQVDPWFLERIDVIKGPSSVMY GQSIPGGLVALTTKRPQFATQGQVNLSAGNNNTQGAAFDVTGPLSEQWAYRLTGMTRSSDTMYDHQREERYAISPSLLWQ PDENTSLLLKAYLQKDPSGGYHSAVPADGSLYSSAGDKLGRGFFDGESSRNVFKRWEQIYSYAFSHSFNDVWSFRQNASY THSNVELQQVYQIGWDQDHQLLNRYYSGSATSLDAFAVDNQLEADFATGPLDHKVMLGLDYQRFRNNLWDESAGASQLNP YTGVSGGAGLTNLTHTDSRRHYEQMGVYLQDEISLQNWYLNLSGRFDRIEAKNTVLNTGTSDERRDDNFSGRASLLYRFD SGFSPYASYSTAVTPEALADQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSMALYDLTQNDVANRVVQQSYYLPAGKVHSQ GIELEARSKLTEHLDLIAGYTYNKVKFKDAIDGNNGNTPYLAPEQMASLWGKYATAYGVDLGAGVRYIGKQWADNENTLR IPSVTLVDASVRMNLDRVNPSLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVLATVGYDF
Sequences:
>Translated_705_residues MQMIFPVKRSRVLCAFAMFLPLTSLAEDTLVVSARPADTAESVTQGYQATTSQGATKTNQPLILTAQSVSVVTRQQMSDQ NTQTVNDALKYTPGVFTNFAGGATRYDTIALRGFHGGDVNNTFLDGLRLLSDGGTYNALQVDPWFLERIDVIKGPSSVMY GQSIPGGLVALTTKRPQFATQGQVNLSAGNNNTQGAAFDVTGPLSEQWAYRLTGMTRSSDTMYDHQREERYAISPSLLWQ PDENTSLLLKAYLQKDPSGGYHSAVPADGSLYSSAGDKLGRGFFDGESSRNVFKRWEQIYSYAFSHSFNDVWSFRQNASY THSNVELQQVYQIGWDQDHQLLNRYYSGSATSLDAFAVDNQLEADFATGPLDHKVMLGLDYQRFRNNLWDESAGASQLNP YTGVSGGAGLTNLTHTDSRRHYEQMGVYLQDEISLQNWYLNLSGRFDRIEAKNTVLNTGTSDERRDDNFSGRASLLYRFD SGFSPYASYSTAVTPEALADQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSMALYDLTQNDVANRVVQQSYYLPAGKVHSQ GIELEARSKLTEHLDLIAGYTYNKVKFKDAIDGNNGNTPYLAPEQMASLWGKYATAYGVDLGAGVRYIGKQWADNENTLR IPSVTLVDASVRMNLDRVNPSLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVLATVGYDF >Mature_705_residues MQMIFPVKRSRVLCAFAMFLPLTSLAEDTLVVSARPADTAESVTQGYQATTSQGATKTNQPLILTAQSVSVVTRQQMSDQ NTQTVNDALKYTPGVFTNFAGGATRYDTIALRGFHGGDVNNTFLDGLRLLSDGGTYNALQVDPWFLERIDVIKGPSSVMY GQSIPGGLVALTTKRPQFATQGQVNLSAGNNNTQGAAFDVTGPLSEQWAYRLTGMTRSSDTMYDHQREERYAISPSLLWQ PDENTSLLLKAYLQKDPSGGYHSAVPADGSLYSSAGDKLGRGFFDGESSRNVFKRWEQIYSYAFSHSFNDVWSFRQNASY THSNVELQQVYQIGWDQDHQLLNRYYSGSATSLDAFAVDNQLEADFATGPLDHKVMLGLDYQRFRNNLWDESAGASQLNP YTGVSGGAGLTNLTHTDSRRHYEQMGVYLQDEISLQNWYLNLSGRFDRIEAKNTVLNTGTSDERRDDNFSGRASLLYRFD SGFSPYASYSTAVTPEALADQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSMALYDLTQNDVANRVVQQSYYLPAGKVHSQ GIELEARSKLTEHLDLIAGYTYNKVKFKDAIDGNNGNTPYLAPEQMASLWGKYATAYGVDLGAGVRYIGKQWADNENTLR IPSVTLVDASVRMNLDRVNPSLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVLATVGYDF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=717, Percent_Identity=34.1701534170153, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1787024, Length=794, Percent_Identity=24.8110831234257, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1787344, Length=755, Percent_Identity=23.7086092715232, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790405, Length=149, Percent_Identity=30.8724832214765, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790743, Length=695, Percent_Identity=22.589928057554, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78081; Mature: 78081
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMIFPVKRSRVLCAFAMFLPLTSLAEDTLVVSARPADTAESVTQGYQATTSQGATKTNQ CCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHCCCCCCCCCC PLILTAQSVSVVTRQQMSDQNTQTVNDALKYTPGVFTNFAGGATRYDTIALRGFHGGDVN CEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEECCCCCCCC NTFLDGLRLLSDGGTYNALQVDPWFLERIDVIKGPSSVMYGQSIPGGLVALTTKRPQFAT HHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCC QGQVNLSAGNNNTQGAAFDVTGPLSEQWAYRLTGMTRSSDTMYDHQREERYAISPSLLWQ CCEEEEECCCCCCCCEEEEECCCCCHHHEEEEECCCCCCCCHHHHHHHHHEECCCCEEEC PDENTSLLLKAYLQKDPSGGYHSAVPADGSLYSSAGDKLGRGFFDGESSRNVFKRWEQIY CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHH SYAFSHSFNDVWSFRQNASYTHSNVELQQVYQIGWDQDHQLLNRYYSGSATSLDAFAVDN HHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECC QLEADFATGPLDHKVMLGLDYQRFRNNLWDESAGASQLNPYTGVSGGAGLTNLTHTDSRR CCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH HYEQMGVYLQDEISLQNWYLNLSGRFDRIEAKNTVLNTGTSDERRDDNFSGRASLLYRFD HHHHCCCEEEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEC SGFSPYASYSTAVTPEALADQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSMALYDLTQND CCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHH VANRVVQQSYYLPAGKVHSQGIELEARSKLTEHLDLIAGYTYNKVKFKDAIDGNNGNTPY HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC LAPEQMASLWGKYATAYGVDLGAGVRYIGKQWADNENTLRIPSVTLVDASVRMNLDRVNP CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCEEEEEECCEEEEHHHCCC SLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVLATVGYDF CCCCEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCC >Mature Secondary Structure MQMIFPVKRSRVLCAFAMFLPLTSLAEDTLVVSARPADTAESVTQGYQATTSQGATKTNQ CCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHCCCCCCCCCC PLILTAQSVSVVTRQQMSDQNTQTVNDALKYTPGVFTNFAGGATRYDTIALRGFHGGDVN CEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEECCCCCCCC NTFLDGLRLLSDGGTYNALQVDPWFLERIDVIKGPSSVMYGQSIPGGLVALTTKRPQFAT HHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCC QGQVNLSAGNNNTQGAAFDVTGPLSEQWAYRLTGMTRSSDTMYDHQREERYAISPSLLWQ CCEEEEECCCCCCCCEEEEECCCCCHHHEEEEECCCCCCCCHHHHHHHHHEECCCCEEEC PDENTSLLLKAYLQKDPSGGYHSAVPADGSLYSSAGDKLGRGFFDGESSRNVFKRWEQIY CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHH SYAFSHSFNDVWSFRQNASYTHSNVELQQVYQIGWDQDHQLLNRYYSGSATSLDAFAVDN HHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECC QLEADFATGPLDHKVMLGLDYQRFRNNLWDESAGASQLNPYTGVSGGAGLTNLTHTDSRR CCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH HYEQMGVYLQDEISLQNWYLNLSGRFDRIEAKNTVLNTGTSDERRDDNFSGRASLLYRFD HHHHCCCEEEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEC SGFSPYASYSTAVTPEALADQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSMALYDLTQND CCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHH VANRVVQQSYYLPAGKVHSQGIELEARSKLTEHLDLIAGYTYNKVKFKDAIDGNNGNTPY HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC LAPEQMASLWGKYATAYGVDLGAGVRYIGKQWADNENTLRIPSVTLVDASVRMNLDRVNP CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCEEEEEECCEEEEHHHCCC SLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVLATVGYDF CCCCEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1640832 [H]