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The map label for this gene is rssA [H]

Identifier: 157370951

GI number: 157370951

Start: 2987964

End: 2988869

Strand: Reverse

Name: rssA [H]

Synonym: Spro_2711

Alternate gene names: 157370951

Gene position: 2988869-2987964 (Counterclockwise)

Preceding gene: 157370957

Following gene: 157370950

Centisome position: 54.85

GC content: 53.75

Gene sequence:

>906_bases
ATGCGAAAAATTAAGGTTGGATTGGCATTGGGCGCGGGGGCGGCTAAAGGATGGGCACATATTGGCGTGATCAATGCACT
AAAGAAGTTGGGTGTTGAAGTCGATATAGTAGCCGGTTGTTCGGTTGGCGCATTGGTGGGGGCGGCTTTTGCCAGCCATC
GTCTGCCGGCCATGGAAACCTGGGTGCGTTCATTCAGCTATTGGGATGTGATCCGTTTGATGGATTTGTCCTGGCAACGC
GGTGGGTTGCTGCGCGGTGAGCGGGTGTTTAATGCGGTAGGGCAGTTGTTGAAGATCGATGATATCGCTGAGTGTTCATT
GAAGTTTGGTGCCGTGGCGACCAATCTGAGTACCGGACGGGAACTGTGGCTGACCGAAGGTGACATTCATCAGGCGGTGC
GAGCCTCATGCAGCATGCCCGGCCTGTTGGCTCCGGTGTGGTTTGACGGCTATTGGCTGGTGGACGGCGCTGTGGTGAAT
CCGGTACCTATCTCATTGACCCGGGCGTTGGGAGCCGACATCGTTATCGCCGTTGACTTGCAACATGATGCCCATCTGAT
GCAGCAGGACTTGTTCTCGGTACGCAGTCCGGATATGGACGCGGCAAAAGACCTCCCCGCCCGTAACTGGCGAGGACGAT
TAAGGGAACGCATCAGCAAAATGACCACCAGAAAGCCTAATTTCACGCCAACGGCGATGGAAATTATGGGGACTTCTATT
CAGGTGCTGGAAAATAGATTGAAACGCAACCGCATGGCGGGCGATCCGCCTGATGTGTTGATCCAACCCTATTGCCCGCA
GATTTCAACGTTGGATTTCCATCGTGCCGAAGAGGCGATTGAAGCCGGCAGGCTGGCGGTTGAAAAACAGCTGGATAAAC
TATTGCCCTTGATAAAAAACAGATAA

Upstream 100 bases:

>100_bases
CCGAAAGTAATTTAGCGCATATGTTACCTAACAACATTCGACCCTGACAATCTACGCTGACGGCAGGATCGAAGCAATTC
ACCGAAAAAGGACCGGAACT

Downstream 100 bases:

>100_bases
TTTACGGTTCTTGACTGTATAACCTGCGATGGGAGCAATTTCCGACAGGCATAAAAGGTCTTTTTGAGCCACTATTACAT
TATGAAAAGGGAAGAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRKIKVGLALGAGAAKGWAHIGVINALKKLGVEVDIVAGCSVGALVGAAFASHRLPAMETWVRSFSYWDVIRLMDLSWQR
GGLLRGERVFNAVGQLLKIDDIAECSLKFGAVATNLSTGRELWLTEGDIHQAVRASCSMPGLLAPVWFDGYWLVDGAVVN
PVPISLTRALGADIVIAVDLQHDAHLMQQDLFSVRSPDMDAAKDLPARNWRGRLRERISKMTTRKPNFTPTAMEIMGTSI
QVLENRLKRNRMAGDPPDVLIQPYCPQISTLDFHRAEEAIEAGRLAVEKQLDKLLPLIKNR

Sequences:

>Translated_301_residues
MRKIKVGLALGAGAAKGWAHIGVINALKKLGVEVDIVAGCSVGALVGAAFASHRLPAMETWVRSFSYWDVIRLMDLSWQR
GGLLRGERVFNAVGQLLKIDDIAECSLKFGAVATNLSTGRELWLTEGDIHQAVRASCSMPGLLAPVWFDGYWLVDGAVVN
PVPISLTRALGADIVIAVDLQHDAHLMQQDLFSVRSPDMDAAKDLPARNWRGRLRERISKMTTRKPNFTPTAMEIMGTSI
QVLENRLKRNRMAGDPPDVLIQPYCPQISTLDFHRAEEAIEAGRLAVEKQLDKLLPLIKNR
>Mature_301_residues
MRKIKVGLALGAGAAKGWAHIGVINALKKLGVEVDIVAGCSVGALVGAAFASHRLPAMETWVRSFSYWDVIRLMDLSWQR
GGLLRGERVFNAVGQLLKIDDIAECSLKFGAVATNLSTGRELWLTEGDIHQAVRASCSMPGLLAPVWFDGYWLVDGAVVN
PVPISLTRALGADIVIAVDLQHDAHLMQQDLFSVRSPDMDAAKDLPARNWRGRLRERISKMTTRKPNFTPTAMEIMGTSI
QVLENRLKRNRMAGDPPDVLIQPYCPQISTLDFHRAEEAIEAGRLAVEKQLDKLLPLIKNR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=30.6010928961749, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=30.6010928961749, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=30.6010928961749, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=30.6010928961749, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=30.6010928961749, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI148727290, Length=182, Percent_Identity=29.6703296703297, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148727335, Length=182, Percent_Identity=29.6703296703297, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI226510936, Length=302, Percent_Identity=71.8543046357616, Blast_Score=454, Evalue=1e-129,
Organism=Caenorhabditis elegans, GI193204778, Length=166, Percent_Identity=33.1325301204819, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71997299, Length=168, Percent_Identity=32.1428571428571, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71997289, Length=168, Percent_Identity=32.1428571428571, Blast_Score=75, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=302, Percent_Identity=27.1523178807947, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281376913, Length=190, Percent_Identity=31.0526315789474, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571388, Length=190, Percent_Identity=31.0526315789474, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33152; Mature: 33152

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIKVGLALGAGAAKGWAHIGVINALKKLGVEVDIVAGCSVGALVGAAFASHRLPAMET
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCHHHH
WVRSFSYWDVIRLMDLSWQRGGLLRGERVFNAVGQLLKIDDIAECSLKFGAVATNLSTGR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCC
ELWLTEGDIHQAVRASCSMPGLLAPVWFDGYWLVDGAVVNPVPISLTRALGADIVIAVDL
EEEEECCHHHHHHHHHCCCCCCCCHHEECCEEEECCEEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLFSVRSPDMDAAKDLPARNWRGRLRERISKMTTRKPNFTPTAMEIMGTSI
CHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHH
QVLENRLKRNRMAGDPPDVLIQPYCPQISTLDFHRAEEAIEAGRLAVEKQLDKLLPLIKN
HHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure
MRKIKVGLALGAGAAKGWAHIGVINALKKLGVEVDIVAGCSVGALVGAAFASHRLPAMET
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCHHHH
WVRSFSYWDVIRLMDLSWQRGGLLRGERVFNAVGQLLKIDDIAECSLKFGAVATNLSTGR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCC
ELWLTEGDIHQAVRASCSMPGLLAPVWFDGYWLVDGAVVNPVPISLTRALGADIVIAVDL
EEEEECCHHHHHHHHHCCCCCCCCHHEECCEEEECCEEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLFSVRSPDMDAAKDLPARNWRGRLRERISKMTTRKPNFTPTAMEIMGTSI
CHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHH
QVLENRLKRNRMAGDPPDVLIQPYCPQISTLDFHRAEEAIEAGRLAVEKQLDKLLPLIKN
HHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]