| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hnr [H]
Identifier: 157370950
GI number: 157370950
Start: 2986845
End: 2987858
Strand: Reverse
Name: hnr [H]
Synonym: Spro_2710
Alternate gene names: 157370950
Gene position: 2987858-2986845 (Counterclockwise)
Preceding gene: 157370951
Following gene: 157370949
Centisome position: 54.83
GC content: 50.79
Gene sequence:
>1014_bases ATGGCATTACCATTGACTCACAAGCGCATTTTGGTCGTTGAGGACGAACTGGTTTTTCGTTCCGTGCTTGTTGGCTATTT GAAATCGTTGGGGGCGGAAACCAGTGAGGCCCCCAATGGTTTGCAGGCGTTGAGTCTGGTGGATGATGTTCATCCCGATT TAATCCTGTGCGATCTGGCGATGCCGGAAATGGATGGGATTGAGTTTGTCGAACATCTGCGGCTGCAAGGAGTGCAAACT CCGGTGTTGGTGATTTCGGCTACCGATAAAATGGCCGATATCGCCAAAATGTTGCGGTTAGGCGTTCAGGACGTATTGTT AAAACCGGTGACCGACCTTAATCGTCTGCGTGAAGCGGTGTTGGGGTGTCTGTATCCCAATATGTTCACTTCGCCGGCCA TTGAGGAGGTGGAACTGTTCCAGGACTGGGATGCGCTGAGTAAAAATCCTTCCGAAGCGGTGAAGTTGCTCAAACAGTTA CAGCCACCGGTGCAGCAGACCGTGGCTCATTGCCGGATTAATTATCGGCAATTAACCACTAGCGAGAATCCGGGACTGGT GCTGGATATTGCGGCACTGTCGGATAAAGACCTGGCGTTCTATTGTCTGGATGTGACCCGCGCAGGAGATAATGGCGTAT TGGCGGCACTGCTGCTGCGCGCATTATTTAATGGATTGTTGCAAGATCATTTAGCTAATCAGCGTCATCGGCTGCCGCAA ATGAGCGCATTGTTAAAGCAGGTTAATCAATTATTACGTCAAGGCAAGCTGGAAGGGCAATTTCCGATGCTGGTCGGTTA TTATCACACCGAATATAAAAACCTGATCCTGGTCTCCGCCGGCCTGCATGCCAATGTAAATACCGGTGATAATCAAATTC AACTGAGCAACGGTGTGCCACTGGGAACGCTGGGTGCGACGTACATGAATCAAATCAGTCAGCACTGTGCCGCCTGGCAG TGCCAGGTTTGGGGCTCGGGTGGCAGGCTACGCTTGATGCTCAGTGCTGAATAA
Upstream 100 bases:
>100_bases GGTTCTTGACTGTATAACCTGCGATGGGAGCAATTTCCGACAGGCATAAAAGGTCTTTTTGAGCCACTATTACATTATGA AAAGGGAAGAGGCTCGGCTG
Downstream 100 bases:
>100_bases TCCTCCTGGGTCAAAATAGTATTTGAAATTTATATATTTGAGATGCTTATTTTTACCTCAGTCTGTCCATTGGGTAATTG TCCTAAAGTTTTTCTATTTG
Product: response regulator of RpoS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MALPLTHKRILVVEDELVFRSVLVGYLKSLGAETSEAPNGLQALSLVDDVHPDLILCDLAMPEMDGIEFVEHLRLQGVQT PVLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAVLGCLYPNMFTSPAIEEVELFQDWDALSKNPSEAVKLLKQL QPPVQQTVAHCRINYRQLTTSENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRHRLPQ MSALLKQVNQLLRQGKLEGQFPMLVGYYHTEYKNLILVSAGLHANVNTGDNQIQLSNGVPLGTLGATYMNQISQHCAAWQ CQVWGSGGRLRLMLSAE
Sequences:
>Translated_337_residues MALPLTHKRILVVEDELVFRSVLVGYLKSLGAETSEAPNGLQALSLVDDVHPDLILCDLAMPEMDGIEFVEHLRLQGVQT PVLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAVLGCLYPNMFTSPAIEEVELFQDWDALSKNPSEAVKLLKQL QPPVQQTVAHCRINYRQLTTSENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRHRLPQ MSALLKQVNQLLRQGKLEGQFPMLVGYYHTEYKNLILVSAGLHANVNTGDNQIQLSNGVPLGTLGATYMNQISQHCAAWQ CQVWGSGGRLRLMLSAE >Mature_336_residues ALPLTHKRILVVEDELVFRSVLVGYLKSLGAETSEAPNGLQALSLVDDVHPDLILCDLAMPEMDGIEFVEHLRLQGVQTP VLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAVLGCLYPNMFTSPAIEEVELFQDWDALSKNPSEAVKLLKQLQ PPVQQTVAHCRINYRQLTTSENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRHRLPQM SALLKQVNQLLRQGKLEGQFPMLVGYYHTEYKNLILVSAGLHANVNTGDNQIQLSNGVPLGTLGATYMNQISQHCAAWQC QVWGSGGRLRLMLSAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=337, Percent_Identity=68.8427299703264, Blast_Score=467, Evalue=1e-133, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=40.7407407407407, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI145693157, Length=118, Percent_Identity=34.7457627118644, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1790437, Length=210, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786599, Length=106, Percent_Identity=33.0188679245283, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 37192; Mature: 37061
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLTHKRILVVEDELVFRSVLVGYLKSLGAETSEAPNGLQALSLVDDVHPDLILCDLA CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC MPEMDGIEFVEHLRLQGVQTPVLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAV CCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHH LGCLYPNMFTSPAIEEVELFQDWDALSKNPSEAVKLLKQLQPPVQQTVAHCRINYRQLTT HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEEC SENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRHRLPQ CCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH MSALLKQVNQLLRQGKLEGQFPMLVGYYHTEYKNLILVSAGLHANVNTGDNQIQLSNGVP HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCEECCCCCCCEEEECCCCC LGTLGATYMNQISQHCAAWQCQVWGSGGRLRLMLSAE CHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEECC >Mature Secondary Structure ALPLTHKRILVVEDELVFRSVLVGYLKSLGAETSEAPNGLQALSLVDDVHPDLILCDLA CCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC MPEMDGIEFVEHLRLQGVQTPVLVISATDKMADIAKMLRLGVQDVLLKPVTDLNRLREAV CCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHH LGCLYPNMFTSPAIEEVELFQDWDALSKNPSEAVKLLKQLQPPVQQTVAHCRINYRQLTT HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEEC SENPGLVLDIAALSDKDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQDHLANQRHRLPQ CCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH MSALLKQVNQLLRQGKLEGQFPMLVGYYHTEYKNLILVSAGLHANVNTGDNQIQLSNGVP HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCEECCCCCCCEEEECCCCC LGTLGATYMNQISQHCAAWQCQVWGSGGRLRLMLSAE CHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]