| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ycjX [H]
Identifier: 157370859
GI number: 157370859
Start: 2883131
End: 2884528
Strand: Reverse
Name: ycjX [H]
Synonym: Spro_2619
Alternate gene names: 157370859
Gene position: 2884528-2883131 (Counterclockwise)
Preceding gene: 157370861
Following gene: 157370858
Centisome position: 52.94
GC content: 58.01
Gene sequence:
>1398_bases ATGAAACGACTGCAAAATGAGTTAACGTCGCTGGTCAACCGCGGGATGGATCGCCACCTGCGTCTGGCGGTGACCGGCCT GAGCCGCAGCGGCAAAACCGCCTTTATCACCGCTTTCGTCAATCAATTGCTGCATGTTCACAGCGGTGCCCGCATGCCGC TGTTCTCGCCGGTGCGCGAAGAACGCCTGCTGGGCGTGAAGCGCATTCCGCAACGCGACCTCGGTATTCAGCGTTTTACC TATGATGAAGGGCTGGCACAGCTTTATGGCACTCCGCCGAACTGGCCGACTCCGACGCGTGGCGTCAGCGAAATTCGCCT GGCGTTGCGTTATCGCTCCAACGATTCATTGCTGCGTCATTTCAAAGACACTTCAACGCTGTATCTGGAGATTGTCGATT ATCCCGGCGAATGGTTGTTGGACTTGCCGATGCTGGAACAGGACTATCTGGCCTGGTCGCGGCAAATGGCCGGCTTACTG CAGGGCGATCGCGCCGAATGGGCCAGGCCCTGGCTGGAACTGTGCAAAAGCTGCGATCCGCTGGCACCCGCCGATGAAAA CAAGCTGGCGGCCATCGCCCAGGCCTATACCGATTATCTGTTGCGCTGCAAAAGTGAAGGGCTGCATTTTATTCAGCCGG GTCGCTTCGTGCTGCCGGGCGATCTGGCCGGTGCGCCGGCATTGCAGTTTTTCCCGTGGCCAAACGTCGACAGCCTTGGC GAGTCAAAGCTGGCGCAGGCGGATAAACACAGCAACATCGGCATGCTGCGTGCGCGTTTCAACTATTACTGCCAGACCAT CGTCAAAAACTTTTATAAAGAGCATTTTGTCCGTTTCGATCGCCAGATTGTGCTGGTGGATTGCCTGCAGCCACTCAATA GCGGCCCGCAGGCGTTCAATGACATGCGGCTGGCGCTGACCCAACTGATGCAGAGTTTCCACTATGGCAAGCGCACGCTG TTCCGCCGTTTATTTTCACCGACCATCGATAAACTGATGTTTGCCGCTACCAAGGCCGATCACATCACCGCCGATCAGCA CGCCAATTTGGTGTCGTTGTTGCAGCAGCTGGTGCAGGAAGCCTGGCAGAACGCGGCGTTTGAGGGCATCAGCATGGACT GCGTCGGGCTGGCCTCGGTGCAGGCGACCGAAAGCGGCATCGTTGACCATCAGGGGCAGCGCATCCCGGCGCTGAAAGGC AATCGCCTGAACGACGGCGCACCGTTGACGGTGTTCCCCGGCGAAGTGCCGGCACGTTTGCCGGGGCCAGCGTTCTGGCA GAATCAGGGCTTCCATTTTGATGAGTTCCGTCCACGCGCGATGAGTGTGGACAGTCCATTGCCGCATATCCGCCTGGACG CGGTGATGGAGTTTTTACTGGGAGATAAATTGCGATGA
Upstream 100 bases:
>100_bases GCTTCGCTTATGACTATAATAATGAGCATAGGTGCCAAAAAATGATGATTTTTGTTTAATTGTCTGTTTTTTATGATAAA AGGAAGTAATTTCACGTAAA
Downstream 100 bases:
>100_bases GCGAGCCGATAAAACCGCGTATCGATTTCGAACAGCCGTTGGAGCCGCCGCAGGAGCCGGTGCTGCGTGCCAACGTTGCT TTCGACGAACAGCAGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKRLQNELTSLVNRGMDRHLRLAVTGLSRSGKTAFITAFVNQLLHVHSGARMPLFSPVREERLLGVKRIPQRDLGIQRFT YDEGLAQLYGTPPNWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLEQDYLAWSRQMAGLL QGDRAEWARPWLELCKSCDPLAPADENKLAAIAQAYTDYLLRCKSEGLHFIQPGRFVLPGDLAGAPALQFFPWPNVDSLG ESKLAQADKHSNIGMLRARFNYYCQTIVKNFYKEHFVRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGKRTL FRRLFSPTIDKLMFAATKADHITADQHANLVSLLQQLVQEAWQNAAFEGISMDCVGLASVQATESGIVDHQGQRIPALKG NRLNDGAPLTVFPGEVPARLPGPAFWQNQGFHFDEFRPRAMSVDSPLPHIRLDAVMEFLLGDKLR
Sequences:
>Translated_465_residues MKRLQNELTSLVNRGMDRHLRLAVTGLSRSGKTAFITAFVNQLLHVHSGARMPLFSPVREERLLGVKRIPQRDLGIQRFT YDEGLAQLYGTPPNWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLEQDYLAWSRQMAGLL QGDRAEWARPWLELCKSCDPLAPADENKLAAIAQAYTDYLLRCKSEGLHFIQPGRFVLPGDLAGAPALQFFPWPNVDSLG ESKLAQADKHSNIGMLRARFNYYCQTIVKNFYKEHFVRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGKRTL FRRLFSPTIDKLMFAATKADHITADQHANLVSLLQQLVQEAWQNAAFEGISMDCVGLASVQATESGIVDHQGQRIPALKG NRLNDGAPLTVFPGEVPARLPGPAFWQNQGFHFDEFRPRAMSVDSPLPHIRLDAVMEFLLGDKLR >Mature_465_residues MKRLQNELTSLVNRGMDRHLRLAVTGLSRSGKTAFITAFVNQLLHVHSGARMPLFSPVREERLLGVKRIPQRDLGIQRFT YDEGLAQLYGTPPNWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLEQDYLAWSRQMAGLL QGDRAEWARPWLELCKSCDPLAPADENKLAAIAQAYTDYLLRCKSEGLHFIQPGRFVLPGDLAGAPALQFFPWPNVDSLG ESKLAQADKHSNIGMLRARFNYYCQTIVKNFYKEHFVRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGKRTL FRRLFSPTIDKLMFAATKADHITADQHANLVSLLQQLVQEAWQNAAFEGISMDCVGLASVQATESGIVDHQGQRIPALKG NRLNDGAPLTVFPGEVPARLPGPAFWQNQGFHFDEFRPRAMSVDSPLPHIRLDAVMEFLLGDKLR
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=81.7204301075269, Blast_Score=809, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 52729; Mature: 52729
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLQNELTSLVNRGMDRHLRLAVTGLSRSGKTAFITAFVNQLLHVHSGARMPLFSPVRE CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH ERLLGVKRIPQRDLGIQRFTYDEGLAQLYGTPPNWPTPTRGVSEIRLALRYRSNDSLLRH HHHHHHHHCCCHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLEQDYLAWSRQMAGLLQGDRAEWARPWLELCKSCDP HCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LAPADENKLAAIAQAYTDYLLRCKSEGLHFIQPGRFVLPGDLAGAPALQFFPWPNVDSLG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCCC ESKLAQADKHSNIGMLRARFNYYCQTIVKNFYKEHFVRFDRQIVLVDCLQPLNSGPQAFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGKRTLFRRLFSPTIDKLMFAATKADHITADQHANLVSLLQQLVQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHH AWQNAAFEGISMDCVGLASVQATESGIVDHQGQRIPALKGNRLNDGAPLTVFPGEVPARL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGPAFWQNQGFHFDEFRPRAMSVDSPLPHIRLDAVMEFLLGDKLR CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLQNELTSLVNRGMDRHLRLAVTGLSRSGKTAFITAFVNQLLHVHSGARMPLFSPVRE CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH ERLLGVKRIPQRDLGIQRFTYDEGLAQLYGTPPNWPTPTRGVSEIRLALRYRSNDSLLRH HHHHHHHHCCCHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLEQDYLAWSRQMAGLLQGDRAEWARPWLELCKSCDP HCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LAPADENKLAAIAQAYTDYLLRCKSEGLHFIQPGRFVLPGDLAGAPALQFFPWPNVDSLG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCEEECCCCCCCCCC ESKLAQADKHSNIGMLRARFNYYCQTIVKNFYKEHFVRFDRQIVLVDCLQPLNSGPQAFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGKRTLFRRLFSPTIDKLMFAATKADHITADQHANLVSLLQQLVQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHH AWQNAAFEGISMDCVGLASVQATESGIVDHQGQRIPALKGNRLNDGAPLTVFPGEVPARL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGPAFWQNQGFHFDEFRPRAMSVDSPLPHIRLDAVMEFLLGDKLR CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]