Click here to switch to the map view.

The map label for this gene is ydbH [H]

Identifier: 157370839

GI number: 157370839

Start: 2858780

End: 2861392

Strand: Reverse

Name: ydbH [H]

Synonym: Spro_2599

Alternate gene names: 157370839

Gene position: 2861392-2858780 (Counterclockwise)

Preceding gene: 157370842

Following gene: 157370838

Centisome position: 52.51

GC content: 57.98

Gene sequence:

>2613_bases
ATGACTAAGCGATTGAAAGTATTCATAGGGATTGTGGTGAGTGTGCTGATCCTGCTGGTGGCGCTGTGGCAAACTCTGCC
GCGCTGGCTGCCGCGTGTGCTCTCGCACTGGTTACCGCAGGGCAGCCAGTTGGTTTTGCAGGGCAAACTACAGTGGCACC
AGGGCGCCTTGCAGTTGGATGGCGCCCGCTTTTTAGCGCAAGACTGCCTGCTTGCCAGCGCCGGCCCAACCCGATTGGCT
TATCAGCAAGGGCGTTGGCAACTGATCGGCGACAAGCTGCATGTCGATACGGCCTGCCTATCAAAATTGCCTGCCGGTGA
TACCAATAGCGCCCCCCTGGCGCTTGACCAACTGCAAAAACAACTGCCGCTGCTGGATATCACCATTAAGGATCTCTCGG
TGCTGCCGTGGCAATTCTATGCCGGTAAACTGCAGATACACGCCACCGCAGAAGGCCAGAGCCTGCAATATCAAGGTCCC
AACGTCAGCGTTGACGCGCTGCTGGATCAACATCAACAACTGACGCTGAACAGCCTGACGCTCACCGCGCCCAACAGCCC
GCAGCCGCTGCATCTGACCGGAAAAATCAGCATTCCGCTGGATTTGGACAGCATGCCGACGCAAGGCGCACTGCAGGGCG
AACTGCAGACCGCTTATCTGGAAAAGCCTTTGCTGCTGGATATGCGCTGGCAACAGCAGCAGGGGGTGATGACGCTGACT
GAAAAGGGGGCAGATAAACCCTTGGCCACCTTGCCGTGGGAGATCAACCCGCAGCAGGTGAGTATCAAGCAGGGCGAGTG
GCGCTGGCCGTACAGTCAGCAACCGCTTAACGGCGGCTTGAGCATCGCGCTGCATGACTGGAGCAAAGGCTTTGATGAAG
CCCAGATCAGTGCCCGTTTAAATGTGATCACCGACGGCCACAACGGTAAGGGCAATGCGGTGTTGACGCTGGGGCCGGGT
AAGGTCGGGCTAATCGACAGCGACTTACGCTTCCAACTGACCGGTCAGGCGAATATGGCCGATTTTTCCATGACCGCTTC
CATCCCCGGCATCATCAGCGGCACTATTCTTAACCCGACGCTGGTGTTGCAGTCAGGGGCTCTGCTGCGTTTGTGGGGCA
ACGCCACACCGGAAATGAAACTGGAAGAGGCGCGGTTGCCGCTGGCCGGCGTGAAGGTCACCGCGGGCGGCATCACCGGC
CGCCTGCAGGCGATCATTAATGCCAGCGACAGCTATTGGGGCCGTTTTAAACTGCATCTGGACGGCAAGGCCCAGGATTT
TTGGCCGGATCACGGTAACTGGCAATGGCGCTATTGGGGTAACGGCCAGTTGCCGCCGCTACAGGCTGCCTGGGACGTCG
CCGGCAGCGGCAGTTGGCAGGACAGCACTTTGGTGCTCGATCGCCTTTCTACCGGTTTTGATCAATTGAAGTACAGCATG
GTGACGGTAGACGCACCGCGTCTCAGTCTTAGCCAACCGCTGCGTTGGCAGCGTGACCAGCAGGCCCCGGCATTCAATGG
CGAACTGCAGCTGGTTTCCGGCAAGGTTAGCTTCACCAACGGGGGTTACCTGCCGGCCCCGGTGCTGGCGCTGCAGCTCA
AGGGCAAGGCGCCGGACAGTTTCCAGCTACAGGGCAAACTGCAGGCGGAACAGATTGGGCCGATAGCACTGCGAGGCCGC
TGGGACGGTGAGCGTTTGCGCGGAGAGGGCTGGTGGCCAAAACAGTCGATGGAAGTGTTCCAACCCTTGATCTCACCCGA
TCTGAATATCAAACTGCGCGACGGCGAGTTTTATGCCCAGTCGGCCTTCTCTGCGGCCCGGGTACAGGGCTTTGAGGCCG
GTGGCCACTGGGTGGTGAAAAACGGCGGCATGTGGCTGAAAGACGGCGAGATGAGCGGCCTGGACTTTGTGATGTCCTAC
CGACTGAAAAACCATCTCTGGCAGTTGGGGGCCAAAAAGCCGGTGATGTTACGCATCAGGTCATTCAGCAACCTGTTTGA
AATGCAGAATATTACCGCCGATCTGCAGGGGACCTACCCGTACAGCGAACAGGCACCGCTGACGCTGAGCAACGTTGGAA
TGGATGCATTAAACGGTCATATCAGCCTGTCGGCGCTGCGGATGCCGCAGCATGACGCTGCCGTATTGAAACTGGATAAA
GTTGATCTCAGCGCCTTGTTTACCGCGCTGAAGCCAAAACAGTTTGCCATGTCCGGGCGGGTGGACGGCGAACTGCCGCT
GTATCTCAATCATCCCAAATGGCTGGTACGCAACGGTTGGATCGCCAACTCGGGCATGCTGACGCTGCGGCTGGACAAGG
ATATGGCCGATGCTATCGGCAGCAATAATCTGGCGACCGGCGCGGCGATCGACTGGCTGCGCTATATGGAGATTAACCGC
TCGAAAGCCAGGGTTGATCTCGACAACCTCGGTGAGCTGACGCTGAAGGCGCGCATTGACGGGGTTAATCCGCAAAAAAG
TACCAAACGAGAAGTTATCCTGAACTATAGCCATCAGGAAAACGTGTTTCAGCTGTGGCGCAGTCTGCGCTTTGGCGACA
ATTTACAGGAGTGGCTGGAACAGGCCCTCTCAAAACCTGGGGAACAACCATGA

Upstream 100 bases:

>100_bases
TGCCATCATTATTGCCAATTCAGGCATAGACTTAGCCTAAACCTAAACGGTCTTTGGCCCGGGCAAAGGGCGCCTAACTC
AGGAATGAAACAATCATTTA

Downstream 100 bases:

>100_bases
AAATCATCAGCGGGCCATTGCTGGTCGCCGTGCTGGGCACGTTTTTGCTGAGCGGCTGCGTGCCGCGCATCGAGGTCGCG
ACGCCTAAAGATCCGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 870; Mature: 869

Protein sequence:

>870_residues
MTKRLKVFIGIVVSVLILLVALWQTLPRWLPRVLSHWLPQGSQLVLQGKLQWHQGALQLDGARFLAQDCLLASAGPTRLA
YQQGRWQLIGDKLHVDTACLSKLPAGDTNSAPLALDQLQKQLPLLDITIKDLSVLPWQFYAGKLQIHATAEGQSLQYQGP
NVSVDALLDQHQQLTLNSLTLTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGELQTAYLEKPLLLDMRWQQQQGVMTLT
EKGADKPLATLPWEINPQQVSIKQGEWRWPYSQQPLNGGLSIALHDWSKGFDEAQISARLNVITDGHNGKGNAVLTLGPG
KVGLIDSDLRFQLTGQANMADFSMTASIPGIISGTILNPTLVLQSGALLRLWGNATPEMKLEEARLPLAGVKVTAGGITG
RLQAIINASDSYWGRFKLHLDGKAQDFWPDHGNWQWRYWGNGQLPPLQAAWDVAGSGSWQDSTLVLDRLSTGFDQLKYSM
VTVDAPRLSLSQPLRWQRDQQAPAFNGELQLVSGKVSFTNGGYLPAPVLALQLKGKAPDSFQLQGKLQAEQIGPIALRGR
WDGERLRGEGWWPKQSMEVFQPLISPDLNIKLRDGEFYAQSAFSAARVQGFEAGGHWVVKNGGMWLKDGEMSGLDFVMSY
RLKNHLWQLGAKKPVMLRIRSFSNLFEMQNITADLQGTYPYSEQAPLTLSNVGMDALNGHISLSALRMPQHDAAVLKLDK
VDLSALFTALKPKQFAMSGRVDGELPLYLNHPKWLVRNGWIANSGMLTLRLDKDMADAIGSNNLATGAAIDWLRYMEINR
SKARVDLDNLGELTLKARIDGVNPQKSTKREVILNYSHQENVFQLWRSLRFGDNLQEWLEQALSKPGEQP

Sequences:

>Translated_870_residues
MTKRLKVFIGIVVSVLILLVALWQTLPRWLPRVLSHWLPQGSQLVLQGKLQWHQGALQLDGARFLAQDCLLASAGPTRLA
YQQGRWQLIGDKLHVDTACLSKLPAGDTNSAPLALDQLQKQLPLLDITIKDLSVLPWQFYAGKLQIHATAEGQSLQYQGP
NVSVDALLDQHQQLTLNSLTLTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGELQTAYLEKPLLLDMRWQQQQGVMTLT
EKGADKPLATLPWEINPQQVSIKQGEWRWPYSQQPLNGGLSIALHDWSKGFDEAQISARLNVITDGHNGKGNAVLTLGPG
KVGLIDSDLRFQLTGQANMADFSMTASIPGIISGTILNPTLVLQSGALLRLWGNATPEMKLEEARLPLAGVKVTAGGITG
RLQAIINASDSYWGRFKLHLDGKAQDFWPDHGNWQWRYWGNGQLPPLQAAWDVAGSGSWQDSTLVLDRLSTGFDQLKYSM
VTVDAPRLSLSQPLRWQRDQQAPAFNGELQLVSGKVSFTNGGYLPAPVLALQLKGKAPDSFQLQGKLQAEQIGPIALRGR
WDGERLRGEGWWPKQSMEVFQPLISPDLNIKLRDGEFYAQSAFSAARVQGFEAGGHWVVKNGGMWLKDGEMSGLDFVMSY
RLKNHLWQLGAKKPVMLRIRSFSNLFEMQNITADLQGTYPYSEQAPLTLSNVGMDALNGHISLSALRMPQHDAAVLKLDK
VDLSALFTALKPKQFAMSGRVDGELPLYLNHPKWLVRNGWIANSGMLTLRLDKDMADAIGSNNLATGAAIDWLRYMEINR
SKARVDLDNLGELTLKARIDGVNPQKSTKREVILNYSHQENVFQLWRSLRFGDNLQEWLEQALSKPGEQP
>Mature_869_residues
TKRLKVFIGIVVSVLILLVALWQTLPRWLPRVLSHWLPQGSQLVLQGKLQWHQGALQLDGARFLAQDCLLASAGPTRLAY
QQGRWQLIGDKLHVDTACLSKLPAGDTNSAPLALDQLQKQLPLLDITIKDLSVLPWQFYAGKLQIHATAEGQSLQYQGPN
VSVDALLDQHQQLTLNSLTLTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGELQTAYLEKPLLLDMRWQQQQGVMTLTE
KGADKPLATLPWEINPQQVSIKQGEWRWPYSQQPLNGGLSIALHDWSKGFDEAQISARLNVITDGHNGKGNAVLTLGPGK
VGLIDSDLRFQLTGQANMADFSMTASIPGIISGTILNPTLVLQSGALLRLWGNATPEMKLEEARLPLAGVKVTAGGITGR
LQAIINASDSYWGRFKLHLDGKAQDFWPDHGNWQWRYWGNGQLPPLQAAWDVAGSGSWQDSTLVLDRLSTGFDQLKYSMV
TVDAPRLSLSQPLRWQRDQQAPAFNGELQLVSGKVSFTNGGYLPAPVLALQLKGKAPDSFQLQGKLQAEQIGPIALRGRW
DGERLRGEGWWPKQSMEVFQPLISPDLNIKLRDGEFYAQSAFSAARVQGFEAGGHWVVKNGGMWLKDGEMSGLDFVMSYR
LKNHLWQLGAKKPVMLRIRSFSNLFEMQNITADLQGTYPYSEQAPLTLSNVGMDALNGHISLSALRMPQHDAAVLKLDKV
DLSALFTALKPKQFAMSGRVDGELPLYLNHPKWLVRNGWIANSGMLTLRLDKDMADAIGSNNLATGAAIDWLRYMEINRS
KARVDLDNLGELTLKARIDGVNPQKSTKREVILNYSHQENVFQLWRSLRFGDNLQEWLEQALSKPGEQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787646, Length=846, Percent_Identity=47.0449172576832, Blast_Score=777, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021730 [H]

Pfam domain/function: PF11739 DctA-YdbH [H]

EC number: NA

Molecular weight: Translated: 96500; Mature: 96369

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLKVFIGIVVSVLILLVALWQTLPRWLPRVLSHWLPQGSQLVLQGKLQWHQGALQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEC
GARFLAQDCLLASAGPTRLAYQQGRWQLIGDKLHVDTACLSKLPAGDTNSAPLALDQLQK
CHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEECHHHHHHCCCCCCCCCCCHHHHHHH
QLPLLDITIKDLSVLPWQFYAGKLQIHATAEGQSLQYQGPNVSVDALLDQHQQLTLNSLT
HCCEEEEEECCCEECCEEEEECEEEEEEECCCCEEEECCCCEEHHHHHCCCCEEEEEEEE
LTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGELQTAYLEKPLLLDMRWQQQQGVMTLT
EECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEEE
EKGADKPLATLPWEINPQQVSIKQGEWRWPYSQQPLNGGLSIALHDWSKGFDEAQISARL
CCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
NVITDGHNGKGNAVLTLGPGKVGLIDSDLRFQLTGQANMADFSMTASIPGIISGTILNPT
EEEECCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEECCEECCE
LVLQSGALLRLWGNATPEMKLEEARLPLAGVKVTAGGITGRLQAIINASDSYWGRFKLHL
EEEECCCEEEEECCCCCCCEEHHCCCCEECEEEEECCCCEEEEEEEECCCCCCEEEEEEE
DGKAQDFWPDHGNWQWRYWGNGQLPPLQAAWDVAGSGSWQDSTLVLDRLSTGFDQLKYSM
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEHHHHCCHHHHEEEE
VTVDAPRLSLSQPLRWQRDQQAPAFNGELQLVSGKVSFTNGGYLPAPVLALQLKGKAPDS
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCC
FQLQGKLQAEQIGPIALRGRWDGERLRGEGWWPKQSMEVFQPLISPDLNIKLRDGEFYAQ
EEEECEEEHHHCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEHH
SAFSAARVQGFEAGGHWVVKNGGMWLKDGEMSGLDFVMSYRLKNHLWQLGAKKPVMLRIR
HHHHHHHHEEEECCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEH
SFSNLFEMQNITADLQGTYPYSEQAPLTLSNVGMDALNGHISLSALRMPQHDAAVLKLDK
HHHHHHHHHCCCEEECCCCCCCCCCCEEHHHCCHHHHCCEEEEEEEECCCCCCEEEEEEC
VDLSALFTALKPKQFAMSGRVDGELPLYLNHPKWLVRNGWIANSGMLTLRLDKDMADAIG
CCHHHHHHHCCCHHHEECCCCCCCCCEEECCCEEEEECCEEECCCEEEEEECCHHHHHCC
SNNLATGAAIDWLRYMEINRSKARVDLDNLGELTLKARIDGVNPQKSTKREVILNYSHQE
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCH
NVFQLWRSLRFGDNLQEWLEQALSKPGEQP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKRLKVFIGIVVSVLILLVALWQTLPRWLPRVLSHWLPQGSQLVLQGKLQWHQGALQLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEC
GARFLAQDCLLASAGPTRLAYQQGRWQLIGDKLHVDTACLSKLPAGDTNSAPLALDQLQK
CHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEECHHHHHHCCCCCCCCCCCHHHHHHH
QLPLLDITIKDLSVLPWQFYAGKLQIHATAEGQSLQYQGPNVSVDALLDQHQQLTLNSLT
HCCEEEEEECCCEECCEEEEECEEEEEEECCCCEEEECCCCEEHHHHHCCCCEEEEEEEE
LTAPNSPQPLHLTGKISIPLDLDSMPTQGALQGELQTAYLEKPLLLDMRWQQQQGVMTLT
EECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEEE
EKGADKPLATLPWEINPQQVSIKQGEWRWPYSQQPLNGGLSIALHDWSKGFDEAQISARL
CCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
NVITDGHNGKGNAVLTLGPGKVGLIDSDLRFQLTGQANMADFSMTASIPGIISGTILNPT
EEEECCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEECCEECCE
LVLQSGALLRLWGNATPEMKLEEARLPLAGVKVTAGGITGRLQAIINASDSYWGRFKLHL
EEEECCCEEEEECCCCCCCEEHHCCCCEECEEEEECCCCEEEEEEEECCCCCCEEEEEEE
DGKAQDFWPDHGNWQWRYWGNGQLPPLQAAWDVAGSGSWQDSTLVLDRLSTGFDQLKYSM
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEHHHHCCHHHHEEEE
VTVDAPRLSLSQPLRWQRDQQAPAFNGELQLVSGKVSFTNGGYLPAPVLALQLKGKAPDS
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCC
FQLQGKLQAEQIGPIALRGRWDGERLRGEGWWPKQSMEVFQPLISPDLNIKLRDGEFYAQ
EEEECEEEHHHCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEHH
SAFSAARVQGFEAGGHWVVKNGGMWLKDGEMSGLDFVMSYRLKNHLWQLGAKKPVMLRIR
HHHHHHHHEEEECCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEH
SFSNLFEMQNITADLQGTYPYSEQAPLTLSNVGMDALNGHISLSALRMPQHDAAVLKLDK
HHHHHHHHHCCCEEECCCCCCCCCCCEEHHHCCHHHHCCEEEEEEEECCCCCCEEEEEEC
VDLSALFTALKPKQFAMSGRVDGELPLYLNHPKWLVRNGWIANSGMLTLRLDKDMADAIG
CCHHHHHHHCCCHHHEECCCCCCCCCEEECCCEEEEECCEEECCCEEEEEECCHHHHHCC
SNNLATGAAIDWLRYMEINRSKARVDLDNLGELTLKARIDGVNPQKSTKREVILNYSHQE
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCH
NVFQLWRSLRFGDNLQEWLEQALSKPGEQP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9025293 [H]