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The map label for this gene is ygcU [H]

Identifier: 157370701

GI number: 157370701

Start: 2695427

End: 2696881

Strand: Reverse

Name: ygcU [H]

Synonym: Spro_2461

Alternate gene names: 157370701

Gene position: 2696881-2695427 (Counterclockwise)

Preceding gene: 157370702

Following gene: 157370699

Centisome position: 49.49

GC content: 52.37

Gene sequence:

>1455_bases
ATGTCTTTGCCTCGTGAAGCTATTGTCACTCATTTAAAAGAAATCGTTGGCCCGGCACGGGTTATTACTGATGAAGAAGT
ACTGAAAAAAAACAGCGTCGATCGTTTCCGGAAATATGCCGATATCCACGGCGTATTCACCCAGCCGTTACCTGCAGCGG
TCGTCAAGCTGGAGAATACCCAACAGGTGGCTGACGTATTGAAGTTTATGAACGAAAATCGCATCAACTGCGTGCCCCGT
ACCGGCGCGTCAGCCACCGAGGGTGGGCTGGAGACGGTGATAAAAAACTCGGTGGTGCTGGATGGCTCGGGATTGAACCA
GGTGGTCAGCATCGATATCCGCAATATGCAGGCCACGGCCCAGTGTGGTGTGCCGCTGGAAGTGCTGGAGAATCAATTGC
GCGCTCAGGGTTATACCACCGGGCATTCGCCACAGTCCAAGCCGCTGGCACAAATGGGCGGGCTGGTGGCAACCCGCAGC
ATCGGCCAACTGTCTACGTTATACGGGGCGATTGAAGATATGGTTGTGGGGTTGGAGGCGGTGTTCCCCAATGGCACCAT
TACCCGGATCAAAAATGTGCCGCGCCGTGCGGCCGGGCCAGATATTCGCCATGTGATCATCGGCAACGAAGGGGCGCTGT
GCTATATCACCGAAGTGACAGTCAAAATTTTCAAATATACGCCGGAAAACAACCTGTTTTATGGCTATACCCTCGACAAC
ATGCAAACCGGTTTCGACATCCTGCGTGAAGTGATGGTCGATGGCTACCGTCCATCCATCGCCCGACTCTATGATGCGGA
AGACGGCACTCAGCACTTTACTCATTTTGCCAAAGGGAAATGCGTGCTGATCTTTATGGCTGAAGGAGCCAAAGGCATTG
CGCAGGCGACCGGGGCAGGTATTGAGGCGATCGTACAACACCATGCTGAATGCCACAAAGTGGACAGTAAACTGATAGAA
GAGTGGTTCAATAATCTGAACTGGGGGCCGGAGAAGGTGGAGGCCGAACGCGTACAGATTATGAAAACCAATAATATGGG
ATTCACCACCGAGGTCTCTGGCGACTGGGCGAGTATCAATACCATCTATGAAAACGTGATCCAGCGGATACGTGCCGAAT
TCCCGCATGTCGCGGACATCACCATGCTGGGCGGCCACTCTTCCCACAGCTATATCAATGGCACCAATATGTACTTCGTT
TACGATTACAACGTGGTGGGCTGCAAGCCAGAGGAAGAGATCGACAAGTACCACAATCCGTTGAACAAGATTATCGTTGA
GGAAACGCTGAAGCAGGGAGGCTCTATGGTGCATCACCATGGTATCGGCAAGCATCGTACCCACTGGACCAAGGACGAGC
ACGGCAGCGCCTATTATATCCTGAAGGCGTTGAAAGAGGTCTACGATCCCAACGGCATTATGAACACCGGCACCATTTAT
CCGCTAGAGAAGTAA

Upstream 100 bases:

>100_bases
TGGTGGTCGATGGTGGTTATCTGGTTCGTTAAATAAACGGGGAAACCCGTTTTATCTCAGGAAACAAATTTCATATTCTT
ATTATCAGGAAGGAATAATC

Downstream 100 bases:

>100_bases
TCTTGCAACTGGCCCGGTAAACCGGGCCTTATCGTTATTCTATATGTGCACCAAAACCACCCCGGCCGGGGGCAATATCG
GGTTTCAGGGTTAATGCCGG

Product: alkylglycerone-phosphate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSLPREAIVTHLKEIVGPARVITDEEVLKKNSVDRFRKYADIHGVFTQPLPAAVVKLENTQQVADVLKFMNENRINCVPR
TGASATEGGLETVIKNSVVLDGSGLNQVVSIDIRNMQATAQCGVPLEVLENQLRAQGYTTGHSPQSKPLAQMGGLVATRS
IGQLSTLYGAIEDMVVGLEAVFPNGTITRIKNVPRRAAGPDIRHVIIGNEGALCYITEVTVKIFKYTPENNLFYGYTLDN
MQTGFDILREVMVDGYRPSIARLYDAEDGTQHFTHFAKGKCVLIFMAEGAKGIAQATGAGIEAIVQHHAECHKVDSKLIE
EWFNNLNWGPEKVEAERVQIMKTNNMGFTTEVSGDWASINTIYENVIQRIRAEFPHVADITMLGGHSSHSYINGTNMYFV
YDYNVVGCKPEEEIDKYHNPLNKIIVEETLKQGGSMVHHHGIGKHRTHWTKDEHGSAYYILKALKEVYDPNGIMNTGTIY
PLEK

Sequences:

>Translated_484_residues
MSLPREAIVTHLKEIVGPARVITDEEVLKKNSVDRFRKYADIHGVFTQPLPAAVVKLENTQQVADVLKFMNENRINCVPR
TGASATEGGLETVIKNSVVLDGSGLNQVVSIDIRNMQATAQCGVPLEVLENQLRAQGYTTGHSPQSKPLAQMGGLVATRS
IGQLSTLYGAIEDMVVGLEAVFPNGTITRIKNVPRRAAGPDIRHVIIGNEGALCYITEVTVKIFKYTPENNLFYGYTLDN
MQTGFDILREVMVDGYRPSIARLYDAEDGTQHFTHFAKGKCVLIFMAEGAKGIAQATGAGIEAIVQHHAECHKVDSKLIE
EWFNNLNWGPEKVEAERVQIMKTNNMGFTTEVSGDWASINTIYENVIQRIRAEFPHVADITMLGGHSSHSYINGTNMYFV
YDYNVVGCKPEEEIDKYHNPLNKIIVEETLKQGGSMVHHHGIGKHRTHWTKDEHGSAYYILKALKEVYDPNGIMNTGTIY
PLEK
>Mature_483_residues
SLPREAIVTHLKEIVGPARVITDEEVLKKNSVDRFRKYADIHGVFTQPLPAAVVKLENTQQVADVLKFMNENRINCVPRT
GASATEGGLETVIKNSVVLDGSGLNQVVSIDIRNMQATAQCGVPLEVLENQLRAQGYTTGHSPQSKPLAQMGGLVATRSI
GQLSTLYGAIEDMVVGLEAVFPNGTITRIKNVPRRAAGPDIRHVIIGNEGALCYITEVTVKIFKYTPENNLFYGYTLDNM
QTGFDILREVMVDGYRPSIARLYDAEDGTQHFTHFAKGKCVLIFMAEGAKGIAQATGAGIEAIVQHHAECHKVDSKLIEE
WFNNLNWGPEKVEAERVQIMKTNNMGFTTEVSGDWASINTIYENVIQRIRAEFPHVADITMLGGHSSHSYINGTNMYFVY
DYNVVGCKPEEEIDKYHNPLNKIIVEETLKQGGSMVHHHGIGKHRTHWTKDEHGSAYYILKALKEVYDPNGIMNTGTIYP
LEK

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=447, Percent_Identity=28.6353467561521, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI37595756, Length=493, Percent_Identity=21.501014198783, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI119964728, Length=209, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI48994907, Length=484, Percent_Identity=79.7520661157025, Blast_Score=819, Evalue=0.0,
Organism=Escherichia coli, GI1789351, Length=492, Percent_Identity=22.1544715447154, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17556096, Length=464, Percent_Identity=26.5086206896552, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI71992373, Length=498, Percent_Identity=24.4979919678715, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71992381, Length=495, Percent_Identity=25.0505050505051, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71992392, Length=351, Percent_Identity=25.3561253561254, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=200, Percent_Identity=27, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320027, Length=470, Percent_Identity=23.8297872340426, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320023, Length=202, Percent_Identity=26.2376237623762, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320764, Length=444, Percent_Identity=22.2972972972973, Blast_Score=73, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24653753, Length=232, Percent_Identity=32.7586206896552, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18921117, Length=215, Percent_Identity=28.8372093023256, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24639277, Length=215, Percent_Identity=28.8372093023256, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24639275, Length=215, Percent_Identity=28.8372093023256, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53756; Mature: 53625

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPREAIVTHLKEIVGPARVITDEEVLKKNSVDRFRKYADIHGVFTQPLPAAVVKLENT
CCCCHHHHHHHHHHHCCCHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEECCH
QQVADVLKFMNENRINCVPRTGASATEGGLETVIKNSVVLDGSGLNQVVSIDIRNMQATA
HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEEECCEEHH
QCGVPLEVLENQLRAQGYTTGHSPQSKPLAQMGGLVATRSIGQLSTLYGAIEDMVVGLEA
HCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFPNGTITRIKNVPRRAAGPDIRHVIIGNEGALCYITEVTVKIFKYTPENNLFYGYTLDN
CCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCC
MQTGFDILREVMVDGYRPSIARLYDAEDGTQHFTHFAKGKCVLIFMAEGAKGIAQATGAG
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHCCCH
IEAIVQHHAECHKVDSKLIEEWFNNLNWGPEKVEAERVQIMKTNNMGFTTEVSGDWASIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCEEEECCCCHHHHH
TIYENVIQRIRAEFPHVADITMLGGHSSHSYINGTNMYFVYDYNVVGCKPEEEIDKYHNP
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCEEEEEEEEEEECCCCHHHHHHHHCH
LNKIIVEETLKQGGSMVHHHGIGKHRTHWTKDEHGSAYYILKALKEVYDPNGIMNTGTIY
HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEE
PLEK
CCCC
>Mature Secondary Structure 
SLPREAIVTHLKEIVGPARVITDEEVLKKNSVDRFRKYADIHGVFTQPLPAAVVKLENT
CCCHHHHHHHHHHHCCCHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEECCH
QQVADVLKFMNENRINCVPRTGASATEGGLETVIKNSVVLDGSGLNQVVSIDIRNMQATA
HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEEECCEEHH
QCGVPLEVLENQLRAQGYTTGHSPQSKPLAQMGGLVATRSIGQLSTLYGAIEDMVVGLEA
HCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFPNGTITRIKNVPRRAAGPDIRHVIIGNEGALCYITEVTVKIFKYTPENNLFYGYTLDN
CCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCC
MQTGFDILREVMVDGYRPSIARLYDAEDGTQHFTHFAKGKCVLIFMAEGAKGIAQATGAG
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHCCCH
IEAIVQHHAECHKVDSKLIEEWFNNLNWGPEKVEAERVQIMKTNNMGFTTEVSGDWASIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCEEEECCCCHHHHH
TIYENVIQRIRAEFPHVADITMLGGHSSHSYINGTNMYFVYDYNVVGCKPEEEIDKYHNP
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCEEEEEEEEEEECCCCHHHHHHHHCH
LNKIIVEETLKQGGSMVHHHGIGKHRTHWTKDEHGSAYYILKALKEVYDPNGIMNTGTIY
HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEE
PLEK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]