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The map label for this gene is nahR [H]

Identifier: 157370657

GI number: 157370657

Start: 2646923

End: 2647843

Strand: Reverse

Name: nahR [H]

Synonym: Spro_2417

Alternate gene names: 157370657

Gene position: 2647843-2646923 (Counterclockwise)

Preceding gene: 157370658

Following gene: 157370655

Centisome position: 48.59

GC content: 57.0

Gene sequence:

>921_bases
ATGACAGATCCCGATCTTAATTTACTGATTGCTCTCGATGCCCTGCTTTCCCTGGGCAGCGTCGCGGGTGCTGCTCGCCG
TCTTAAATTAAGCGCCTCTGCGATGAGCCGCACGCTTAGCCGCCTGCGAGCGGTCACCGGCGATCCCTTATTGGTGCGCG
CTGGTCGCAAAATGGTGTTGACGCCCTATGCCGAAGAGATACGCGAGCGGACGCAAAACGCCGTGTTTGAAGCCCGTGCG
GTATTGCGCCCCTCGGTGTCAGAACTGAATTTAGCCACTCTGGAACGCACCTTTACCCTGCGCGCCAACGAGGGTTTTGT
CGAAGCCTTTGGCGCCGTGCTGATCGCAGCAGCAGCAAAGGAAGCCCCTTTGGTACGCCTGTGTTTTGCCCCCAAGCCAG
AGAAAAACTCCACCCATTTGCGCGAAGGATTGGTCGATCTTGAGATTGGCGTGCTGGGGGAAATGGGGCCGGAGATTCGA
TTACAGACCCTGTTCCGTGACCGATTTGTCGCGGTAGTCCGCAAAGGCCATCCGTTTGAGCAGCAGACCGAAATTACTGC
CCAACAGTATGCCGCCTGTGGTCATGTGGTTGCCTCGCGCCGTGGGCTATTAACCGGGCCAGTAGACCAAGCGTTGGCGG
AATTAGGACTGGAACGCAAGGTGGCCGCCGTAGTACCGAGTTTTCCCGCCGCGCTGGCGGTGGCTCAGGCCTCTGATTTA
GTGGCATTGGTCCCCGCCTCTTTCCTGATCAACCAACCGGTAGGCACCACACTTTATGCGTTTGAACTGCCGGTAAAAAC
ACAGGGCATTACCGTTTCGCAGATGTGGCATCCGCGTTTAGAAGCCGATCCAGCCCATCGTTGGCTGCGACAGTGGGTGT
TAGGCGTGGTTAAACAGCGTTTCGCGACGATAAATGATTGA

Upstream 100 bases:

>100_bases
CCACCTGCCCTGACCGGCAGCCAAAAGCCGATAGCCTTTACGGGTTATCGGCTTTTTTGCACCAGACGCCTTCCCTTATT
GCCTGCTCAGGATGCCCGAC

Downstream 100 bases:

>100_bases
GTTGTACTGAAAATTATTCATCGGTTCCGGGGGGGATTATTGATTTATTACTTAAGAATAAAGCCAGATTTAATAGTGCC
CACTATGCAGTACATTAAAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTDPDLNLLIALDALLSLGSVAGAARRLKLSASAMSRTLSRLRAVTGDPLLVRAGRKMVLTPYAEEIRERTQNAVFEARA
VLRPSVSELNLATLERTFTLRANEGFVEAFGAVLIAAAAKEAPLVRLCFAPKPEKNSTHLREGLVDLEIGVLGEMGPEIR
LQTLFRDRFVAVVRKGHPFEQQTEITAQQYAACGHVVASRRGLLTGPVDQALAELGLERKVAAVVPSFPAALAVAQASDL
VALVPASFLINQPVGTTLYAFELPVKTQGITVSQMWHPRLEADPAHRWLRQWVLGVVKQRFATIND

Sequences:

>Translated_306_residues
MTDPDLNLLIALDALLSLGSVAGAARRLKLSASAMSRTLSRLRAVTGDPLLVRAGRKMVLTPYAEEIRERTQNAVFEARA
VLRPSVSELNLATLERTFTLRANEGFVEAFGAVLIAAAAKEAPLVRLCFAPKPEKNSTHLREGLVDLEIGVLGEMGPEIR
LQTLFRDRFVAVVRKGHPFEQQTEITAQQYAACGHVVASRRGLLTGPVDQALAELGLERKVAAVVPSFPAALAVAQASDL
VALVPASFLINQPVGTTLYAFELPVKTQGITVSQMWHPRLEADPAHRWLRQWVLGVVKQRFATIND
>Mature_305_residues
TDPDLNLLIALDALLSLGSVAGAARRLKLSASAMSRTLSRLRAVTGDPLLVRAGRKMVLTPYAEEIRERTQNAVFEARAV
LRPSVSELNLATLERTFTLRANEGFVEAFGAVLIAAAAKEAPLVRLCFAPKPEKNSTHLREGLVDLEIGVLGEMGPEIRL
QTLFRDRFVAVVRKGHPFEQQTEITAQQYAACGHVVASRRGLLTGPVDQALAELGLERKVAAVVPSFPAALAVAQASDLV
ALVPASFLINQPVGTTLYAFELPVKTQGITVSQMWHPRLEADPAHRWLRQWVLGVVKQRFATIND

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=300, Percent_Identity=25, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33311; Mature: 33180

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPDLNLLIALDALLSLGSVAGAARRLKLSASAMSRTLSRLRAVTGDPLLVRAGRKMVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
TPYAEEIRERTQNAVFEARAVLRPSVSELNLATLERTFTLRANEGFVEAFGAVLIAAAAK
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHC
EAPLVRLCFAPKPEKNSTHLREGLVDLEIGVLGEMGPEIRLQTLFRDRFVAVVRKGHPFE
CCCEEEEEECCCCCCCCHHHHHCCHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH
QQTEITAQQYAACGHVVASRRGLLTGPVDQALAELGLERKVAAVVPSFPAALAVAQASDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCH
VALVPASFLINQPVGTTLYAFELPVKTQGITVSQMWHPRLEADPAHRWLRQWVLGVVKQR
HHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FATIND
HHCCCC
>Mature Secondary Structure 
TDPDLNLLIALDALLSLGSVAGAARRLKLSASAMSRTLSRLRAVTGDPLLVRAGRKMVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
TPYAEEIRERTQNAVFEARAVLRPSVSELNLATLERTFTLRANEGFVEAFGAVLIAAAAK
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHC
EAPLVRLCFAPKPEKNSTHLREGLVDLEIGVLGEMGPEIRLQTLFRDRFVAVVRKGHPFE
CCCEEEEEECCCCCCCCHHHHHCCHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH
QQTEITAQQYAACGHVVASRRGLLTGPVDQALAELGLERKVAAVVPSFPAALAVAQASDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCH
VALVPASFLINQPVGTTLYAFELPVKTQGITVSQMWHPRLEADPAHRWLRQWVLGVVKQR
HHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FATIND
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]