Click here to switch to the map view.

The map label for this gene is yjcB [H]

Identifier: 157370595

GI number: 157370595

Start: 2567798

End: 2568079

Strand: Reverse

Name: yjcB [H]

Synonym: Spro_2355

Alternate gene names: 157370595

Gene position: 2568079-2567798 (Counterclockwise)

Preceding gene: 157370598

Following gene: 157370593

Centisome position: 47.13

GC content: 55.32

Gene sequence:

>282_bases
ATGAGTGCCATTGCCACAGGTTTTATCATGATGCGCTGGGAGTTACTGAGCGCCGTTATGATGTTTATGTCCAGCCAGCT
AAACGTCGTTTGCCGCAAGACCAGCCGCAACGGCATGGCATTTATGTTCAGCAGCCTGGGGCTGTTCACCACCTGCTGGT
TCGTCATGGGCCTGATGGGCATCAGTTTCAGCCAGGAAGGCTTTACGCAGTTCTGGTCCCACGCCTGGGATATGTATGTC
GAAGTGGTCAGCAACACCCCCACCGACTGGCCACTGCCCTGA

Upstream 100 bases:

>100_bases
CGCGATTTATGCCGGGCTACAATGTGACGCAGATCACACTAATTCATTTTTGCCCGCACGGCCCCCCGCCGACTGCGGCT
TTTTCCAAGGACCATGTTCG

Downstream 100 bases:

>100_bases
GCCGCACTTAATCTCCCCCAACGGCAGGCAACGGCACCGACATCTCCAGCAGTATTTTGCAGAATGCCTGCGCAGCCGCG
CCAGGTTCAGCGCCGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSAIATGFIMMRWELLSAVMMFMSSQLNVVCRKTSRNGMAFMFSSLGLFTTCWFVMGLMGISFSQEGFTQFWSHAWDMYV
EVVSNTPTDWPLP

Sequences:

>Translated_93_residues
MSAIATGFIMMRWELLSAVMMFMSSQLNVVCRKTSRNGMAFMFSSLGLFTTCWFVMGLMGISFSQEGFTQFWSHAWDMYV
EVVSNTPTDWPLP
>Mature_92_residues
SAIATGFIMMRWELLSAVMMFMSSQLNVVCRKTSRNGMAFMFSSLGLFTTCWFVMGLMGISFSQEGFTQFWSHAWDMYVE
VVSNTPTDWPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082365, Length=92, Percent_Identity=40.2173913043478, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016958
- ProDom:   PD064934 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10645; Mature: 10513

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
11.8 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
10.9 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIATGFIMMRWELLSAVMMFMSSQLNVVCRKTSRNGMAFMFSSLGLFTTCWFVMGLMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
ISFSQEGFTQFWSHAWDMYVEVVSNTPTDWPLP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAIATGFIMMRWELLSAVMMFMSSQLNVVCRKTSRNGMAFMFSSLGLFTTCWFVMGLMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
ISFSQEGFTQFWSHAWDMYVEVVSNTPTDWPLP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]