Click here to switch to the map view.

The map label for this gene is oxdD [H]

Identifier: 157370562

GI number: 157370562

Start: 2534432

End: 2535601

Strand: Reverse

Name: oxdD [H]

Synonym: Spro_2322

Alternate gene names: 157370562

Gene position: 2535601-2534432 (Counterclockwise)

Preceding gene: 157370566

Following gene: 157370558

Centisome position: 46.53

GC content: 52.82

Gene sequence:

>1170_bases
ATGTTATCGCGTCGTGATATATTAAAAGCCTCTGCGGTCAGCGCAGCAGCAGCCAGCGTAATGGGCGGTATGCTTAAATC
CGCCAGCGCCGACGAACATCGTAATATTGTCCCGCCCAGTACTTTCCAACCCGCCGCCGATGCACAAGACCTTTATAAAT
ATGTCTTTGCCAACAGCAAAAAACGCAGCCTGCCCAGCGGGTGGGCCAGAGAGGCCACCGTCGAACAATTCCCGATTTCT
GAAGGCGTTGCCGGGGTGGATATGACGCTGGAACCGGGCGGTGTCCGCGAGCTGCACTGGCACGCCATTGCCGCCGAATG
GGCGTTTATGCTGGAAGGCCATGCCCGCATCACCATCATCGACCCGGAGGGCAAGTGTGAAGTGGCGGACTTCGGCGCAG
GGGACGTTTGGTATTTTCCCAAAGGTTACGGGCACTCGATCCAGGCGCTGGCGGACGGCGCGCACTTTGTTTTGACCTTT
GATAACGGCCATTTTTCCGAGTTTGGTACTTTCAGCATTACCGACTGGGTGGCACACATGCCCAAAGAGGTGTTGGAAAA
AAGCGTTAATATGCCGGCAGCGGTATTTTCCAAAGCCAAACAGGGTGAGGCCTATATTGTCGGCGGTGCGGTTCCCCCGG
CTCTTCCCCTGCCCAGCAACGACGGCGGTTTGAATAACTCTCCGTTGGCCCACCGTTATGAATTAATGAAGCAAAAACCT
TTTTTTGAAAATGATGCAGGCAGCGTTCATTTGGTATCGTCAAAAGAATTTCCCATTTCAACTACCATGACCGGCATTAT
CGAAATCGTTAAACCCGGTGCGGTGCGGGAATTGCACTGGCATCCCAACGCCAATGAGTGGCAATACTATATTTCCGGCA
AGGGCCGCATGACGGTATTCAGTTCACACGGCCATGCGCAGACCGCAGAATATGCACCGACAGACGTCGGTTATGTCCCG
CAGGGTTTTGGTCATTACATTGAGAATATGGGCGATGAGGATCTCAAAGTGCTAATCGTACTGGATAACGGTATTTATCA
GGATATTTCGCTGTCTGACTGGTTGGCGAAAACCCCGGCCTATCTGCTGGCAGATAACTTCAATAATCAGATTGCCGACT
GGCAAGATCGCCCCAGGGACAAACTGGTAATGTCCCGCCGTAAAAGCTGA

Upstream 100 bases:

>100_bases
GAGCATTTTAACGCGGCAATAACACACCTGCAGCCAATAAAACCAACAGATAAATCCTGCCGATTTTTTGGCAGGCATTC
TATATATTGGAGAAAGTTAT

Downstream 100 bases:

>100_bases
TGGGTAGCGAGGGGGCGTTAACCCCCTCGCCAAGGGTTACTGCTTACGCTGCTCCGCCACCTGTTTGGCGGTCACCTTGC
CTTGTTTTTCACCAAACTGG

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MLSRRDILKASAVSAAAASVMGGMLKSASADEHRNIVPPSTFQPAADAQDLYKYVFANSKKRSLPSGWAREATVEQFPIS
EGVAGVDMTLEPGGVRELHWHAIAAEWAFMLEGHARITIIDPEGKCEVADFGAGDVWYFPKGYGHSIQALADGAHFVLTF
DNGHFSEFGTFSITDWVAHMPKEVLEKSVNMPAAVFSKAKQGEAYIVGGAVPPALPLPSNDGGLNNSPLAHRYELMKQKP
FFENDAGSVHLVSSKEFPISTTMTGIIEIVKPGAVRELHWHPNANEWQYYISGKGRMTVFSSHGHAQTAEYAPTDVGYVP
QGFGHYIENMGDEDLKVLIVLDNGIYQDISLSDWLAKTPAYLLADNFNNQIADWQDRPRDKLVMSRRKS

Sequences:

>Translated_389_residues
MLSRRDILKASAVSAAAASVMGGMLKSASADEHRNIVPPSTFQPAADAQDLYKYVFANSKKRSLPSGWAREATVEQFPIS
EGVAGVDMTLEPGGVRELHWHAIAAEWAFMLEGHARITIIDPEGKCEVADFGAGDVWYFPKGYGHSIQALADGAHFVLTF
DNGHFSEFGTFSITDWVAHMPKEVLEKSVNMPAAVFSKAKQGEAYIVGGAVPPALPLPSNDGGLNNSPLAHRYELMKQKP
FFENDAGSVHLVSSKEFPISTTMTGIIEIVKPGAVRELHWHPNANEWQYYISGKGRMTVFSSHGHAQTAEYAPTDVGYVP
QGFGHYIENMGDEDLKVLIVLDNGIYQDISLSDWLAKTPAYLLADNFNNQIADWQDRPRDKLVMSRRKS
>Mature_389_residues
MLSRRDILKASAVSAAAASVMGGMLKSASADEHRNIVPPSTFQPAADAQDLYKYVFANSKKRSLPSGWAREATVEQFPIS
EGVAGVDMTLEPGGVRELHWHAIAAEWAFMLEGHARITIIDPEGKCEVADFGAGDVWYFPKGYGHSIQALADGAHFVLTF
DNGHFSEFGTFSITDWVAHMPKEVLEKSVNMPAAVFSKAKQGEAYIVGGAVPPALPLPSNDGGLNNSPLAHRYELMKQKP
FFENDAGSVHLVSSKEFPISTTMTGIIEIVKPGAVRELHWHPNANEWQYYISGKGRMTVFSSHGHAQTAEYAPTDVGYVP
QGFGHYIENMGDEDLKVLIVLDNGIYQDISLSDWLAKTPAYLLADNFNNQIADWQDRPRDKLVMSRRKS

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 42754; Mature: 42754

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRRDILKASAVSAAAASVMGGMLKSASADEHRNIVPPSTFQPAADAQDLYKYVFANSK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
KRSLPSGWAREATVEQFPISEGVAGVDMTLEPGGVRELHWHAIAAEWAFMLEGHARITII
CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHEEEECCCEEEEEE
DPEGKCEVADFGAGDVWYFPKGYGHSIQALADGAHFVLTFDNGHFSEFGTFSITDWVAHM
CCCCCEEEEECCCCCEEECCCCCCCCHHEECCCCEEEEEECCCCCCCCCCEEHHHHHHHC
PKEVLEKSVNMPAAVFSKAKQGEAYIVGGAVPPALPLPSNDGGLNNSPLAHRYELMKQKP
HHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
FFENDAGSVHLVSSKEFPISTTMTGIIEIVKPGAVRELHWHPNANEWQYYISGKGRMTVF
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEE
SSHGHAQTAEYAPTDVGYVPQGFGHYIENMGDEDLKVLIVLDNGIYQDISLSDWLAKTPA
ECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCC
YLLADNFNNQIADWQDRPRDKLVMSRRKS
EEEECCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLSRRDILKASAVSAAAASVMGGMLKSASADEHRNIVPPSTFQPAADAQDLYKYVFANSK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
KRSLPSGWAREATVEQFPISEGVAGVDMTLEPGGVRELHWHAIAAEWAFMLEGHARITII
CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHEEEECCCEEEEEE
DPEGKCEVADFGAGDVWYFPKGYGHSIQALADGAHFVLTFDNGHFSEFGTFSITDWVAHM
CCCCCEEEEECCCCCEEECCCCCCCCHHEECCCCEEEEEECCCCCCCCCCEEHHHHHHHC
PKEVLEKSVNMPAAVFSKAKQGEAYIVGGAVPPALPLPSNDGGLNNSPLAHRYELMKQKP
HHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
FFENDAGSVHLVSSKEFPISTTMTGIIEIVKPGAVRELHWHPNANEWQYYISGKGRMTVF
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEE
SSHGHAQTAEYAPTDVGYVPQGFGHYIENMGDEDLKVLIVLDNGIYQDISLSDWLAKTPA
ECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCC
YLLADNFNNQIADWQDRPRDKLVMSRRKS
EEEECCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]