| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is mchE [H]
Identifier: 157370556
GI number: 157370556
Start: 2525461
End: 2526756
Strand: Direct
Name: mchE [H]
Synonym: Spro_2316
Alternate gene names: 157370556
Gene position: 2525461-2526756 (Clockwise)
Preceding gene: 157370555
Following gene: 157370557
Centisome position: 46.35
GC content: 59.26
Gene sequence:
>1296_bases ATGACAGGACGTCCCCCCCAGCTTTACCGCGAGGGTTATTTTGCCGCTCAGGCCACCAGGGCCGAGGGGGAAGTGATTAT CCCCGCCAGCCTCAGTTTAACCGTCTATGCCTGGGTCAGCGTCCTGCTGGTGCTGGCCATCTTGCTATTCCTAATGTTGG GCGAATATACCCGCAAAGCGCGGCTGGAGGGGGTGGTTATGCCGTCCAGCGGGTTGATCAAGGTGGTAGCCCGCAGCGCC GGGCAGGTCACCGAAAGGCTGGTGGCGGAAGGGGCGGCGGTCAAGGCCGGTCAGGCGCTGTATCGGCTCAGCGGCGAATA TTTCAATGGGCAGGGCGTCGGTACGCTGGCGTCGGTTTCTGATTCATTAAATCGCCAATATCGCATGCTGGAGCACCAGC GCGCTCAAGAACTGGCAACCCGCGTTCTGCAGCAAACCGGCGTACGGCAACGCATCGCGCAGCTCAATCAGGAGCTGTCC AGCGCAGACGCGGCAATGCTGCTGGTTCAGCAACAGGCGAAACTTTCACATTCGTTGATGGAGCGCTACCGCAAACTGAT CGCCAAAGGCTATGTCTCCGAGCTGGAGTTTCAGCAGCAGCGAATGACGCTGTCGACGGCGCAGGAAAAGGTTGAACTCC AGCGACAGGCGCAGCTGCGGCTAAAACGCGAGCTTGCCGCGGCGGCCTCAGAGCTGCGGACCCTGGAACAACAACAGCAA GGGCGCGACGCCGAGCTTGAACGTCAGTTACAGGGCATTAAACAGCAGAAGATCGAACTGGGCGCCCAGCGCGATCATAC GTTGACCGCCCCGGTGGATGGGCATATCGCCGTAGTACTGGCGCGGGCTGGGCAGACGGTAAAACAAAGCGATCCTTTAC TGATGATGGTCGCTGATGATGCACAGTTACAGGTCGAATTGTTTGCCCCAAGCAAAGCGGTGGGGTTTATCAAGCCCCAG CAGCGAGTGGGGTTTATCAAGCCCCAGCAGCGAGTGGGGTTGCGCTTTGCCTCATTCCCCTATGAAAAGTTTGGCGTGCA GTATGGCGTCACCCGCGCCATAACCGACACCAGCCTCAGCGCCAGCGAGGCGTTGCTGCAAAACCCGATGGTGTGGAAGG AAAACGAAGGGCATTACCGCGTCATCGTAGCCTTGGATAAAACCACCATTACGGCCTATGGCCGACAGGAGCCGTTGCGA GTCGGCATGACCGTGTCTGCGGATGTGGAGCTGGACAGCCGCCGCCTGTACGAGTGGCTGCTGGAACCGTTATGGAGTCT GCAAGGAAGGATCTGA
Upstream 100 bases:
>100_bases GTCAATATATACCTCGGCGCAAGGATTGGTCCGTAAATGGAAGCGTCGCGGTCAGTAAGATGATTATCGACCTATAATGC CGATAAAGGTATAACCCCCA
Downstream 100 bases:
>100_bases ACATGGACGTTACCGAAGTGATTAACTGGGGATGGCGCAAGCGCCTGCCGTTGATTCGCCAAACGGAATCGGCGGAGTGC GGCGTGGCCTGTCTGGCGAT
Product: secretion protein HlyD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTGRPPQLYREGYFAAQATRAEGEVIIPASLSLTVYAWVSVLLVLAILLFLMLGEYTRKARLEGVVMPSSGLIKVVARSA GQVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASVSDSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQLNQELS SADAAMLLVQQQAKLSHSLMERYRKLIAKGYVSELEFQQQRMTLSTAQEKVELQRQAQLRLKRELAAAASELRTLEQQQQ GRDAELERQLQGIKQQKIELGAQRDHTLTAPVDGHIAVVLARAGQTVKQSDPLLMMVADDAQLQVELFAPSKAVGFIKPQ QRVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLSASEALLQNPMVWKENEGHYRVIVALDKTTITAYGRQEPLR VGMTVSADVELDSRRLYEWLLEPLWSLQGRI
Sequences:
>Translated_431_residues MTGRPPQLYREGYFAAQATRAEGEVIIPASLSLTVYAWVSVLLVLAILLFLMLGEYTRKARLEGVVMPSSGLIKVVARSA GQVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASVSDSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQLNQELS SADAAMLLVQQQAKLSHSLMERYRKLIAKGYVSELEFQQQRMTLSTAQEKVELQRQAQLRLKRELAAAASELRTLEQQQQ GRDAELERQLQGIKQQKIELGAQRDHTLTAPVDGHIAVVLARAGQTVKQSDPLLMMVADDAQLQVELFAPSKAVGFIKPQ QRVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLSASEALLQNPMVWKENEGHYRVIVALDKTTITAYGRQEPLR VGMTVSADVELDSRRLYEWLLEPLWSLQGRI >Mature_430_residues TGRPPQLYREGYFAAQATRAEGEVIIPASLSLTVYAWVSVLLVLAILLFLMLGEYTRKARLEGVVMPSSGLIKVVARSAG QVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASVSDSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQLNQELSS ADAAMLLVQQQAKLSHSLMERYRKLIAKGYVSELEFQQQRMTLSTAQEKVELQRQAQLRLKRELAAAASELRTLEQQQQG RDAELERQLQGIKQQKIELGAQRDHTLTAPVDGHIAVVLARAGQTVKQSDPLLMMVADDAQLQVELFAPSKAVGFIKPQQ RVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLSASEALLQNPMVWKENEGHYRVIVALDKTTITAYGRQEPLRV GMTVSADVELDSRRLYEWLLEPLWSLQGRI
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 48134; Mature: 48003
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRPPQLYREGYFAAQATRAEGEVIIPASLSLTVYAWVSVLLVLAILLFLMLGEYTRKA CCCCCHHHHHCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEGVVMPSSGLIKVVARSAGQVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASVS HHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH DSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQLNQELSSADAAMLLVQQQAKLSHSLM HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERYRKLIAKGYVSELEFQQQRMTLSTAQEKVELQRQAQLRLKRELAAAASELRTLEQQQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRDAELERQLQGIKQQKIELGAQRDHTLTAPVDGHIAVVLARAGQTVKQSDPLLMMVADD CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECC AQLQVELFAPSKAVGFIKPQQRVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLS CEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHCCCHHCCCHHHHCHHHCCHHHHCCCCCH ASEALLQNPMVWKENEGHYRVIVALDKTTITAYGRQEPLRVGMTVSADVELDSRRLYEWL HHHHHHHCCCCEECCCCCEEEEEEEECEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHH LEPLWSLQGRI HHHHHHHCCCC >Mature Secondary Structure TGRPPQLYREGYFAAQATRAEGEVIIPASLSLTVYAWVSVLLVLAILLFLMLGEYTRKA CCCCHHHHHCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEGVVMPSSGLIKVVARSAGQVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASVS HHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH DSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQLNQELSSADAAMLLVQQQAKLSHSLM HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERYRKLIAKGYVSELEFQQQRMTLSTAQEKVELQRQAQLRLKRELAAAASELRTLEQQQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRDAELERQLQGIKQQKIELGAQRDHTLTAPVDGHIAVVLARAGQTVKQSDPLLMMVADD CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECC AQLQVELFAPSKAVGFIKPQQRVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLS CEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHCCCHHCCCHHHHCHHHCCHHHHCCCCCH ASEALLQNPMVWKENEGHYRVIVALDKTTITAYGRQEPLRVGMTVSADVELDSRRLYEWL HHHHHHHCCCCEECCCCCEEEEEEEECEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHH LEPLWSLQGRI HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]