| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is dcp [H]
Identifier: 157370546
GI number: 157370546
Start: 2511495
End: 2513696
Strand: Direct
Name: dcp [H]
Synonym: Spro_2306
Alternate gene names: 157370546
Gene position: 2511495-2513696 (Clockwise)
Preceding gene: 157370542
Following gene: 157370552
Centisome position: 46.09
GC content: 54.59
Gene sequence:
>2202_bases ATGCGTTTATCGACATTGGTGTTGGCGATCGGCATGGCGCTGGGCACGCAGGCACAGGCAGCAGAAACCAACCCGCACGC GGATCATAGCGCGTTGCCAAGTGGCCAGGCGAAGGAGGCAACCGTGACCGGTGAAGCCAACCAACACGACAACAAAAAGA ACCAAAACCCGTTCTTCTATCAAAGCCGTCTGCCATTCCAGGCGCCGCCGTTCAATCTGATCAAAGAAAGTGATTATGCC CCGGCAATTGATGCGGGCATCAAGCAGAAACTGGAAGAGATTGAGAAGATTGCCAACAACCCGGCCAAGCCTGATTTTAA AAATACCTTTGTGGCAATGGAACAAAGCGGCGCGTTGCTGTCGCGAGTGATGAACGTCTTTGGCGCCATGACCTCGGCCA ACACCAGCGACGGGTTGCAAAAACTCGATGAGCAAAGCTCGCCGAAGCTGGCGGCGCTGGATGATGCCATCATGCTCAAC AGCAAGCTGTTTGCCCGTATCAAGGCCGTTTATCAACAGCGCGATGAGCTAAAACTGGATGCGGAATCGCGTCGGCTGGT TGAAGTGACCTACAAGAACTTTGAGCTGGCGGGGGCCAATCTGTCCGACGCCGATAAAACCAAACTTAAGGCGCTGAACC AGGAAGCGGCAACGCTGAGCACCCAGTTCTCCAACAAACTGCTGGCGGCGACCAAAGATGGCGCATTGGCGATCGCTGAC AAAGGCAATCTGGACGGCCTGTCGGAAAGCGAACTGGCGGCGGCGGCCCAGGCGGCCGGCGAACGCAAGCTGGATAAACA GTGGCTGCTGGTGTTGCAAAACACCACCCAACAGCCGGAATTGCAAAGCCTGAAAAACCGCGAGACCCGCAAGGCACTGT TTGATGCTTCGTGGAACCGTGCGGAAAAGGGCGACGCTAACGACACCCGTCAGACCATTGCTCGTCTGGCTAAAGTGCGT GCCGAGCAGGCCAAACTGCTGGGCTTCCCGAATTACGCGGCCTGGAAGCTGCAAAACCAGATGGCCAAAACCCCGGATGC GGCGCTGAGTTTTATGCGTAATATCGTTCCGGCGGCCACCGCGCGTGCCGAACGTGAAGCCAAAGATATTCAGGCGGTCA TCGACCAGCAGAAAGGCAATTTCAAGGTTGAAGCCTGGGATTGGCAGTTTTACGCTGAACAGGTGCGCAAAGCCAAATAT GACCTGGATGAGTCGCAGATCAAACCTTACTTCGAACTGGATAACGTGCTGAACAACGGCGTGTTCTATGCCGCCAACCT GCTGTACGGCATCAGTTTCAAAGAGCGCAAGGACATCCCGGTTTATCAGCCGGACGTGCGGGTTTATGAGGTGTTCGATA AAGACGGTAAATCATTGGCGCTGTTCTATACCGACTTCTTTAAGCGCGACAACAAGGGCGGTGGCGCCTGGATGAGCAAT TTTGTCGAACAATCGAAGCTGAAAGGCACCAAACCGGTAATTTACAACGTCGCCAACTTCACCAAACCGGCACCGGGCCA GCCTGCGTTGTTGTCGTACGATGACGTGATCACCATGTTCCACGAATTTGGTCATGCGCTGCACGGCATGTTCGCCGATC AGGAATATCCAAGCCTGTCCGGCACCAACACGGCCCGTGACTTCGTTGAGTTCCCATCGCAGTTTAACGAGCATTGGGCC AGCGATCCGAAAGTCTTTGCCCACTTCGCCAAGCATTACAAAACCGGTGAAGCCATGCCGCAGGAACTGGTCGACAAAAT CAAAAAGGCCGACAAGTTCAACAAAGGCTATGACATGACCGAGCTGCTTTCTGCGGCACTGCTGGACATGCACTGGCATA TGTTGAGCGCCGACCAGCCGCAGCAGGACGTGGACAAGTTCGAGGCGGAATCGCTGATGAAAGACAAAATCGATCTTAGC TATGTGCCGCCGCGCTATCGCTCCAGTTACTTCAAGCACATTTGGGGTAACGGCTATGCTGCCGGTTATTACGCCTATCT GTGGACAGAAATGCTGGCGGATGATGCGTTTCAGTGGTTCACCGAACATGGCGGCCTGACGGCAGAGAACGGCCAGCGTT TCCGCAATATGATCCTGTCGCGCGGTAACAGCCAGGATCTGGAAAAACTGTACATCGACTGGCGCGGCAAAGAGCCAAGC ATTGAGCCGATGCTGATTAACCGTGGCCTGAAAGACGAATAA
Upstream 100 bases:
>100_bases TTTTGCTCAATCTGCCAACTGCGCCTAAGCTAGGATGTGACTCAAGGGGAGATGAGCTCTCCGCGACATTATTCTGTGGA CATGGAGGAGTTTCGATTTG
Downstream 100 bases:
>100_bases CAGGTCATGGCATTAGCCTGGTGAGTAGTGATAAGAGGGCGTAAGAAATTACGCCCTCTTTATTTGTTATAAGCAGTTTG GTTGAGATTAAGGAGTGAAG
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MRLSTLVLAIGMALGTQAQAAETNPHADHSALPSGQAKEATVTGEANQHDNKKNQNPFFYQSRLPFQAPPFNLIKESDYA PAIDAGIKQKLEEIEKIANNPAKPDFKNTFVAMEQSGALLSRVMNVFGAMTSANTSDGLQKLDEQSSPKLAALDDAIMLN SKLFARIKAVYQQRDELKLDAESRRLVEVTYKNFELAGANLSDADKTKLKALNQEAATLSTQFSNKLLAATKDGALAIAD KGNLDGLSESELAAAAQAAGERKLDKQWLLVLQNTTQQPELQSLKNRETRKALFDASWNRAEKGDANDTRQTIARLAKVR AEQAKLLGFPNYAAWKLQNQMAKTPDAALSFMRNIVPAATARAEREAKDIQAVIDQQKGNFKVEAWDWQFYAEQVRKAKY DLDESQIKPYFELDNVLNNGVFYAANLLYGISFKERKDIPVYQPDVRVYEVFDKDGKSLALFYTDFFKRDNKGGGAWMSN FVEQSKLKGTKPVIYNVANFTKPAPGQPALLSYDDVITMFHEFGHALHGMFADQEYPSLSGTNTARDFVEFPSQFNEHWA SDPKVFAHFAKHYKTGEAMPQELVDKIKKADKFNKGYDMTELLSAALLDMHWHMLSADQPQQDVDKFEAESLMKDKIDLS YVPPRYRSSYFKHIWGNGYAAGYYAYLWTEMLADDAFQWFTEHGGLTAENGQRFRNMILSRGNSQDLEKLYIDWRGKEPS IEPMLINRGLKDE
Sequences:
>Translated_733_residues MRLSTLVLAIGMALGTQAQAAETNPHADHSALPSGQAKEATVTGEANQHDNKKNQNPFFYQSRLPFQAPPFNLIKESDYA PAIDAGIKQKLEEIEKIANNPAKPDFKNTFVAMEQSGALLSRVMNVFGAMTSANTSDGLQKLDEQSSPKLAALDDAIMLN SKLFARIKAVYQQRDELKLDAESRRLVEVTYKNFELAGANLSDADKTKLKALNQEAATLSTQFSNKLLAATKDGALAIAD KGNLDGLSESELAAAAQAAGERKLDKQWLLVLQNTTQQPELQSLKNRETRKALFDASWNRAEKGDANDTRQTIARLAKVR AEQAKLLGFPNYAAWKLQNQMAKTPDAALSFMRNIVPAATARAEREAKDIQAVIDQQKGNFKVEAWDWQFYAEQVRKAKY DLDESQIKPYFELDNVLNNGVFYAANLLYGISFKERKDIPVYQPDVRVYEVFDKDGKSLALFYTDFFKRDNKGGGAWMSN FVEQSKLKGTKPVIYNVANFTKPAPGQPALLSYDDVITMFHEFGHALHGMFADQEYPSLSGTNTARDFVEFPSQFNEHWA SDPKVFAHFAKHYKTGEAMPQELVDKIKKADKFNKGYDMTELLSAALLDMHWHMLSADQPQQDVDKFEAESLMKDKIDLS YVPPRYRSSYFKHIWGNGYAAGYYAYLWTEMLADDAFQWFTEHGGLTAENGQRFRNMILSRGNSQDLEKLYIDWRGKEPS IEPMLINRGLKDE >Mature_733_residues MRLSTLVLAIGMALGTQAQAAETNPHADHSALPSGQAKEATVTGEANQHDNKKNQNPFFYQSRLPFQAPPFNLIKESDYA PAIDAGIKQKLEEIEKIANNPAKPDFKNTFVAMEQSGALLSRVMNVFGAMTSANTSDGLQKLDEQSSPKLAALDDAIMLN SKLFARIKAVYQQRDELKLDAESRRLVEVTYKNFELAGANLSDADKTKLKALNQEAATLSTQFSNKLLAATKDGALAIAD KGNLDGLSESELAAAAQAAGERKLDKQWLLVLQNTTQQPELQSLKNRETRKALFDASWNRAEKGDANDTRQTIARLAKVR AEQAKLLGFPNYAAWKLQNQMAKTPDAALSFMRNIVPAATARAEREAKDIQAVIDQQKGNFKVEAWDWQFYAEQVRKAKY DLDESQIKPYFELDNVLNNGVFYAANLLYGISFKERKDIPVYQPDVRVYEVFDKDGKSLALFYTDFFKRDNKGGGAWMSN FVEQSKLKGTKPVIYNVANFTKPAPGQPALLSYDDVITMFHEFGHALHGMFADQEYPSLSGTNTARDFVEFPSQFNEHWA SDPKVFAHFAKHYKTGEAMPQELVDKIKKADKFNKGYDMTELLSAALLDMHWHMLSADQPQQDVDKFEAESLMKDKIDLS YVPPRYRSSYFKHIWGNGYAAGYYAYLWTEMLADDAFQWFTEHGGLTAENGQRFRNMILSRGNSQDLEKLYIDWRGKEPS IEPMLINRGLKDE
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=668, Percent_Identity=25.2994011976048, Blast_Score=227, Evalue=4e-59, Organism=Homo sapiens, GI14149738, Length=602, Percent_Identity=27.2425249169435, Blast_Score=202, Evalue=9e-52, Organism=Homo sapiens, GI156105687, Length=745, Percent_Identity=22.9530201342282, Blast_Score=164, Evalue=4e-40, Organism=Escherichia coli, GI1787819, Length=675, Percent_Identity=63.5555555555556, Blast_Score=877, Evalue=0.0, Organism=Escherichia coli, GI1789913, Length=676, Percent_Identity=32.6923076923077, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565901, Length=584, Percent_Identity=21.5753424657534, Blast_Score=86, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71999758, Length=604, Percent_Identity=20.5298013245033, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319793, Length=702, Percent_Identity=24.9287749287749, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322715, Length=736, Percent_Identity=21.6032608695652, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI21356111, Length=551, Percent_Identity=25.2268602540835, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI20129717, Length=415, Percent_Identity=26.0240963855422, Blast_Score=143, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 82545; Mature: 82545
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSTLVLAIGMALGTQAQAAETNPHADHSALPSGQAKEATVTGEANQHDNKKNQNPFFY CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEE QSRLPFQAPPFNLIKESDYAPAIDAGIKQKLEEIEKIANNPAKPDFKNTFVAMEQSGALL ECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEHHCCHHH SRVMNVFGAMTSANTSDGLQKLDEQSSPKLAALDDAIMLNSKLFARIKAVYQQRDELKLD HHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AESRRLVEVTYKNFELAGANLSDADKTKLKALNQEAATLSTQFSNKLLAATKDGALAIAD CCCCEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEC KGNLDGLSESELAAAAQAAGERKLDKQWLLVLQNTTQQPELQSLKNRETRKALFDASWNR CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC AEKGDANDTRQTIARLAKVRAEQAKLLGFPNYAAWKLQNQMAKTPDAALSFMRNIVPAAT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ARAEREAKDIQAVIDQQKGNFKVEAWDWQFYAEQVRKAKYDLDESQIKPYFELDNVLNNG HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCC VFYAANLLYGISFKERKDIPVYQPDVRVYEVFDKDGKSLALFYTDFFKRDNKGGGAWMSN HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCCCHHHHHH FVEQSKLKGTKPVIYNVANFTKPAPGQPALLSYDDVITMFHEFGHALHGMFADQEYPSLS HHHHHHCCCCCCEEEEHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC GTNTARDFVEFPSQFNEHWASDPKVFAHFAKHYKTGEAMPQELVDKIKKADKFNKGYDMT CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH ELLSAALLDMHWHMLSADQPQQDVDKFEAESLMKDKIDLSYVPPRYRSSYFKHIWGNGYA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCH AGYYAYLWTEMLADDAFQWFTEHGGLTAENGQRFRNMILSRGNSQDLEKLYIDWRGKEPS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEEECCCCCC IEPMLINRGLKDE CCHHHCCCCCCCC >Mature Secondary Structure MRLSTLVLAIGMALGTQAQAAETNPHADHSALPSGQAKEATVTGEANQHDNKKNQNPFFY CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEE QSRLPFQAPPFNLIKESDYAPAIDAGIKQKLEEIEKIANNPAKPDFKNTFVAMEQSGALL ECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEHHCCHHH SRVMNVFGAMTSANTSDGLQKLDEQSSPKLAALDDAIMLNSKLFARIKAVYQQRDELKLD HHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AESRRLVEVTYKNFELAGANLSDADKTKLKALNQEAATLSTQFSNKLLAATKDGALAIAD CCCCEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEC KGNLDGLSESELAAAAQAAGERKLDKQWLLVLQNTTQQPELQSLKNRETRKALFDASWNR CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC AEKGDANDTRQTIARLAKVRAEQAKLLGFPNYAAWKLQNQMAKTPDAALSFMRNIVPAAT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ARAEREAKDIQAVIDQQKGNFKVEAWDWQFYAEQVRKAKYDLDESQIKPYFELDNVLNNG HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCC VFYAANLLYGISFKERKDIPVYQPDVRVYEVFDKDGKSLALFYTDFFKRDNKGGGAWMSN HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCCCHHHHHH FVEQSKLKGTKPVIYNVANFTKPAPGQPALLSYDDVITMFHEFGHALHGMFADQEYPSLS HHHHHHCCCCCCEEEEHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC GTNTARDFVEFPSQFNEHWASDPKVFAHFAKHYKTGEAMPQELVDKIKKADKFNKGYDMT CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH ELLSAALLDMHWHMLSADQPQQDVDKFEAESLMKDKIDLSYVPPRYRSSYFKHIWGNGYA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCH AGYYAYLWTEMLADDAFQWFTEHGGLTAENGQRFRNMILSRGNSQDLEKLYIDWRGKEPS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEEECCCCCC IEPMLINRGLKDE CCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]