| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is manA [H]
Identifier: 157370517
GI number: 157370517
Start: 2479245
End: 2480423
Strand: Reverse
Name: manA [H]
Synonym: Spro_2277
Alternate gene names: 157370517
Gene position: 2480423-2479245 (Counterclockwise)
Preceding gene: 157370520
Following gene: 157370516
Centisome position: 45.52
GC content: 57.93
Gene sequence:
>1179_bases ATGCAAAAAATGACCAACGCAGTGCAAAACTATGCATGGGGCAGCCACGACGCGTTAACCCGGCTTTATGGCATCGCCAA CCCACAAGGGCAGCCGATGGCGGAGCTGTGGATGGGCGCTCATCCGAAAAGCAGCTCCCGTGTGGCCGGTGCCGACGGTA ATTTGCGCTCGTTGCGCGACGTGATTGATGAAGATCAGCCCAAACAACTGGGTGCCGACGTTGCCCGCCGCTTTGGTGAA TTGCCATTCCTGTTCAAGGTGCTGTGTGCCGACCAGCCGCTGTCTATTCAGGTGCACCCAAGCAAATCGGCCGCAGAAAC CGGTTTTGCCAAAGAAAACGCCGCCGGTATTCCCCTGGACGCGGCTGAACGCAACTATAAAGATCCTAACCACAAGCCGG AGCTGGTGTTCGCCCTGACGCCTTTCCTGGCGATGAATGGCTTCCGCGAACTGTCCGACATTGTTTCCCTGCTGCAGCCG ATCGCCGGAGCCCATCATGATATCGCCGCCTTCCTGCAACAGCCGGATGTCAGCCATCTGTCGTCCCTGTTTGCCAGCCT GCTGGCGATGAGCGGCGAACAGAAATCGCTGGCGCTGGGCGTGCTGAAGGCCGCACTGAATAACCAACAGGGTGAAACCT GGGACACGATTCGCTTTATCGCCGGTTTTTATCCGGACGACAGCGGCCTGTTCTCGCCGCTGCTGCTGAACGTGGTACAG CTCCAACCGGGTGAAGCGATGTTCCTGTATGCCGAAACGCCGCATGCCTACCTGAAGGGCGTGGCGCTGGAAGTAATGGC TAACTCGGACAACGTGCTGCGTGCCGGTCTGACACCTAAATTCATCGATATTCCAGAACTGTTAGCCAACCTGCAGTTCC GTCCACAGCCGGCATCCGGCCTGCTGACTCAGCCGCAAAAGCGCGGTGACGAACTGTTCTTCCCGATCCCGGTTGAAGAC TTCGCCTTCTCACTGCATGACCTTTCCGCCGCCCCACAGGCGCTGGCGCAAAATAGCGCGGCCATTGTGTTCTGCGTTGA AGGTGAAGCGGTCTTAACCAAACAGGATCAGCAACTGGTGCTCAAGCCGGGTGAATCCTGCTTTATCGGCGCGTTCGAAT CGCCGGTCAACGTCAGTGGCAGCGGCCGAATCGCCCGCGTTTATAACCTGTTGTCGTAA
Upstream 100 bases:
>100_bases CGCTTCCACGCCACAGTTCGCGTGTAGGATAAGGCGCACAAGGTTTTTAACAGTCAGCTACTACCGCCCCTGGCGGCGAA CGCAAAGGATGTTTATCAAG
Downstream 100 bases:
>100_bases ACACTCGGTAAATTTCCGCAAATTGGTTGCTGAAAGAGTGGCTTACCTTCACAATTAAACGCCTGCGGGTAAACGCCTGC CGGCGTTTTTTATTGGCCCA
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MQKMTNAVQNYAWGSHDALTRLYGIANPQGQPMAELWMGAHPKSSSRVAGADGNLRSLRDVIDEDQPKQLGADVARRFGE LPFLFKVLCADQPLSIQVHPSKSAAETGFAKENAAGIPLDAAERNYKDPNHKPELVFALTPFLAMNGFRELSDIVSLLQP IAGAHHDIAAFLQQPDVSHLSSLFASLLAMSGEQKSLALGVLKAALNNQQGETWDTIRFIAGFYPDDSGLFSPLLLNVVQ LQPGEAMFLYAETPHAYLKGVALEVMANSDNVLRAGLTPKFIDIPELLANLQFRPQPASGLLTQPQKRGDELFFPIPVED FAFSLHDLSAAPQALAQNSAAIVFCVEGEAVLTKQDQQLVLKPGESCFIGAFESPVNVSGSGRIARVYNLLS
Sequences:
>Translated_392_residues MQKMTNAVQNYAWGSHDALTRLYGIANPQGQPMAELWMGAHPKSSSRVAGADGNLRSLRDVIDEDQPKQLGADVARRFGE LPFLFKVLCADQPLSIQVHPSKSAAETGFAKENAAGIPLDAAERNYKDPNHKPELVFALTPFLAMNGFRELSDIVSLLQP IAGAHHDIAAFLQQPDVSHLSSLFASLLAMSGEQKSLALGVLKAALNNQQGETWDTIRFIAGFYPDDSGLFSPLLLNVVQ LQPGEAMFLYAETPHAYLKGVALEVMANSDNVLRAGLTPKFIDIPELLANLQFRPQPASGLLTQPQKRGDELFFPIPVED FAFSLHDLSAAPQALAQNSAAIVFCVEGEAVLTKQDQQLVLKPGESCFIGAFESPVNVSGSGRIARVYNLLS >Mature_392_residues MQKMTNAVQNYAWGSHDALTRLYGIANPQGQPMAELWMGAHPKSSSRVAGADGNLRSLRDVIDEDQPKQLGADVARRFGE LPFLFKVLCADQPLSIQVHPSKSAAETGFAKENAAGIPLDAAERNYKDPNHKPELVFALTPFLAMNGFRELSDIVSLLQP IAGAHHDIAAFLQQPDVSHLSSLFASLLAMSGEQKSLALGVLKAALNNQQGETWDTIRFIAGFYPDDSGLFSPLLLNVVQ LQPGEAMFLYAETPHAYLKGVALEVMANSDNVLRAGLTPKFIDIPELLANLQFRPQPASGLLTQPQKRGDELFFPIPVED FAFSLHDLSAAPQALAQNSAAIVFCVEGEAVLTKQDQQLVLKPGESCFIGAFESPVNVSGSGRIARVYNLLS
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=406, Percent_Identity=37.192118226601, Blast_Score=212, Evalue=5e-55, Organism=Escherichia coli, GI1787899, Length=391, Percent_Identity=74.6803069053708, Blast_Score=598, Evalue=1e-172, Organism=Caenorhabditis elegans, GI71997620, Length=397, Percent_Identity=31.7380352644836, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17557650, Length=421, Percent_Identity=26.3657957244656, Blast_Score=134, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6320839, Length=412, Percent_Identity=30.8252427184466, Blast_Score=166, Evalue=6e-42, Organism=Drosophila melanogaster, GI21356061, Length=377, Percent_Identity=31.0344827586207, Blast_Score=151, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42461; Mature: 42461
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00965 PMI_I_1 ; PS00966 PMI_I_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKMTNAVQNYAWGSHDALTRLYGIANPQGQPMAELWMGAHPKSSSRVAGADGNLRSLRD CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHH VIDEDQPKQLGADVARRFGELPFLFKVLCADQPLSIQVHPSKSAAETGFAKENAAGIPLD HHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCC AAERNYKDPNHKPELVFALTPFLAMNGFRELSDIVSLLQPIAGAHHDIAAFLQQPDVSHL HHHCCCCCCCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH SSLFASLLAMSGEQKSLALGVLKAALNNQQGETWDTIRFIAGFYPDDSGLFSPLLLNVVQ HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQPGEAMFLYAETPHAYLKGVALEVMANSDNVLRAGLTPKFIDIPELLANLQFRPQPASG CCCCCEEEEEECCCHHHHCCEEEEEEECCCCEEEECCCCCEECHHHHHHCCCCCCCCCCC LLTQPQKRGDELFFPIPVEDFAFSLHDLSAAPQALAQNSAAIVFCVEGEAVLTKQDQQLV CCCCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCEEE LKPGESCFIGAFESPVNVSGSGRIARVYNLLS ECCCCCEEEECCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MQKMTNAVQNYAWGSHDALTRLYGIANPQGQPMAELWMGAHPKSSSRVAGADGNLRSLRD CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEECCCCCHHHHHH VIDEDQPKQLGADVARRFGELPFLFKVLCADQPLSIQVHPSKSAAETGFAKENAAGIPLD HHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCC AAERNYKDPNHKPELVFALTPFLAMNGFRELSDIVSLLQPIAGAHHDIAAFLQQPDVSHL HHHCCCCCCCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH SSLFASLLAMSGEQKSLALGVLKAALNNQQGETWDTIRFIAGFYPDDSGLFSPLLLNVVQ HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQPGEAMFLYAETPHAYLKGVALEVMANSDNVLRAGLTPKFIDIPELLANLQFRPQPASG CCCCCEEEEEECCCHHHHCCEEEEEEECCCCEEEECCCCCEECHHHHHHCCCCCCCCCCC LLTQPQKRGDELFFPIPVEDFAFSLHDLSAAPQALAQNSAAIVFCVEGEAVLTKQDQQLV CCCCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCEEE LKPGESCFIGAFESPVNVSGSGRIARVYNLLS ECCCCCEEEECCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1879695; 11677609 [H]