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The map label for this gene is slyB [H]

Identifier: 157370455

GI number: 157370455

Start: 2416447

End: 2416938

Strand: Reverse

Name: slyB [H]

Synonym: Spro_2215

Alternate gene names: 157370455

Gene position: 2416938-2416447 (Counterclockwise)

Preceding gene: 157370461

Following gene: 157370453

Centisome position: 44.36

GC content: 58.74

Gene sequence:

>492_bases
ATGGACTACTACCAACAGGAGTTTTATATGATCAAGCGTCTTCTCGTCGTTGCCATCGCCGCAGTTACGCTGGCAGGGTG
CGCCAATGATTCCATGTCCGGCGACGTTTATTCCGCTTCGCAGGCCAAACAGGTGCAAACCGTGACTTACGGCACGCTGG
TTTCTGTGCGCCCGGTCAAGATCCAGGGTAGTGAAACATCGAACACCATTGGTGCCATCGGCGGTGCCGTGCTGGGTGGT
TTCCTCGGTAACACCGTCGGCGGCGGCACAGGCCGTAGCCTGGCGACGGCAGCCGGCGCTGTAGCAGGCGGCGTAGCAGG
TAACAGCATCGGTGAAGCTGCCGGTCGTACTTCAGGCTATGAGCTGGAAATCAAGACCGACCAGAAAGAGAACATCGTGG
TGGTTCAGAAGGCGGGCGACACCAAGTTCAGCCCAGGGCAACGCGTTCGTATGGCTCGCACTGGCGACACCATCACCGTG
TCCCCACTGTAA

Upstream 100 bases:

>100_bases
CTAAGCTGCGTGCAGTAGCGGGTTATGGTGATATGCGTGCGTTTAAGCCATACTTTGTCTATCATTTTTATGAATCTGGC
CTGGTAAGGTTTCCCAGGTT

Downstream 100 bases:

>100_bases
GCTGAACTTAGCGGGTAAAACCGGAGGCTTTAGGCCTCCGGTTTCATTTCCGATGCTGTGAAATCTAATCGTATAAAGAA
GAAGTTCTTATTGTTTATTT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDYYQQEFYMIKRLLVVAIAAVTLAGCANDSMSGDVYSASQAKQVQTVTYGTLVSVRPVKIQGSETSNTIGAIGGAVLGG
FLGNTVGGGTGRSLATAAGAVAGGVAGNSIGEAAGRTSGYELEIKTDQKENIVVVQKAGDTKFSPGQRVRMARTGDTITV
SPL

Sequences:

>Translated_163_residues
MDYYQQEFYMIKRLLVVAIAAVTLAGCANDSMSGDVYSASQAKQVQTVTYGTLVSVRPVKIQGSETSNTIGAIGGAVLGG
FLGNTVGGGTGRSLATAAGAVAGGVAGNSIGEAAGRTSGYELEIKTDQKENIVVVQKAGDTKFSPGQRVRMARTGDTITV
SPL
>Mature_163_residues
MDYYQQEFYMIKRLLVVAIAAVTLAGCANDSMSGDVYSASQAKQVQTVTYGTLVSVRPVKIQGSETSNTIGAIGGAVLGG
FLGNTVGGGTGRSLATAAGAVAGGVAGNSIGEAAGRTSGYELEIKTDQKENIVVVQKAGDTKFSPGQRVRMARTGDTITV
SPL

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=154, Percent_Identity=67.5324675324675, Blast_Score=181, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 16640; Mature: 16640

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYYQQEFYMIKRLLVVAIAAVTLAGCANDSMSGDVYSASQAKQVQTVTYGTLVSVRPVK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECEEEEEEEEE
IQGSETSNTIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGNSIGEAAGRTSGY
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCE
ELEIKTDQKENIVVVQKAGDTKFSPGQRVRMARTGDTITVSPL
EEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MDYYQQEFYMIKRLLVVAIAAVTLAGCANDSMSGDVYSASQAKQVQTVTYGTLVSVRPVK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECEEEEEEEEE
IQGSETSNTIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGNSIGEAAGRTSGY
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCE
ELEIKTDQKENIVVVQKAGDTKFSPGQRVRMARTGDTITVSPL
EEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]